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Volumn 83, Issue 4, 2014, Pages 303-312

Proposal and evaluation of FASDIM, a Fast And Simple De-Identification Method for unstructured free-text clinical records

Author keywords

Anonymization; Confidentiality; De identification; Free text; Natural language processing

Indexed keywords

ANONYMIZATION; CONFIDENTIALITY; DE-IDENTIFICATION; FREE TEXTS; NATURAL LANGUAGE PROCESSING;

EID: 84896700614     PISSN: 13865056     EISSN: 18728243     Source Type: Journal    
DOI: 10.1016/j.ijmedinf.2013.11.005     Document Type: Article
Times cited : (21)

References (37)
  • 1
    • 0344328867 scopus 로고    scopus 로고
    • (last visited 27.11.13)
    • Summary of the HIPAA Privacy Rule 2013, http://www.hhs.gov/ocr/privacy/hipaa/understanding/summary (last visited 27.11.13).
    • (2013) Summary of the HIPAA Privacy Rule
  • 2
    • 33745562886 scopus 로고    scopus 로고
    • Assessing the difficulty and time cost of de-identification in clinical narratives
    • Dorr D.A., Phillips W.F., Phansalkar S., Sims S.A., Hurdle J.F. Assessing the difficulty and time cost of de-identification in clinical narratives. Methods Inf. Med. 2006, 45(3):246-252.
    • (2006) Methods Inf. Med. , vol.45 , Issue.3 , pp. 246-252
    • Dorr, D.A.1    Phillips, W.F.2    Phansalkar, S.3    Sims, S.A.4    Hurdle, J.F.5
  • 3
    • 77955080124 scopus 로고    scopus 로고
    • Automatic de-identification of textual documents in the electronic health record: a review of recent research
    • Meystre S.M., Friedlin F.J., South B.R., Shen S., Samore M.H. Automatic de-identification of textual documents in the electronic health record: a review of recent research. BMC Med. Res. Methodol. 2010, 10:70.
    • (2010) BMC Med. Res. Methodol. , vol.10 , pp. 70
    • Meystre, S.M.1    Friedlin, F.J.2    South, B.R.3    Shen, S.4    Samore, M.H.5
  • 4
    • 33748740816 scopus 로고    scopus 로고
    • Development and evaluation of an open source software tool for deidentification of pathology reports
    • Beckwith B.A., Mahaadevan R., Balis U.J., Kuo F. Development and evaluation of an open source software tool for deidentification of pathology reports. BMC Med. Inform. Decis. Mak. 2006, 6:12.
    • (2006) BMC Med. Inform. Decis. Mak. , vol.6 , pp. 12
    • Beckwith, B.A.1    Mahaadevan, R.2    Balis, U.J.3    Kuo, F.4
  • 5
    • 0038580808 scopus 로고    scopus 로고
    • Concept-match medical data scrubbing. How pathology text can be used in research
    • Berman J.J. Concept-match medical data scrubbing. How pathology text can be used in research. Arch. Pathol. Lab. Med. 2003, 127(6):680-686.
    • (2003) Arch. Pathol. Lab. Med. , vol.127 , Issue.6 , pp. 680-686
    • Berman, J.J.1
  • 7
    • 49849102836 scopus 로고    scopus 로고
    • A software tool for removing patient identifying information from clinical documents
    • Friedlin F.J., McDonald C.J. A software tool for removing patient identifying information from clinical documents. J. Am. Med. Inform. Assoc. 2008, 15(5):601-610.
    • (2008) J. Am. Med. Inform. Assoc. , vol.15 , Issue.5 , pp. 601-610
    • Friedlin, F.J.1    McDonald, C.J.2
  • 8
    • 0942266011 scopus 로고    scopus 로고
    • Evaluation of a deidentification (De-Id) software engine to share pathology reports and clinical documents for research
    • Gupta D., Saul M., Gilbertson J. Evaluation of a deidentification (De-Id) software engine to share pathology reports and clinical documents for research. Am. J. Clin. Pathol. 2004, 121(2):176-186.
    • (2004) Am. J. Clin. Pathol. , vol.121 , Issue.2 , pp. 176-186
    • Gupta, D.1    Saul, M.2    Gilbertson, J.3
