-
1
-
-
0022786956
-
Fish oil, Raynaud's syndrome, and undiscovered public knowledge
-
Swanson D (1986) Fish oil, Raynaud's syndrome, and undiscovered public knowledge. Perspect Biol Med 30: 7-18.
-
(1986)
Perspect Biol Med
, vol.30
, pp. 7-18
-
-
Swanson, D.1
-
2
-
-
21144462294
-
Intervening in the life cycles of scientific knowledge
-
Swanson DR (1993) Intervening in the life cycles of scientific knowledge. Libr Trends 41(4): 606-631.
-
(1993)
Libr Trends
, vol.41
, Issue.4
, pp. 606-631
-
-
Swanson, D.R.1
-
3
-
-
0031125707
-
An interactive system for finding complementary literatures
-
Swanson DR, Smalheiser NR (1997) An interactive system for finding complementary literatures. Artif Intell 91: 183-203.
-
(1997)
Artif Intell
, vol.91
, pp. 183-203
-
-
Swanson, D.R.1
Smalheiser, N.R.2
-
4
-
-
6344276917
-
Mining MEDLINE for implicit links between dietary substances and diseases
-
DOI 10.1093/bioinformatics/bth914
-
Srinivasan P, Libbus B (2004) Mining MEDLINE for implicit links between dietary substances and diseases. Bioinformatics 20 (suppl 1): i290-i296. (Pubitemid 41296701)
-
(2004)
Bioinformatics
, vol.20
, Issue.SUPPL. 1
-
-
Srinivasan, P.1
Libbus, B.2
-
5
-
-
13444278595
-
Using literature-based discovery to identify disease candidate genes
-
DOI 10.1016/j.ijmedinf.2004.04.024, PII S1386505604001650, MIE 2003
-
Hristovski D, Peterlin B, Mitchell JA, Humphrey SM (2005) Using literature-based discovery to identify disease candidate genes. Int J Med Inform 74(2): 289-298. (Pubitemid 40208459)
-
(2005)
International Journal of Medical Informatics
, vol.74
, Issue.2-4
, pp. 289-298
-
-
Hristovski, D.1
Peterlin, B.2
Mitchell, J.A.3
Humphrey, S.M.4
-
6
-
-
36348990139
-
Frontiers of biomedical text mining: Current progress
-
DOI 10.1093/bib/bbm045, Special Issue: Current Progress in Bioinformatics: 2007
-
Zweigenbaum P, Demner-Fushman D, Yu H, Cohen KB (2007) Frontiers of biomedical text mining: current progress. Brief Bioinform 8(5): 358-375. (Pubitemid 350142624)
-
(2007)
Briefings in Bioinformatics
, vol.8
, Issue.5
, pp. 358-375
-
-
Zweigenbaum, P.1
Demner-fushman, D.2
Yu, H.3
Cohen, K.B.4
-
7
-
-
46149102929
-
Seeking a New Biology through Text Mining
-
DOI 10.1016/j.cell.2008.06.029, PII S0092867408008167
-
Rzhetsky A, Seringhaus M, Gerstein M (2008) Seeking a new biology through text mining. Cell 134(1): 9-13. (Pubitemid 351905746)
-
(2008)
Cell
, vol.134
, Issue.1
, pp. 9-13
-
-
Rzhetsky, A.1
Seringhaus, M.2
Gerstein, M.3
-
8
-
-
33645841072
-
Status of text-mining techniques applied to biomedical text
-
Erhardt RA, Schneider R, Blaschke C (2006) Status of text-mining techniques applied to biomedical text. Drug Discov Today 11(7): 315-325.
-
(2006)
Drug Discov Today
, vol.11
, Issue.7
, pp. 315-325
-
-
Erhardt, R.A.1
Schneider, R.2
Blaschke, C.3
-
9
-
-
79960766975
-
Literature mining, ontologies and information visualization for drug repurposing
-
Andronis C, Sharma A, Virvilis V, Deftereos S, Persidis A (2011) Literature mining, ontologies and information visualization for drug repurposing. Brief Bioinform 12(4): 357-368.
