-
1
-
-
17444430392
-
microRNA-directed phasing during trans-acting siRNA biogenesis in plants
-
Allen, E., Xie, Z., Gustafson, A.M. and Carrington, J.C. (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell, 121, 207-221.
-
(2005)
Cell
, vol.121
, pp. 207-221
-
-
Allen, E.1
Xie, Z.2
Gustafson, A.M.3
Carrington, J.C.4
-
2
-
-
77957745176
-
The microRNA159-regulated GAMYB-like genes inhibit growth and promote programmed cell death in Arabidopsis
-
Alonso-Peral, M.M., Li, J., Li, Y., Allen, R.S., Schnippenkoetter, W., Ohms, S., White, R.G. and Millar, A.A. (2010) The microRNA159-regulated GAMYB-like genes inhibit growth and promote programmed cell death in Arabidopsis. Plant Physiol. 154, 757-771.
-
(2010)
Plant Physiol.
, vol.154
, pp. 757-771
-
-
Alonso-Peral, M.M.1
Li, J.2
Li, Y.3
Allen, R.S.4
Schnippenkoetter, W.5
Ohms, S.6
White, R.G.7
Millar, A.A.8
-
3
-
-
36749037521
-
The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
-
Aravin, A.A., Hannon, G.J. and Brennecke, J. (2007) The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race. Science, 318, 761-764.
-
(2007)
Science
, vol.318
, pp. 761-764
-
-
Aravin, A.A.1
Hannon, G.J.2
Brennecke, J.3
-
4
-
-
0347444723
-
MicroRNAs: genomics, biogenesis, mechanism, and function
-
Bartel, D.P. (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell, 116, 281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
5
-
-
36549029334
-
Molecular breeding of switchgrass for use as a biofuel crop
-
Bouton, J.H. (2007) Molecular breeding of switchgrass for use as a biofuel crop. Curr. Opin. Genet. Dev. 17, 553-558.
-
(2007)
Curr. Opin. Genet. Dev.
, vol.17
, pp. 553-558
-
-
Bouton, J.H.1
-
6
-
-
84861014492
-
Effects of aluminum oxide nanoparticles on the growth, development, and microRNA expression of tobacco (Nicotiana tabacum)
-
doi:10.1371/journal.pone.0034783.
-
Burklew, C.E., Ashlock, J., Winfrey, W.B. and Zhang, B.H. (2012) Effects of aluminum oxide nanoparticles on the growth, development, and microRNA expression of tobacco (Nicotiana tabacum). PLoS ONE, 7, e34783. doi:10.1371/journal.pone.0034783.
-
(2012)
PLoS ONE
, vol.7
-
-
Burklew, C.E.1
Ashlock, J.2
Winfrey, W.B.3
Zhang, B.H.4
-
7
-
-
0038299558
-
Role of microRNAs in plant and animal development
-
Carrington, J.C. and Ambros, V. (2003) Role of microRNAs in plant and animal development. Science, 301, 336-338.
-
(2003)
Science
, vol.301
, pp. 336-338
-
-
Carrington, J.C.1
Ambros, V.2
-
8
-
-
70350227275
-
Small RNAs and their roles in plant development
-
Chen, X. (2009) Small RNAs and their roles in plant development. Annu. Rev. Cell Dev. Biol. 25, 21-44.
-
(2009)
Annu. Rev. Cell Dev. Biol.
, vol.25
, pp. 21-44
-
-
Chen, X.1
-
9
-
-
29144470346
-
Real-time quantification of microRNAs by stem-loop RT-PCR
-
doi:10.1093/nar/gni178.
