Widespread predatory abilities in the genus Streptomyces

Archives of Microbiology

Volumn 196, Issue 4, 2014, Pages 235-248

  Kumbhar, Charushila ^a,b,c   Mudliar, Praneitha ^b   Bhatia, Latika ^c   Kshirsagar, Aseem ^c   Watve, Milind ^a,c  

^a Anujeeva Biosciences Pvt Ltd   (India)

^b ABASAHEB GARWARE COLLEGE   (India)

^c INDIAN INSTITUTE OF SCIENCE EDUCATION AND RESEARCH   (India)

Author keywords

Antibiotic production; Predation; Secondary metabolite; Streptomyces

Indexed keywords

ANTIBIOTIC AGENT;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIOLYSIS; BACTERIUM CULTURE; BACTERIUM ISOLATE; DRUG SYNTHESIS; METABOLITE; MICROPHOTOGRAPHY; NONHUMAN; PREDATION; PREDATOR; PRIORITY JOURNAL; SECONDARY METABOLITE; STREPTOMYCES;

BACTERIA (MICROORGANISMS); MYXOCOCCALES; PROKARYOTA; STREPTOMYCES;

ANTI-BACTERIAL AGENTS; BACTERIA; FOOD CHAIN; GENE EXPRESSION REGULATION, BACTERIAL; INDIA; SOIL MICROBIOLOGY; STREPTOMYCES;

EID: 84897070193     PISSN: 03028933     EISSN: 1432072X     Source Type: Journal    
DOI: 10.1007/s00203-014-0961-7     Document Type: Article

References (62)