-
(2011)
Brief Bioinform
, vol.12
, Issue.4
, pp. 357-368
-
-
Andronis, C.1
Sharma, A.2
Virvilis, V.3
Deftereos, S.4
Persidis, A.5
-
10
-
-
84860674656
-
Systems chemical biology and the Semantic Web: What they mean for the future of drug discovery research
-
Wild DJ, Ding Y, Sheth AP, Harland L, Gifford EM, et al. (2012) Systems chemical biology and the Semantic Web: what they mean for the future of drug discovery research. Drug Discov Today 17(9): 469-474.
-
(2012)
Drug Discov Today
, vol.17
, Issue.9
, pp. 469-474
-
-
Wild, D.J.1
Ding, Y.2
Sheth, A.P.3
Harland, L.4
Gifford, E.M.5
-
11
-
-
31144432293
-
Literature mining for the biologist: From information retrieval to biological discovery
-
DOI 10.1038/nrg1768, PII NRG1768
-
Jensen LJ, Saric J, Bork P (2006) Literature mining for the biologist: from information retrieval to biological discovery. Nat Rev Genet 7(2): 119-129. (Pubitemid 43128897)
-
(2006)
Nature Reviews Genetics
, vol.7
, Issue.2
, pp. 119-129
-
-
Jensen, L.J.1
Saric, J.2
Bork, P.3
-
12
-
-
84869505278
-
Text-mining solutions for biomedical research: Enabling integrative biology
-
Rebholz-Schuhmann D, Oellrich A, Hoehndorf R (2012) Text-mining solutions for biomedical research: enabling integrative biology. Nat Rev Genet 13(12):829-839.
-
(2012)
Nat Rev Genet
, vol.13
, Issue.12
, pp. 829-839
-
-
Rebholz-Schuhmann, D.1
Oellrich, A.2
Hoehndorf, R.3
-
14
-
-
38949105955
-
Getting started in text mining
-
Cohen KB, Hunter L (2008). Getting started in text mining. PLOS Comput Biol 4(1): e20.
-
(2008)
PLOS Comput Biol
, vol.4
, Issue.1
-
-
Cohen, K.B.1
Hunter, L.2
-
16
-
-
58149365542
-
Toward Principles for the Design of Ontologies Used for Knowledge Sharing
-
Gruber T (1995) Toward Principles for the Design of Ontologies Used for Knowledge Sharing. Int J Hum-Comput St 43(5-6): 907-928.
-
(1995)
Int J Hum-Comput St
, vol.43
, Issue.5-6
, pp. 907-928
-
-
Gruber, T.1
-
24
-
-
84897535843
-
The Distributional Hypothesis
-
Sahlgren M (2008) The Distributional Hypothesis. Riv Linguist 20 (1):33-53.
-
(2008)
Riv Linguist
, vol.20
, Issue.1
, pp. 33-53
-
-
Sahlgren, M.1
-
26
-
-
13444278595
-
Using literature-based discovery to identify disease candidate genes
-
DOI 10.1016/j.ijmedinf.2004.04.024, PII S1386505604001650, MIE 2003
-
Hristovski D, Peterlin B, Mitchell JA, Humphrey SM (2005) Using literature-based discovery to identify disease candidate genes. Int J Med Inform, 74(2): 289-298. (Pubitemid 40208459)
-
(2005)
International Journal of Medical Informatics
, vol.74
, Issue.2-4
, pp. 289-298
-
-
Hristovski, D.1
Peterlin, B.2
Mitchell, J.A.3
Humphrey, S.M.4
-
27
-
-
33750742458
-
Using statistical and knowledge-based approaches for literature-based discovery
-
DOI 10.1016/j.jbi.2005.11.010, PII S153204640500136X
-
Yetisgen-Yildiz M, Pratt W (2006) Using statistical and knowledge-based approaches for literature-based discovery. J Biomed Inform 39(6): 600-611. (Pubitemid 44709660)
-
(2006)
Journal of Biomedical Informatics
, vol.39
, Issue.6
, pp. 600-611
-
-
Yetisgen-Yildiz, M.1
Pratt, W.2
-
28
-
-
78049427383
-
Literature mining for the discovery of hidden connections between drugs, genes and diseases
-
Frijters R, van Vugt M, Smeets R, van Schaik R, de Vlieg J, et al. (2010) Literature mining for the discovery of hidden connections between drugs, genes and diseases. PLOS Comput Biol 6(9): e1000943.