-
Chen, C.F., Ridzon, D.A., Broomer, A.J., Zhou, Z.H., Lee, D.H., Nguyen, J.T., Barbisin, M., Xu, N.L., Mahuvakar, V.R., Andersen, M.R., Lao, K.Q., Livak, K.J. and Guegler, K.J. (2005) Real-time quantification of microRNAs by stem-loop RT-PCR. Nucleic Acids Res. 33, e179. doi:10.1093/nar/gni178.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Chen, C.F.1
Ridzon, D.A.2
Broomer, A.J.3
Zhou, Z.H.4
Lee, D.H.5
Nguyen, J.T.6
Barbisin, M.7
Xu, N.L.8
Mahuvakar, V.R.9
Andersen, M.R.10
Lao, K.Q.11
Livak, K.J.12
Guegler, K.J.13
-
10
-
-
80054819864
-
Overexpression of the maize Corngrass1 microRNA prevents flowering, improves digestibility, and increases starch content of switchgrass
-
Chuck, G.S., Tobias, C., Sun, L., Kraemer, F., Li, C., Dibble, D., Arora, R., Bragg, J.N., Vogel, J.P., Singh, S., Simmons, B.A., Pauly, M. and Hake, S. (2011) Overexpression of the maize Corngrass1 microRNA prevents flowering, improves digestibility, and increases starch content of switchgrass. Proc. Natl Acad. Sci. USA 108, 17550-17555.
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 17550-17555
-
-
Chuck, G.S.1
Tobias, C.2
Sun, L.3
Kraemer, F.4
Li, C.5
Dibble, D.6
Arora, R.7
Bragg, J.N.8
Vogel, J.P.9
Singh, S.10
Simmons, B.A.11
Pauly, M.12
Hake, S.13
-
11
-
-
84865428507
-
The Phaseolus vulgaris miR159a precursor encodes a second differentially expressed microRNA
-
Contreras-Cubas, C., Rabanal, F.A., Arenas-Huertero, C., Ortiz, M.A., Covarrubias, A.A. and Reyes, J.L. (2011) The Phaseolus vulgaris miR159a precursor encodes a second differentially expressed microRNA. Plant Mol. Biol. 80, 103-115.
-
(2011)
Plant Mol. Biol.
, vol.80
, pp. 103-115
-
-
Contreras-Cubas, C.1
Rabanal, F.A.2
Arenas-Huertero, C.3
Ortiz, M.A.4
Covarrubias, A.A.5
Reyes, J.L.6
-
12
-
-
37249011300
-
SALT TOLERANCE HOMOLOG2, a B-box protein in Arabidopsis that activates transcription and positively regulates light-mediated development
-
Datta, S., Hettiarachchi, C., Johansson, H. and Holm, M. (2007) SALT TOLERANCE HOMOLOG2, a B-box protein in Arabidopsis that activates transcription and positively regulates light-mediated development. Plant Cell, 19, 3242-3255.
-
(2007)
Plant Cell
, vol.19
, pp. 3242-3255
-
-
Datta, S.1
Hettiarachchi, C.2
Johansson, H.3
Holm, M.4
-
13
-
-
0035160923
-
RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs
-
Djikeng, A., Shi, H., Tschudi, C. and Ullu, E. (2001) RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs. RNA, 7, 1522-1530.
-
(2001)
RNA
, vol.7
, pp. 1522-1530
-
-
Djikeng, A.1
Shi, H.2
Tschudi, C.3
Ullu, E.4
-
14
-
-
75249093378
-
MicroRazerS: rapid alignment of small RNA reads
-
Emde, A.K., Grunert, M., Weese, D., Reinert, K. and Sperling, S.R. (2010) MicroRazerS: rapid alignment of small RNA reads. Bioinformatics, 26, 123-124.
-
(2010)
Bioinformatics
, vol.26
, pp. 123-124
-
-
Emde, A.K.1
Grunert, M.2
Weese, D.3
Reinert, K.4
Sperling, S.R.5
-
15
-
-
0037316517
-
Posttranscriptional gene silencing is not compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) mutant, a homolog of Dicer-1 from Drosophila
-
Finnegan, E.J., Margis, R. and Waterhouse, P.M. (2003) Posttranscriptional gene silencing is not compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) mutant, a homolog of Dicer-1 from Drosophila. Curr. Biol. 13, 236-240.