1. Abramoff M, Magelhaes P, Ram S (2004) Image processing with image. J Biophoto Int 11:36-42
2. Adamidis T, Riggle P, Champness W (1990) Mutations in a new Streptomyces coelicolor locus which globally block antibiotic biosynthesis but not sporulation. J Bacteriol 172:2962-2969 (Pubitemid 20179743)
3. Adegboye M, Babalola O (2012) Taxonomy and ecology of antibiotic producing actinomycetes. Afr J Agri Res 7:2255-2261
4. Baba T, Schneewind O (1998) Instruments of microbial warfare: bacteriocin synthesis, toxicity and immunity. Trends Microbiol 6:66-71 (Pubitemid 28080754)
5. Baltz R (2007) Antimicrobials from actinomycetes: back to the future. Microbe Mag 2:125-131
6. Banerjee A, Lin T, Hannapel D (2009) Ultratranslated regions of a mobile transcript mediate RNA metabolism. Plant Physiol 151:1831-1843
7. Bentley S, Chater K, Cerdeno-Tarraga A, Challis G, Thomson N et al (2002) Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417:141-147 (Pubitemid 34506788)
8. Berleman J, Scott J, Chumley T, Kirby J (2008) Predataxis behavior in Myxococcus xanthus. Proc Natl Acad Sci USA 105:17127-17132
9. Casida L (1980) Bacterial predators of Micrococcus luteus in soil. Appl Environ Microbiol 39:1035-1041
10. Casida L (1982) Ensifer adhaerens Gen. Nov., Sp. Nov.: a bacterial predator of bacteria in soil†. Int J Syst Bacteriol 32:339-345
11. Casida L (1983) Interaction of Agromyces ramosus with other bacteria in soil. Appl Environ Microbiol 46:881-888
12. Casida L (1988) Minireview: nonobligate bacterial predation of bacteria in soil. Microbial Ecol 15:1-8
13. Challis G, Hopwood D (2003) Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species. Proc Natl Acad Sci USA 100(Suppl 2):14555-14561 (Pubitemid 37499281)
14. Chater K, Biro S, Lee K, Palmer T, Schrempd H (2010) The complex extracellular biology of Streptomyces. FEMS Microbiol Rev 34:171-198
15. Currie C (2001) A community of ants, fungi, and bacteria: a multi-lateral approach to studying symbiosis. Annu Rev Microbiol 55:357-380
16. Currie C, Bot A, Boomsma J (2003a) Experimental evidence of a tripartite mutualism: bacteria protect ant fungus gardens from specialized parasites. Oikos 101:91-102 (Pubitemid 36614722)
17. Currie C, Scott J, Summerbell R, Malloch D (2003b) Corrigendum: fungus-growing ants use antibiotic-producing bacteria to control garden parasites. Nature 423:461 (Pubitemid 36627000)
18. Currie C, Poulsen M, Mendenhall J, Boomsma J, Billen J (2006) Coevolved crypts and exocrine glands support mutualistic bacteria in fungus-growing ants. Science 311:81-83 (Pubitemid 43063062)
19. Dworkin M, Rosenberg E, Schleifer K (2006) The prokaryotes: ecophysiology and biochemistry, vol 2, 3rd edn. Springer Press, Singapore
20. Fredrickson A, Stephanopoulos G (1981) Microbial competition. Science 213:972-979
21. Germida J, Casida L (1983) Ensifer adhaerens predatory activity against other bacteria in soil, as monitored by indirect phage analysis. Appl Environ Microbiol 45:1380-1388 (Pubitemid 13132972)
22. Goodfellow M, Williams S (1983) Ecology of actinomycetes. Annu Rev Microbiol 37:189-216
23. Gottlieb D (1976) The production and role of antibiotics in soil. J Antibiot 29:987-1000
24. Hartmann T (2007) From waste products to ecochemicals: fifty years research of plant secondary metabolism. Phytochemistry 68:2831-2846
25. Haslam E (1986) Secondary metabolism - fact and fiction. Nat Prod Rep 3:217-249
26. Hillesland K, Velicer G, Lenski R (2009) Experimental evolution of a microbial predator's ability to find prey. Proc Biol Sci 276:459-467
27. Jayapal K, Lian W, Glod F, Sherman D, Hu W (2007) Comparative genomic hybridizations reveal absence of large Streptomyces coelicolor genomic islands in Streptomyces lividans. BMC Genomics 8:229
28. Jenke-Kodama H, Müller R, Dittmann E (2008) Evolutionary mechanisms underlying secondary metabolite diversity. Prog Drug Res 65(119):121-140
29. Kaltenpoth M, Göttler W, Herzner G, Strohm E (2005) Symbiotic bacteria protect wasp larvae from fungal infestation. Curr Biol 15:475-479 (Pubitemid 40323536)
30. Katz E, Demain A (1977) The peptide antibiotics of Bacillus: chemistry, biogenesis, and possible functions. Bacteriol Rev 41:449-474 (Pubitemid 8146394)
31. Kolter R, Moreno F (1992) Genetics of ribosomally synthesized peptide antibiotics. Annu Rev Microbiol 46:141-161
32. Kroiss J, Kaltenpoth M, Schneider B, Schwinger M, Hertweck C et al (2010) Symbiotic streptomycetes provide antibiotic combination prophylaxis for wasp offspring. Nat Chem Biol 6:261-263