-
(2010)
PLOS Comput Biol
, vol.6
, Issue.9
-
-
Frijters, R.1
Van Vugt, M.2
Smeets, R.3
Van Schaik, R.4
De Vlieg, J.5
-
29
-
-
84861647877
-
Cheminformatic/bioinformatic analysis of large corporate databases: Application to drug repurposing
-
Loging W, Rodriguez-Esteban R, Hill J, Freeman T, Miglietta J (2012) Cheminformatic/bioinformatic analysis of large corporate databases: Application to drug repurposing. Drug Discov Today Ther Strateg 8(3): 109-116.
-
(2012)
Drug Discov Today Ther Strateg
, vol.8
, Issue.3
, pp. 109-116
-
-
Loging, W.1
Rodriguez-Esteban, R.2
Hill, J.3
Freeman, T.4
Miglietta, J.5
-
30
-
-
84862168456
-
Literature analysis for systematic drug repurposing: A case study from Biovista
-
Lekka E, Deftereos SN, Persidis A, Persidis A, Andronis C (2012) Literature analysis for systematic drug repurposing: a case study from Biovista. Drug Discov Today Ther Strateg 8(3): 103-108.
-
(2012)
Drug Discov Today Ther Strateg
, vol.8
, Issue.3
, pp. 103-108
-
-
Lekka, E.1
Deftereos, S.N.2
Persidis, A.3
Persidis, A.4
Andronis, C.5
-
32
-
-
41349107398
-
OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression
-
Hunter L, Lu Z, Firby J, Baumgartner WA, Johnson HL, et al. (2008) OpenDMAP: an open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression. BMC bioinformatics 9(1): 78.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.1
, pp. 78
-
-
Hunter, L.1
Lu, Z.2
Firby, J.3
Baumgartner, W.A.4
Johnson, H.L.5
-
33
-
-
44649178742
-
New challenges for text mining: Mapping between text and manually curated pathways
-
Oda K, Kim JD, Ohta T, Okanohara D, Matsuzaki T, et al. (2008) New challenges for text mining: mapping between text and manually curated pathways. BMC bioinformatics (suppl 3): S5.
-
(2008)
BMC Bioinformatics
, Issue.SUPPL. 3
-
-
Oda, K.1
Kim, J.D.2
Ohta, T.3
Okanohara, D.4
Matsuzaki, T.5
-
34
-
-
84860538817
-
Beyond the clause: Extraction of phosphorylation information from medline abstracts
-
DOI 10.1093/bioinformatics/bti1011
-
Narayanaswamy M, Ravikumar KE, Vijay-Shanker K (2005) Beyond the clause: extraction of phosphorylation information from medline abstracts. Bioinformatics (suppl 1): i319-i327. (Pubitemid 41794504)
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL. 1
-
-
Narayanaswamy, M.1
Ravikumar, K.E.2
Vijay-Shanker, K.3
-
35
-
-
33745611541
-
An online literature mining tool for protein phosphorylation
-
DOI 10.1093/bioinformatics/btl159
-
Yuan X, Hu ZZ, Wu HT, Torii M, Narayanaswamy M, et al. (2006) An online literature mining tool for protein phosphorylation. Bioinformatics 22(13): 1668-1669. (Pubitemid 43985305)
-
(2006)
Bioinformatics
, vol.22
, Issue.13
, pp. 1668-1669
-
-
Yuan, X.1
Hu, Z.Z.2
Wu, H.T.3
Torii, M.4
Narayanaswamy, M.5
Ravikumar, K.E.6
Vijay-Shanker, K.7
Wu, C.H.8
-
36
-
-
19944402951
-
Large-scale extraction of gene regulation for model organisms in an ontological context
-
Saric J, Jensen LJ, Rojas I (2005) Large-scale extraction of gene regulation for model organisms in an ontological context. In Silico Biol 5(1): 21-32. (Pubitemid 40753623)
-
(2005)
In Silico Biology
, vol.5
, Issue.1
, pp. 21-32
-
-
Saric, J.1
Jensen, L.J.2
Rojas, I.3
-
38
-
-
61949087310
-
Word sense disambiguation: A survey
-
Navigli R (2009) Word sense disambiguation: A survey. ACM Comput Surv 41(2): 10.