-
(2003)
Curr. Biol.
, vol.13
, pp. 236-240
-
-
Finnegan, E.J.1
Margis, R.2
Waterhouse, P.M.3
-
16
-
-
84855985318
-
Salt and drought stresses induce the aberrant expression of microRNA genes in tobacco
-
Frazier, T.P., Sun, G.L., Burklew, C.E. and Zhang, B.H. (2011) Salt and drought stresses induce the aberrant expression of microRNA genes in tobacco. Mol. Biotechnol. 49, 159-165.
-
(2011)
Mol. Biotechnol.
, vol.49
, pp. 159-165
-
-
Frazier, T.P.1
Sun, G.L.2
Burklew, C.E.3
Zhang, B.H.4
-
17
-
-
84862800354
-
Overexpression of miR156 in switchgrass (Panicum virgatum L.) results in various morphological alterations and leads to improved biomass production
-
Fu, C., Sunkar, R., Zhou, C., Shen, H., Zhang, J.Y., Matts, J., Wolf, J., Mann, D.G., Stewart C.N. Jr, Tang, Y. and Wang, Z.Y. (2012) Overexpression of miR156 in switchgrass (Panicum virgatum L.) results in various morphological alterations and leads to improved biomass production. Plant Biotechnol. J. 10, 443-452.
-
(2012)
Plant Biotechnol. J.
, vol.10
, pp. 443-452
-
-
Fu, C.1
Sunkar, R.2
Zhou, C.3
Shen, H.4
Zhang, J.Y.5
Matts, J.6
Wolf, J.7
Mann, D.G.8
Stewart Jr., C.N.9
Tang, Y.10
Wang, Z.Y.11
-
18
-
-
84860224690
-
The heterologous expression in Arabidopsis of a chrysanthemum Cys2/His2 zinc finger protein gene confers salinity and drought tolerance
-
Gao, H., Song, A., Zhu, X., Chen, F., Jiang, J., Chen, Y., Sun, Y., Shan, H., Gu, C., Li, P. and Chen, S. (2011) The heterologous expression in Arabidopsis of a chrysanthemum Cys2/His2 zinc finger protein gene confers salinity and drought tolerance. Planta, 235, 979-993.
-
(2011)
Planta
, vol.235
, pp. 979-993
-
-
Gao, H.1
Song, A.2
Zhu, X.3
Chen, F.4
Jiang, J.5
Chen, Y.6
Sun, Y.7
Shan, H.8
Gu, C.9
Li, P.10
Chen, S.11
-
19
-
-
78651323093
-
Rfam: Wikipedia, clans and the "decimal" release
-
Gardner, P.P., Daub, J., Tate, J., Moore, B.L., Osuch, I.H., Griffiths-Jones, S., Finn, R.D., Nawrocki, E.P., Kolbe, D.L., Eddy, S.R. and Bateman, A. (2011) Rfam: Wikipedia, clans and the "decimal" release. Nucleic Acids Res. 39 (Database issue), D141-D145.
-
(2011)
Nucleic Acids Res.
, vol.39
, Issue.DATABASE ISSUE
-
-
Gardner, P.P.1
Daub, J.2
Tate, J.3
Moore, B.L.4
Osuch, I.H.5
Griffiths-Jones, S.6
Finn, R.D.7
Nawrocki, E.P.8
Kolbe, D.L.9
Eddy, S.R.10
Bateman, A.11
-
20
-
-
0347755643
-
The microRNA Registry
-
Griffiths-Jones, S. (2004) The microRNA Registry. Nucleic Acids Res. 32 (Database issue), 109-111.
-
(2004)
Nucleic Acids Res.
