-
1
-
-
0025255418
-
How embryos work: A comparative view of diverse modes of cell fate specification
-
Davidson EH (1990) How embryos work: A comparative view of diverse modes of cell fate specification. Development 108(3):365-389.
-
(1990)
Development
, vol.108
, Issue.3
, pp. 365-389
-
-
Davidson, E.H.1
-
3
-
-
43149086112
-
Global regulatory logic for specification of an embryonic cell lineage
-
Oliveri P, Tu Q, Davidson EH (2008) Global regulatory logic for specification of an embryonic cell lineage. Proc Natl Acad Sci USA 105(16):5955-5962.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.16
, pp. 5955-5962
-
-
Oliveri, P.1
Tu, Q.2
Davidson, E.H.3
-
4
-
-
71149103484
-
Modularity and design principles in the sea urchin embryo gene regulatory network
-
Peter IS, Davidson EH (2009) Modularity and design principles in the sea urchin embryo gene regulatory network. FEBS Lett 583(24):3948-3958.
-
(2009)
FEBS Lett
, vol.583
, Issue.24
, pp. 3948-3958
-
-
Peter, I.S.1
Davidson, E.H.2
-
5
-
-
77951205560
-
The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage
-
Peter IS, Davidson EH (2010) The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage. Dev Biol 340(2):188-199.
-
(2010)
Dev Biol
, vol.340
, Issue.2
, pp. 188-199
-
-
Peter, I.S.1
Davidson, E.H.2
-
6
-
-
79959853681
-
A gene regulatory network controlling the embryonic specification of endoderm
-
Peter IS, Davidson EH (2011) A gene regulatory network controlling the embryonic specification of endoderm. Nature 474(7353):635-639.
-
(2011)
Nature
, vol.474
, Issue.7353
, pp. 635-639
-
-
Peter, I.S.1
Davidson, E.H.2
-
7
-
-
84867349994
-
Predictive computation of genomic logic processing functions in embryonic development
-
Peter IS, Faure E, Davidson EH (2012) Predictive computation of genomic logic processing functions in embryonic development. Proc Natl Acad Sci USA 109(41): 16434-16442.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.41
, pp. 16434-16442
-
-
Peter, I.S.1
Faure, E.2
Davidson, E.H.3
-
8
-
-
84873524360
-
Diversification of oral and aboral mesodermal regulatory states in pregastrular sea urchin embryos
-
Materna SC, Ransick A, Li E, Davidson EH (2013) Diversification of oral and aboral mesodermal regulatory states in pregastrular sea urchin embryos. Dev Biol 375(1): 92-104.
-
(2013)
Dev Biol
, vol.375
, Issue.1
, pp. 92-104
-
-
Materna, S.C.1
Ransick, A.2
Li, E.3
Davidson, E.H.4
-
9
-
-
84884414125
-
New regulatory circuit controlling spatial and temporal gene expression in the sea urchin embryo oral ectoderm GRN
-
Li E, Materna SC, Davidson EH (2013) New regulatory circuit controlling spatial and temporal gene expression in the sea urchin embryo oral ectoderm GRN. Dev Biol 382(1):268-279.
-
(2013)
Dev Biol
, vol.382
, Issue.1
, pp. 268-279
-
-
Li, E.1
Materna, S.C.2
Davidson, E.H.3
-
10
-
-
84865157367
-
Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo
-
Li E, Materna SC, Davidson EH (2012) Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo. Dev Biol 369(2):377-385.
-
(2012)
Dev Biol
, vol.369
, Issue.2
, pp. 377-385
-
-
Li, E.1
Materna, S.C.2
Davidson, E.H.3
-
11
-
-
67349171520
-
A perturbation model of the gene regulatory network for oral and aboral ectoderm specification in the sea urchin embryo
-
Su YH, et al. (2009) A perturbation model of the gene regulatory network for oral and aboral ectoderm specification in the sea urchin embryo. Dev Biol 329(2):410-421.
-
(2009)
Dev Biol
, vol.329
, Issue.2
, pp. 410-421
-
-
Su, Y.H.1
-
12
-
-
84872417517
-
Gene regulatory control in the sea urchin aboral ectoderm: Spatial initiation, signaling inputs, and cell fate lockdown
-
Ben-Tabou de-Leon S, Su YH, Lin KT, Li E, Davidson EH (2013) Gene regulatory control in the sea urchin aboral ectoderm: Spatial initiation, signaling inputs, and cell fate lockdown. Dev Biol 374(1):245-254.
-
(2013)
Dev Biol
, vol.374
, Issue.1
, pp. 245-254
-
-
Ben-Tabou De-Leon, S.1
Su, Y.H.2
Lin, K.T.3
Li, E.4
Davidson, E.H.5
-
13
-
-
84858078505
-
Cis-regulatory logic driving glial cells missing: Selfsustaining circuitry in later embryogenesis
-
Ransick A, Davidson EH (2012) Cis-regulatory logic driving glial cells missing: Selfsustaining circuitry in later embryogenesis. Dev Biol 364(2):259-267.
-
(2012)
Dev Biol
, vol.364
, Issue.2
, pp. 259-267
-
-
Ransick, A.1
Davidson, E.H.2
-
14
-
-
37749029445
-
A Wnt-FoxQ2-nodal pathway links primary and secondary axis specification in sea urchin embryos
-
Yaguchi S, Yaguchi J, Angerer RC, Angerer LM (2008) A Wnt-FoxQ2-nodal pathway links primary and secondary axis specification in sea urchin embryos. Dev Cell 14(1): 97-107.