-
(2009)
ACM Comput Surv
, vol.41
, Issue.2
, pp. 10
-
-
Navigli, R.1
-
39
-
-
0042777233
-
Network Landscape from a Brownian particle's perspective
-
Zhou H (2003) Network Landscape from a Brownian particle's perspective. Phys. Rev. E 67:041908.
-
(2003)
Phys. Rev. E
, vol.67
, pp. 041908
-
-
Zhou, H.1
-
40
-
-
0031661150
-
Sarcoidosis: Immunopathogenetic concepts and their clinical application
-
Müller-Quernheim J (1998) Sarcoidosis: immunopathogenetic concepts and their clinical application. Eur Respir J 12(3): 716-738.
-
(1998)
Eur Respir J
, vol.12
, Issue.3
, pp. 716-738
-
-
Müller-Quernheim, J.1
-
41
-
-
33845900208
-
Regulation of immune tolerance by anti-inflammatory neuropeptides
-
DOI 10.1038/nri1984, PII NRI1984
-
Gonzalez-Rey E, Chorny A, Delgado M (2007) Regulation of immune tolerance by anti-inflammatory neuropeptides. Nature Rev Immunol 7:52-63. (Pubitemid 46020827)
-
(2007)
Nature Reviews Immunology
, vol.7
, Issue.1
, pp. 52-63
-
-
Gonzalez-Rey, E.1
Chorny, A.2
Delgado, M.3
-
42
-
-
34347252289
-
Up-regulation of MET Expression by alpha-Melanocyte-stimulating Hormone and MITF Allows Hepatocyte Growth Factor to Protect Melanocytes and Melanoma Cells from Apoptosis
-
Beuret L, Flori E, Denoyelle C, Bille K, Busca R, et al. (2007) Up-regulation of MET Expression by alpha-Melanocyte-stimulating Hormone and MITF Allows Hepatocyte Growth Factor to Protect Melanocytes and Melanoma Cells from Apoptosis. J Biol Chem 282(19): 14140-1414
-
(2007)
J Biol Chem
, vol.282
, Issue.19
, pp. 14140-21414
-
-
Beuret, L.1
Flori, E.2
Denoyelle, C.3
Bille, K.4
Busca, R.5
-
43
-
-
33645966183
-
Correlation of Epstein-Barr virus and its encoded proteins with Helicobacter pylori and expression of c-met and c-myc in gastric carcinoma
-
Luo B, Wang Y, Wang XF, Gao Y, Huang BH, et al. (2006) Correlation of Epstein-Barr virus and its encoded proteins with Helicobacter pylori and expression of c-met and c-myc in gastric carcinoma. World J of Gastroenterol 12(12): 1842-1848.