, vol.32
, Issue.Database issue
, pp. 109-111
-
-
Griffiths-Jones, S.1
-
21
-
-
38549150275
-
miRBase: tools for microRNA genomics
-
Griffiths-Jones, S., Saini, H.K., van Dongen, S. and Enright, A.J. (2008) miRBase: tools for microRNA genomics. Nucleic Acids Res. 36, D154-D158.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Griffiths-Jones, S.1
Saini, H.K.2
van Dongen, S.3
Enright, A.J.4
-
22
-
-
33645525893
-
MicroRNAS and their regulatory roles in plants
-
Jones-Rhoades, M.W., Bartel, D.P. and Bartel, B. (2006) MicroRNAS and their regulatory roles in plants. Annu. Rev. Plant Biol. 57, 19-53.
-
(2006)
Annu. Rev. Plant Biol.
, vol.57
, pp. 19-53
-
-
Jones-Rhoades, M.W.1
Bartel, D.P.2
Bartel, B.3
-
23
-
-
80054681545
-
In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma
-
Karreth, F.A., Tay, Y., Perna, D., Ala, U., Tan, S.M., Rust, A.G., DeNicola, G., Webster, K.A., Weiss, D., Perez-Mancera, P.A., Krauthammer, M., Halaban, R., Provero, P., Adams, D.J., Tuveson, D.A. and Pandolfi, P.P. (2011) In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma. Cell, 147, 382-395.
-
(2011)
Cell
, vol.147
, pp. 382-395
-
-
Karreth, F.A.1
Tay, Y.2
Perna, D.3
Ala, U.4
Tan, S.M.5
Rust, A.G.6
DeNicola, G.7
Webster, K.A.8
Weiss, D.9
Perez-Mancera, P.A.10
Krauthammer, M.11
Halaban, R.12
Provero, P.13
Adams, D.J.14
Tuveson, D.A.15
Pandolfi, P.P.16
-
24
-
-
41149149873
-
Sorting out small RNAs
-
Kim, V.N. (2008) Sorting out small RNAs. Cell, 133, 25-26.
-
(2008)
Cell
, vol.133
, pp. 25-26
-
-
Kim, V.N.1
-
25
-
-
78651293534
-
miRBase: integrating microRNA annotation and deep-sequencing data
-
(Database issue)
-
Kozomara, A. and Griffiths-Jones, S. (2011) miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res. 39 (Database issue), 152-157.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 152-157
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
26
-
-
79954606171
-
Identification and analysis of seven HO-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)
-
Li, T., Li, H., Zhang, Y.X. and Liu, J.Y. (2011) Identification and analysis of seven HO-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica). Nucleic Acids Res. 39, 2821-2833.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 2821-2833
-
-
Li, T.1
Li, H.2
Zhang, Y.X.3
Liu, J.Y.4
-
27
-
-
77953516310
-
MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thaliana
-
Liang, G., Yang, F. and Yu, D. (2010) MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thaliana. Plant J. 62, 1046-1057.
-
(2010)
Plant J.
, vol.62
, pp. 1046-1057
-
-
Liang, G.1
Yang, F.2
Yu, D.3
-
28
-
-
33845312687
-
MicroRNA responses to cellular stress
-
Marsit, C.J., Eddy, K. and Kelsey, K.T. (2006) MicroRNA responses to cellular stress. Cancer Res. 66, 10843-10848.
-
(2006)
Cancer Res.
, vol.66
, pp. 10843-10848
-
-
Marsit, C.J.1
Eddy, K.2
Kelsey, K.T.3
-
29
-
-
79551663294
-
miR-29 and miR-30 regulate B-Myb expression during cellular senescence
-
Martinez, I., Cazalla, D., Almstead, L.L., Steitz, J.A. and DiMaio, D. (2011) miR-29 and miR-30 regulate B-Myb expression during cellular senescence. Proc. Natl Acad. Sci. USA 108, 522-527.
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 522-527
-
-
Martinez, I.1
Cazalla, D.2
Almstead, L.L.3
Steitz, J.A.4
DiMaio, D.5
-
30
-
-
77953129094
-
Identification of microRNAs and their targets in switchgrass, a model biofuel plant species
-
Matts, J., Jagadeeswaran, G., Roe, B.A. and Sunkar, R. (2010) Identification of microRNAs and their targets in switchgrass, a model biofuel plant species. J. Plant Physiol. 167, 896-904.