33. Kumbhar C, Watve M (2013) Why antibiotics: a comparative evaluation of different hypotheses for the natural role of antibiotics and an evolutionary synthesis. Nat Sci 5:26-40
34. Linares J, Gustafsson I, Baquero F, Martinez J (2006) Antibiotics as intermicrobial signaling agents instead of weapons. Proc Natl Acad Sci USA 103:19484-19489 (Pubitemid 46026057)
35. Luckner M (1972) Secondary metabolism in plants and animals, 2nd edn. Springer, Berlin
36. Malik V (1980) Microbial secondary metabolism. Trends Biochem Sci 5:68-72
37. Martin J, Demain A (1980) Control of antibiotic biosynthesis. Microbiol Rev 44:230-251 (Pubitemid 11128309)
38. Mothes K (1955) Physiology of alkaloids. Annu Rev Plant Physiol 6:393-432
39. Nett M, Ikeda H, Moore B (2009) Genomic basis for natural product biosynthetic diversity in the actinomycetes. Nat Prod Rep 26:1362-1384
40. Nützmanna H, Reyes-Dominguez Y, Scherlach K, Schroeckh V, Horn F et al (2011) Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation. Proc Natl Acad Sci USA 108:14282-14287
41. Pérez J, Muñoz-Dorado J, Braña A, Shimkets L, Sevillano L, Santamaría R (2011) Myxococcus xanthus induces actinorhodin overproduction and aerial mycelium formation by Streptomyces coelicolor. Microbial Biotechnol 4:175-183
42. Robinson T (1974) Metabolism and function of alkaloids in plants. Science 184:430-435
43. Rosamond J, Allsop A (2000) Harnessing the power of the genome in the search for new antibiotics. Science 287:1973-1976 (Pubitemid 30158665)
44. Schroeckh V, Scherlach K, Nützmanna H, Shelest E, Schmidt-Heck W et al (2009) Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans. Proc Natl Acad Sci 106:14558-14563
45. Seigler D (1998) Plant secondary metabolism. Kluwer Academic publisher, Massachusetts, p 759
46. Straight P, Willey J, Kolter R (2006) Interactions between Streptomyces coelicolor and Bacillus subtilis: role of surfactants in raising aerial structures. J Bacteriol 188:4918-4925 (Pubitemid 43956089)
47. Swain T (1977) Secondary compounds as protective agents. Annu Rev Plant Physiol 28:479-501
48. Turner W (1971) Fungal metabolites. Academic press, London, p 446
49. Udwary D, Zeigler L, Asolkar R, Singan V, Lapidus A et al (2007) Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica. Proc Natl Acad Sci USA 104:10376-10381 (Pubitemid 47185673)
50. Ueda K, Kawai S, Ogawa H, Kiyama A, Kubota T (2000) Wide distribution of interspecific stimulatory events on antibiotic production and sporulation among Streptomyces species. J Antibiot 53:979-982
51. Vining L (1990) Functions of secondary metabolites. Annu Rev Microbiol 44:395-427
52. Waksman S, Woodruff H (1941) Actinomyces antibioticus, a new soil organism antagonistic to pathogenic and non-pathogenic bacteria. J Bacteriol 42:231-249
53. Watve M, Kumbhar C (2007) Streptomyces sp. as predators of bacteria. Nat Preced. doi:10.1038/npre.2007.1263.2
54. Watve M, Shejval V, Sonawane C, Rahalkar M, Matapurkar A et al (2000) The "K" selected oligophilic bacteria: a key to uncultured diversity? Curr Sci 78:1535-1542
55. Watve M, Tickoo R, Jog M, Bhole B (2001) How many antibiotics are produced by the genus Streptomyces? Arch Microbiol 176:386-390 (Pubitemid 33020814)
56. Welsch M (1962) Bacteriolytic enzymes from streptomycetes: a review. J Gen Physiol 45:115-124
57. Williams S, Vickers J (1986) The ecology of antibiotic production. Microb Ecol 12:43-52 (Pubitemid 16092728)
58. Williams D, Stone M, Hauck P, Rahman S (1989) Why are secondary metabolites (natural products) biosynthesized? J Nat Prod 52:1189-1208 (Pubitemid 20101766)
59. Wu G, Culley D, Zhang W (2005) Predicted highly expressed genes in the genomes of Streptomyces coelicolor and Streptomyces avermitilis and the implications for their metabolism. Microbiology 151:2175-2187 (Pubitemid 40984291)
60. Xiao Y, Wei X, Ebright R, Wall D (2011) Antibiotic production by myxobacteria plays a role in predation. J Bacteriol 193:4626-4633
61. Yamamoto Y, Kouchiwa T, Hodoki Y, Hotta K, Uchida H, Harada K (1998) Distribution and identification of actinomycetes lysing cyanobacteria in a eutrophic lake. J Appl Phycol 10:391-397 (Pubitemid 29022701)
62. Zeph L, Casida L (1986) Gram-negative versus gram-positive (actinomycete) nonobligate bacterial predators of bacteria in soil. Appl Environ Microbiol 52:819-823 (Pubitemid 16004664)