-
(2006)
World J of Gastroenterol
, vol.12
, Issue.12
, pp. 1842-1848
-
-
Luo, B.1
Wang, Y.2
Wang, X.F.3
Gao, Y.4
Huang, B.H.5
-
44
-
-
0036135791
-
Quantitative analysis of mycobacterial and propionibacterial DNA in lymph nodes of Japanese and European patients with sarcoidosis
-
DOI 10.1128/JCM.40.1.198-204.2002
-
Eishi Y, Suga M, Ishige I, Kobayashi D, Yamada T, et al. (2002) Quantitative Analysis of Mycobacterial and Propionibacterial DNA in Lymph Nodes of Japanese and European Patients with Sarcoidosis. J Clin Microbiol 40 (1): 198-204. (Pubitemid 34027624)
-
(2002)
Journal of Clinical Microbiology
, vol.40
, Issue.1
, pp. 198-204
-
-
Eishi, Y.1
Suga, M.2
Ishige, I.3
Kobayashi, D.4
Yamada, T.5
Takemura, T.6
Takizawa, T.7
Koike, M.8
Kudoh, S.9
Costabel, U.10
Guzman, J.11
Rizzato, G.12
Gambacorta, M.13
Du, B.R.14
Nicholson, A.G.15
Sharma, O.P.16
Ando, M.17
-
45
-
-
15744402912
-
The genetic contribution of the natriuretic peptide system to cardiovascular diseases
-
Nakayama T (2005) The genetic contribution of the natriuretic peptide system to cardiovascular diseases. Endocr J 52 (1): 11-21.
-
(2005)
Endocr J
, vol.52
, Issue.1
, pp. 11-21
-
-
Nakayama, T.1
-
46
-
-
0030031766
-
Inhibition of the Abl protein-tyrosine kinase in vitro and in vivo by a 2-phenylaminopyrimidine derivative
-
Buchdunger E, Zimmermann J, Mett H, Meyer T, Müller M, et al. (1996) Inhibition of the Abl protein-tyrosine kinase in vitro and in vivo by a 2-phenylaminopyrimidine derivative. Cancer Res 56:100-104.
-
(1996)
Cancer Res
, vol.56
, pp. 100-104
-
-
Buchdunger, E.1
Zimmermann, J.2
Mett, H.3
Meyer, T.4
Müller, M.5
-
47
-
-
0034665713
-
Structural Mechanism for STI-571 Inhibition of Abelson Tyrosine Kinase
-
Schindler T, Bornmann W, Pellicena P, Miller WT, Clarkson B, et al. (2000) Structural Mechanism for STI-571 Inhibition of Abelson Tyrosine Kinase. Science 289: 1938-1942.
-
(2000)
Science
, vol.289
, pp. 1938-1942
-
-
Schindler, T.1
Bornmann, W.2
Pellicena, P.3
Miller, W.T.4
Clarkson, B.5
-
48
-
-
84860328186
-
Prion diseases - Current theories and potential therapies: A brief review
-
Marandi Y, Farahi N, Sadeghi A, Sadeghi-Hashjin G (2012) Prion diseases - current theories and potential therapies: a brief review. Folia Neuropathol 50(1): 46-49.
-
(2012)
Folia Neuropathol
, vol.50
, Issue.1
, pp. 46-49
-
-
Marandi, Y.1
Farahi, N.2
Sadeghi, A.3
Sadeghi-Hashjin, G.4
-
50
-
-
0035119377
-
Apoptosis in relation to neuronal loss in experimental Creutzfeldt-Jakob disease in mice
-
Jesionek-Kupnicka D, Kordek R, Buczyñski J, Liberski PP (2001) Apoptosis in relation to neuronal loss in experimental Creutzfeldt-Jakob disease in mice. Acta Neurobiol Exp 61: 13-19. (Pubitemid 32187883)
-
(2001)
Acta Neurobiologiae Experimentalis
, vol.61
, Issue.1
, pp. 13-19
-
-
Jesionek-Kupnicka, D.1
Kordek, R.2
Buczynski, J.3
Liberski, P.P.4
-
51
-
-
50849116386
-
STI571 prevents apoptosis, tau phosphorylation and behavioural impairments induced by Alzheimer's β-amyloid deposits
-
Cancino GI, Toledo EM, Leal NR, Hernandez DE, Yévenes LF, et al. (2008) STI571 prevents apoptosis, tau phosphorylation and behavioural impairments induced by Alzheimer's β-amyloid deposits. Brain 131:2425-2442.