-
(2010)
J. Plant Physiol.
, vol.167
, pp. 896-904
-
-
Matts, J.1
Jagadeeswaran, G.2
Roe, B.A.3
Sunkar, R.4
-
31
-
-
4444383501
-
Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement
-
Mochizuki, K. and Gorovsky, M.A. (2004) Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement. Genes Dev. 18, 2068-2073.
-
(2004)
Genes Dev.
, vol.18
, pp. 2068-2073
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
32
-
-
79960275349
-
Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns
-
Mohorianu, I., Schwach, F., Jing, R., Lopez-Gomollon, S., Moxon, S., Szittya, G., Sorefan, K., Moulton, V. and Dalmay, T. (2011) Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns. Plant J. 67, 232-246.
-
(2011)
Plant J.
, vol.67
, pp. 232-246
-
-
Mohorianu, I.1
Schwach, F.2
Jing, R.3
Lopez-Gomollon, S.4
Moxon, S.5
Szittya, G.6
Sorefan, K.7
Moulton, V.8
Dalmay, T.9
-
33
-
-
33646157967
-
Comprehensive analysis of microRNA expression patterns in hepatocellular carcinoma and non-tumorous tissues
-
Murakami, Y., Yasuda, T., Saigo, K., Urashima, T., Toyoda, H., Okanoue, T. and Shimotohno, K. (2006) Comprehensive analysis of microRNA expression patterns in hepatocellular carcinoma and non-tumorous tissues. Oncogene, 25, 2537-2545.
-
(2006)
Oncogene
, vol.25
, pp. 2537-2545
-
-
Murakami, Y.1
Yasuda, T.2
Saigo, K.3
Urashima, T.4
Toyoda, H.5
Okanoue, T.6
Shimotohno, K.7
-
34
-
-
77957243921
-
Long noncoding RNAs with enhancer-like function in human cells
-
Orom, U.A., Derrien, T., Beringer, M., Gumireddy, K., Gardini, A., Bussotti, G., Lai, F., Zytnicki, M., Notredame, C., Huang, Q., Guigo, R. and Shiekhattar, R. (2010) Long noncoding RNAs with enhancer-like function in human cells. Cell, 143, 46-58.
-
(2010)
Cell
, vol.143
, pp. 46-58
-
-
Orom, U.A.1
Derrien, T.2
Beringer, M.3
Gumireddy, K.4
Gardini, A.5
Bussotti, G.6
Lai, F.7
Zytnicki, M.8
Notredame, C.9
Huang, Q.10
Guigo, R.11
Shiekhattar, R.12
-
35
-
-
34250729886
-
Origin and evolution of human microRNAs from transposable elements
-
Piriyapongsa, J., Marino-Ramirez, L. and Jordan, I.K. (2007) Origin and evolution of human microRNAs from transposable elements. Genetics, 176, 1323-1337.
-
(2007)
Genetics
, vol.176
, pp. 1323-1337
-
-
Piriyapongsa, J.1
Marino-Ramirez, L.2
Jordan, I.K.3
-
36
-
-
33845688601
-
A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana
-
Rajagopalan, R., Vaucheret, H., Trejo, J. and Bartel, D.P. (2006) A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. Genes Dev. 20, 3407-3425.
-
(2006)
Genes Dev.
, vol.20
, pp. 3407-3425
-
-
Rajagopalan, R.1
Vaucheret, H.2
Trejo, J.3
Bartel, D.P.4
-
37
-
-
0037072660
-
Small RNAs correspond to centromere heterochromatic repeats
-
Reinhart, B.J. and Bartel, D.P. (2002) Small RNAs correspond to centromere heterochromatic repeats. Science, 297, 1831.
-
(2002)
Science
, vol.297
, pp. 1831
-
-
Reinhart, B.J.1
Bartel, D.P.2
-
38
-
-
0037162702
-
Prediction of plant microRNA targets
-
Rhoades, M.W., Reinhart, B.J., Lim, L.P., Burge, C.B., Bartel, B. and Bartel, D.P. (2002) Prediction of plant microRNA targets. Cell, 110, 513-520.