  • 10
    • 57149148103 scopus 로고    scopus 로고
    • Repurposing the clinical record: can an existing natural language processing system de-identify clinical notes?
    • Morrison F.P., et al. Repurposing the clinical record: can an existing natural language processing system de-identify clinical notes?. J. Am. Med. Inform. Assoc. 2009, 16(1):37-39.
    • (2009) J. Am. Med. Inform. Assoc. , vol.16 , Issue.1 , pp. 37-39
    • Morrison, F.P.1
  • 13
    • 0030333205 scopus 로고    scopus 로고
    • Replacing personally-identifying information in medical records, the Scrub system
    • Sweeney L. Replacing personally-identifying information in medical records, the Scrub system. Proc. AMIA Annu. Fall Symp. 1996, 333-337.
    • (1996) Proc. AMIA Annu. Fall Symp. , pp. 333-337
    • Sweeney, L.1
  • 14
    • 0036369895 scopus 로고    scopus 로고
    • Identification of patient name references within medical documents using semantic selectional restrictions
    • Taira R., Bui A., Kangarloo H. Identification of patient name references within medical documents using semantic selectional restrictions. Proc. AMIA Symp. 2002, 757-761.
    • (2002) Proc. AMIA Symp. , pp. 757-761
    • Taira, R.1    Bui, A.2    Kangarloo, H.3
  • 15
    • 0036368242 scopus 로고    scopus 로고
    • A successful technique for removing names in pathology reports using an augmented search an replace method
    • Thomas S.M., et al. A successful technique for removing names in pathology reports using an augmented search an replace method. Proc. AMIA Symp. 2002, 777-781.
    • (2002) Proc. AMIA Symp. , pp. 777-781
    • Thomas, S.M.1
  • 16
    • 71549144430 scopus 로고    scopus 로고
    • Developing a standard for de-identifying electronic patient records written in Swedish: precision, recall and F-measure in a manual and computerized annotation trial
    • Velupillai S., Dalianis H., Hassel M., Nilsson G.H. Developing a standard for de-identifying electronic patient records written in Swedish: precision, recall and F-measure in a manual and computerized annotation trial. Int. J. Med. Inform. 2009, 78(December (12)):e19-e26.
    • (2009) Int. J. Med. Inform. , vol.78 DECEMBER , Issue.12
    • Velupillai, S.1    Dalianis, H.2    Hassel, M.3    Nilsson, G.H.4
  • 17
    • 84896726697 scopus 로고    scopus 로고
    • (last visited 27.11.13)
    • UMLS 2013, http://www.nlm.nih.gov/research/umls (last visited 27.11.13).
    • (2013) UMLS
  • 18
    • 78650217579 scopus 로고    scopus 로고
    • The MITRE Identification Scrubber Toolkit: design, training, and assessment
    • Aberdeen J., Bayer S., Yeniterzi R., et al. The MITRE Identification Scrubber Toolkit: design, training, and assessment. Int. J. Med. Inform. 2010, 79(December (12)):849-859.
    • (2010) Int. J. Med. Inform. , vol.79 DECEMBER , Issue.12 , pp. 849-859
    • Aberdeen, J.1    Bayer, S.2    Yeniterzi, R.3
  • 22
    • 34548497406 scopus 로고    scopus 로고
    • State-of-the-art anonymization of medical records using an iterative machine learning framework
    • Szarvas G., Farkas R., Busa-Fekete R. State-of-the-art anonymization of medical records using an iterative machine learning framework. J. Am. Med. Inform. Assoc. 2007, 14(October (5)):574-580.
    • (2007) J. Am. Med. Inform. Assoc. , vol.14 OCTOBER , Issue.5 , pp. 574-580
    • Szarvas, G.1    Farkas, R.2    Busa-Fekete, R.3
  • 23
    • 37649006666 scopus 로고    scopus 로고
    • A de-identifier for medical discharge summaries
    • Uzuner Ö., Sibanda T.C., Luo Y., Szolovits P. A de-identifier for medical discharge summaries. Artif. Intell. Med. 2008, 42(January (1)):13-35.