-
(2008)
Brain
, vol.131
, pp. 2425-2442
-
-
Cancino, G.I.1
Toledo, E.M.2
Leal, N.R.3
Hernandez, D.E.4
Yévenes, L.F.5
-
52
-
-
4744361580
-
Sc in prion-infected cells
-
DOI 10.1074/jbc.M405652200
-
Ertmer A, Gilch S, Yun SW, Flechsig E, Klebl B, et al. (2004) The Tyrosine Kinase Inhibitor STI571 Induces Cellular Clearance of PrPSc in Prion-infected Cells. J Biol Chem 279(40):41918-41927. (Pubitemid 39313641)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.40
, pp. 41918-41927
-
-
Ertmer, A.1
Gilch, S.2
Yun, S.-W.3
Flechsig, E.4
Klebl, B.5
Stein-Gerlach, M.6
Klein, M.A.7
Schatzl, H.M.8
-
53
-
-
77957035964
-
Inhaled Vasoactive Intestinal Peptide Exerts Immunoregulatory Effects in Sarcoidosis
-
Prasse A, Zissel G, Lützen N, Schupp J, Schmiedlin R, et al. (2010) Inhaled Vasoactive Intestinal Peptide Exerts Immunoregulatory Effects in Sarcoidosis. Am J Respir Critic Care Med 182: 540-548.
-
(2010)
Am J Respir Critic Care Med
, vol.182
, pp. 540-548
-
-
Prasse, A.1
Zissel, G.2
Lützen, N.3
Schupp, J.4
Schmiedlin, R.5
-
54
-
-
38049156106
-
Mining concept associations for knowledge discovery through concept chain queries
-
Zhou ZH, Li H, Yang Q editors. Berlin: Springer Berlin Heidelberg
-
Jin W, Srihari RK, Wu X (2007) Mining concept associations for knowledge discovery through concept chain queries. In: Zhou ZH, Li H, Yang Q editors. Advances in Knowledge Discovery and Data Mining. Berlin: Springer Berlin Heidelberg. pp. 555-562.
-
(2007)
Advances in Knowledge Discovery and Data Mining
, pp. 555-562
-
-
Jin, W.1
Srihari, R.K.2
Wu, X.3
-
55
-
-
77952808324
-
Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network
-
Li Y, Jagdish CP (2010) Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network. Bioinformatics 26(9): 1219-1224.
-
(2010)
Bioinformatics
, vol.26
, Issue.9
, pp. 1219-1224
-
-
Li, Y.1
Jagdish, C.P.2
-
56
-
-
84862215494
-
Drug-target interaction prediction by random walk on the heterogeneous network
-
Chen X, Ming-Xi L, Gui-Ying Y (2012) Drug-target interaction prediction by random walk on the heterogeneous network. Mol BioSyst 8(7): 1970-1978.
-
(2012)
Mol BioSyst
, vol.8
, Issue.7
, pp. 1970-1978
-
-
Chen, X.1
Ming-Xi, L.2
Gui-Ying, Y.3
-
57
-
-
84874754277
-
Exploring the Morphospace of Communication Efficiency in Complex Networks
-
Goñi J, Avena-Koenigsberger A, Velez de Mendizabal N, van den Heuvel MP, Betzel RF, et al. (2013) Exploring the Morphospace of Communication Efficiency in Complex Networks. PLoS One 8(3):e58070.
-
(2013)
PLoS One
, vol.8
, Issue.3
-
-
Goñi, J.1
Avena-Koenigsberger, A.2
Velez De Mendizabal, N.3
Van Den Heuvel, M.P.4
Betzel, R.F.5
|