-
(2002)
Cell
, vol.110
, pp. 513-520
-
-
Rhoades, M.W.1
Reinhart, B.J.2
Lim, L.P.3
Burge, C.B.4
Bartel, B.5
Bartel, D.P.6
-
39
-
-
82955233179
-
Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks
-
Shen, H., He, X., Poovaiah, C.R., Wuddineh, W.A., Ma, J., Mann, D.G., Wang, H., Jackson, L., Tang, Y., Stewart, C.N. Jr, Chen, F. and Dixon, R.A. (2012) Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks. New Phytol. 193, 121-136.
-
(2012)
New Phytol.
, vol.193
, pp. 121-136
-
-
Shen, H.1
He, X.2
Poovaiah, C.R.3
Wuddineh, W.A.4
Ma, J.5
Mann, D.G.6
Wang, H.7
Jackson, L.8
Tang, Y.9
Stewart Jr., C.N.10
Chen, F.11
Dixon, R.A.12
-
40
-
-
66449136667
-
ABySS: a parallel assembler for short read sequence data
-
Simpson, J.T., Wong, K., Jackman, S.D., Schein, J.E., Jones, S.J. and Birol, I. (2009) ABySS: a parallel assembler for short read sequence data. Genome Res. 19, 1117-1123.
-
(2009)
Genome Res.
, vol.19
, pp. 1117-1123
-
-
Simpson, J.T.1
Wong, K.2
Jackman, S.D.3
Schein, J.E.4
Jones, S.J.5
Birol, I.6
-
41
-
-
84859073075
-
MicroRNA expression analysis in the cellulosic biofuel crop switchgrass (Panicum virgatum) under abiotic stress
-
Sun, G., Stewart, C.N. Jr, Xiao, P. and Zhang, B. (2012) MicroRNA expression analysis in the cellulosic biofuel crop switchgrass (Panicum virgatum) under abiotic stress. PLoS ONE, 7, e32017.
-
(2012)
PLoS ONE
, vol.7
-
-
Sun, G.1
Stewart Jr., C.N.2
Xiao, P.3
Zhang, B.4
-
42
-
-
33747505089
-
Posttranscriptional induction of two Cu/Zn superoxide dismutase genes in Arabidopsis is mediated by downregulation of miR398 and important for oxidative stress tolerance
-
Sunkar, R., Kapoor, A. and Zhu, J.K. (2006) Posttranscriptional induction of two Cu/Zn superoxide dismutase genes in Arabidopsis is mediated by downregulation of miR398 and important for oxidative stress tolerance. Plant Cell, 18, 2051-2065.
-
(2006)
Plant Cell
, vol.18
, pp. 2051-2065
-
-
Sunkar, R.1
Kapoor, A.2
Zhu, J.K.3
-
43
-
-
2342450524
-
Molecular evolution of a microRNA cluster
-
Tanzer, A. and Stadler, P.F. (2004) Molecular evolution of a microRNA cluster. J. Mol. Biol. 339, 327-335.
-
(2004)
J. Mol. Biol.
, vol.339
, pp. 327-335
-
-
Tanzer, A.1
Stadler, P.F.2
-
44
-
-
79959262495
-
Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
-
Wei, L.Q., Yan, L.F. and Wang, T. (2011) Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa. Genome Biol. 12, R53.
-
(2011)
Genome Biol.
, vol.12
-
-
Wei, L.Q.1
Yan, L.F.2
Wang, T.3
-
45
-
-
34547941361
-
MiR-150 controls B cell differentiation by targeting the transcription factor c-Myb
-
Xiao, C., Calado, D.P., Galler, G., Thai, T.H., Patterson, H.C., Wang, J., Rajewsky, N., Bender, T.P. and Rajewsky, K. (2007) MiR-150 controls B cell differentiation by targeting the transcription factor c-Myb. Cell, 131, 146-159.