    • (2008) Artif. Intell. Med. , vol.42 JANUARY , Issue.1 , pp. 13-35
    • Uzuner, Ö.1    Sibanda, T.C.2    Luo, Y.3    Szolovits, P.4
  • 24
    • 34548490954 scopus 로고    scopus 로고
    • Rapidly retargetable approaches to de-identification in medical records
    • Wellner B., Huyck M., Mardis S., et al. Rapidly retargetable approaches to de-identification in medical records. J. Am. Med. Inform. Assoc. 2007, 14(5):564-573.
    • (2007) J. Am. Med. Inform. Assoc. , vol.14 , Issue.5 , pp. 564-573
    • Wellner, B.1    Huyck, M.2    Mardis, S.3
  • 26
    • 84866420050 scopus 로고    scopus 로고
    • Evaluating current automatic de-identification methods with Veteran's health administration clinical documents
    • Ferrández O., South B.R., Shen S., Friedlin F.J., Samore M.H., Meystre S.M. Evaluating current automatic de-identification methods with Veteran's health administration clinical documents. BMC Med. Res. Methodol. 2012, 12(July):109.
    • (2012) BMC Med. Res. Methodol. , vol.12 JULY , pp. 109
    • Ferrández, O.1    South, B.R.2    Shen, S.3    Friedlin, F.J.4    Samore, M.H.5    Meystre, S.M.6
  • 27
    • 84896723820 scopus 로고    scopus 로고
    • (last visited 27.11.13)
    • The FASDIM Web Page 2013, http://www.fasdim.org (last visited 27.11.13).
    • (2013) The FASDIM Web Page
  • 28
    • 77953640249 scopus 로고    scopus 로고
    • De-identification of primary care electronic medical records free-text data in Ontario, Canada
    • Tu K., Klein-Geltink J., Mitiku T.F., Mihai C., Martin J. De-identification of primary care electronic medical records free-text data in Ontario, Canada. BMC Med. Inform. Decis. Mak. 2010, 10:35.
    • (2010) BMC Med. Inform. Decis. Mak. , vol.10 , pp. 35
    • Tu, K.1    Klein-Geltink, J.2    Mitiku, T.F.3    Mihai, C.4    Martin, J.5
  • 29
    • 34548508913 scopus 로고    scopus 로고
    • Evaluating the state-of-the-art in automatic de-identification
    • Uzuner Ö., Luo Y., Szolovits P. Evaluating the state-of-the-art in automatic de-identification. J. Am. Med. Inform. Assoc. 2007, 14(5):550-563.
    • (2007) J. Am. Med. Inform. Assoc. , vol.14 , Issue.5 , pp. 550-563
    • Uzuner, Ö.1    Luo, Y.2    Szolovits, P.3
  • 34
    • 79851514417 scopus 로고    scopus 로고
    • A methodology for the pseudonymization of medical data
    • Neubauer T., Heurix J. A methodology for the pseudonymization of medical data. Int. J. Med. Inform. 2011, 80(March (3)):190-204.
    • (2011) Int. J. Med. Inform. , vol.80 MARCH , Issue.3 , pp. 190-204
    • Neubauer, T.1    Heurix, J.2
  • 35
    • 34548200762 scopus 로고    scopus 로고
    • Applying language technology to nursing documents: pros and cons with a focus on ethics
    • October
    • Suominen H., Lehtikunnas T., Back B., Karsten H., Salakoski T., Salanterä S. Applying language technology to nursing documents: pros and cons with a focus on ethics. Int. J. Med. Inform. 2007, October (76)(Suppl. 2):S293-S301.
    • (2007) Int. J. Med. Inform. , vol.76 , Issue.2 SUPPL.
    • Suominen, H.1    Lehtikunnas, T.2    Back, B.3    Karsten, H.4    Salakoski, T.5    Salanterä, S.6
  • 36
    • 34548508913 scopus 로고    scopus 로고
    • Evaluating the state-of-the-art in automatic de-identification
    • October (5)(Epub June 28, 2007)
    • Uzuner O., Luo Y., Szolovits P. Evaluating the state-of-the-art in automatic de-identification. J. Am. Med. Inform. Assoc. 2007, 14(September-October (5)):550-563. (Epub June 28, 2007).
    • (2007) J. Am. Med. Inform. Assoc. , vol.14 SEPTEMBER , pp. 550-563
    • Uzuner, O.1    Luo, Y.2    Szolovits, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.