-
(2007)
Cell
, vol.131
, pp. 146-159
-
-
Xiao, C.1
Calado, D.P.2
Galler, G.3
Thai, T.H.4
Patterson, H.C.5
Wang, J.6
Rajewsky, N.7
Bender, T.P.8
Rajewsky, K.9
-
46
-
-
0038076109
-
Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation
-
Xie, Z., Kasschau, K.D. and Carrington, J.C. (2003) Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation. Curr. Biol. 13, 784-789.
-
(2003)
Curr. Biol.
, vol.13
, pp. 784-789
-
-
Xie, Z.1
Kasschau, K.D.2
Carrington, J.C.3
-
47
-
-
19344374219
-
Genetic and functional diversification of small RNA pathways in plants
-
Xie, Z., Johansen, L.K., Gustafson, A.M., Kasschau, K.D., Lellis, A.D., Zilberman, D., Jacobsen, S.E. and Carrington, J.C. (2004) Genetic and functional diversification of small RNA pathways in plants. PLoS Biol. 2, E104.
-
(2004)
PLoS Biol.
, vol.2
-
-
Xie, Z.1
Johansen, L.K.2
Gustafson, A.M.3
Kasschau, K.D.4
Lellis, A.D.5
Zilberman, D.6
Jacobsen, S.E.7
Carrington, J.C.8
-
48
-
-
77953683331
-
Identification and characterization of microRNAs and their targets in the bioenergy plant switchgrass (Panicum virgatum)
-
Xie, F., Frazier, T.P. and Zhang, B. (2010) Identification and characterization of microRNAs and their targets in the bioenergy plant switchgrass (Panicum virgatum). Planta, 232, 417-434.
-
(2010)
Planta
, vol.232
, pp. 417-434
-
-
Xie, F.1
Frazier, T.P.2
Zhang, B.3
-
49
-
-
84865407608
-
miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs
-
Xie, F., Xiao, P., Chen, D., Xu, L. and Zhang, B. (2012) miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs. Plant Mol. Biol. 80, 75-84.
-
(2012)
Plant Mol. Biol.
, vol.80
, pp. 75-84
-
-
Xie, F.1
Xiao, P.2
Chen, D.3
Xu, L.4
Zhang, B.5
-
50
-
-
84856540295
-
Tracing the origin and evolutionary history of plant nucleotide-binding site-leucine-rich repeat (NBS-LRR) genes
-
Yue, J.X., Meyers, B.C., Chen, J.Q., Tian, D. and Yang, S. (2012) Tracing the origin and evolutionary history of plant nucleotide-binding site-leucine-rich repeat (NBS-LRR) genes. New Phytol. 193, 1049-1063.
-
(2012)
New Phytol.
, vol.193
, pp. 1049-1063
-
-
Yue, J.X.1
Meyers, B.C.2
Chen, J.Q.3
Tian, D.4
Yang, S.5
-
51
-
-
70349325795
-
Expression of MicroRNAs in Cotton
-
Zhang, B.H. and Pan, X.P. (2009) Expression of MicroRNAs in Cotton. Mol. Biotechnol. 42, 269-274.
-
(2009)
Mol. Biotechnol.
, vol.42
, pp. 269-274
-
-
Zhang, B.H.1
Pan, X.P.2
-
52
-
-
81555234540
-
iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences
-
Zheng, Y., Zhao, L., Gao, J. and Fei, Z. (2011) iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences. BMC Bioinformatics, 12, 453.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 453
-
-
Zheng, Y.1
Zhao, L.2
Gao, J.3
Fei, Z.4
-
53
-
-
0036999615
-
Salt and drought stress signal transduction in plants
-
Zhu, J.K. (2002) Salt and drought stress signal transduction in plants. Annu. Rev. Plant Biol. 53, 247-273.
-
(2002)
Annu. Rev. Plant Biol.
, vol.53
, pp. 247-273
-
-
Zhu, J.K.1
|