-
(2008)
Dev Cell
, vol.14
, Issue.1
, pp. 97-107
-
-
Yaguchi, S.1
Yaguchi, J.2
Angerer, R.C.3
Angerer, L.M.4
-
15
-
-
67449168538
-
The sea urchin animal pole domain is a Six3-dependent neurogenic patterning center
-
Wei Z, Yaguchi J, Yaguchi S, Angerer RC, Angerer LM (2009) The sea urchin animal pole domain is a Six3-dependent neurogenic patterning center. Development 136(7): 1179-1189.
-
(2009)
Development
, vol.136
, Issue.7
, pp. 1179-1189
-
-
Wei, Z.1
Yaguchi, J.2
Yaguchi, S.3
Angerer, R.C.4
Angerer, L.M.5
-
16
-
-
77956628617
-
High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development
-
Materna SC, Nam J, Davidson EH (2010) High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development. Gene Expr Patterns 10(4-5):177-184.
-
(2010)
Gene Expr Patterns
, vol.10
, Issue.4-5
, pp. 177-184
-
-
Materna, S.C.1
Nam, J.2
Davidson, E.H.3
-
17
-
-
84873856662
-
Integration of canonical and noncanonical Wnt signaling pathways patterns the neuroectoderm along the anterior-posterior axis of sea urchin embryos
-
Range RC, Angerer RC, Angerer LM (2013) Integration of canonical and noncanonical Wnt signaling pathways patterns the neuroectoderm along the anterior-posterior axis of sea urchin embryos. PLoS Biol 11(1):e1001467.
-
(2013)
PLoS Biol
, vol.11
, Issue.1
-
-
Range, R.C.1
Angerer, R.C.2
Angerer, L.M.3
-
18
-
-
33751520928
-
The C2H2 zinc finger genes of Strongylocentrotus purpuratus and their expression in embryonic development
-
Materna SC, Howard-Ashby M, Gray RF, Davidson EH (2006) The C2H2 zinc finger genes of Strongylocentrotus purpuratus and their expression in embryonic development. Dev Biol 300(1):108-120.
-
(2006)
Dev Biol
, vol.300
, Issue.1
, pp. 108-120
-
-
Materna, S.C.1
Howard-Ashby, M.2
Gray, R.F.3
Davidson, E.H.4
-
19
-
-
33947396707
-
Development: Built to run, not fail
-
Oliveri P, Davidson EH (2007) Development: Built to run, not fail. Science 315(5818): 1510-1511.
-
(2007)
Science
, vol.315
, Issue.5818
, pp. 1510-1511
-
-
Oliveri, P.1
Davidson, E.H.2
-
20
-
-
78650362376
-
Emerging properties of animal gene regulatory networks
-
Davidson EH (2010) Emerging properties of animal gene regulatory networks. Nature 468(7326):911-920.
-
(2010)
Nature
, vol.468
, Issue.7326
, pp. 911-920
-
-
Davidson, E.H.1
-
21
-
-
0042386678
-
Tight regulation of SpSoxB factors is required for patterning and morphogenesis in sea urchin embryos
-
Kenny AP, Oleksyn DW, Newman LA, Angerer RC, Angerer LM (2003) Tight regulation of SpSoxB factors is required for patterning and morphogenesis in sea urchin embryos. Dev Biol 261(2):412-425.
-
(2003)
Dev Biol
, vol.261
, Issue.2
, pp. 412-425
-
-
Kenny, A.P.1
Oleksyn, D.W.2
Newman, L.A.3
Angerer, R.C.4
Angerer, L.M.5
-
22
-
-
0036607585
-
New early zygotic regulators expressed in endomesoderm of sea urchin embryos discovered by differential array hybridization
-
Ransick A, Rast JP, Minokawa T, Calestani C, Davidson EH (2002) New early zygotic regulators expressed in endomesoderm of sea urchin embryos discovered by differential array hybridization. Dev Biol 246(1):132-147.
-
(2002)
Dev Biol
, vol.246
, Issue.1
, pp. 132-147
-
-
Ransick, A.1
Rast, J.P.2
Minokawa, T.3
Calestani, C.4
Davidson, E.H.5
-
23
-
-
34548858215
-
A global view of gene expression in lithium and zinc treated sea urchin embryos: New components of gene regulatory networks
-
Poustka AJ, et al. (2007) A global view of gene expression in lithium and zinc treated sea urchin embryos: New components of gene regulatory networks. Genome Biol 8(5):R85.
-
(2007)
Genome Biol
, vol.8
, Issue.5
-
-
Poustka, A.J.1
-
24
-
-
34249876002
-
Cis-regulatory control of the nodal gene, initiator of the sea urchin oral ectoderm gene network
-
Nam J, et al. (2007) Cis-regulatory control of the nodal gene, initiator of the sea urchin oral ectoderm gene network. Dev Biol 306(2):860-869.
-
(2007)
Dev Biol
, vol.306
, Issue.2
, pp. 860-869
-
-
Nam, J.1
-
25
-
-
79951677809
-
Oxygen, pH, and oral-aboral axis specification in the sea urchin embryo
-
Coluccio AE, LaCasse TJ, Coffman JA (2011) Oxygen, pH, and oral-aboral axis specification in the sea urchin embryo. Mol Reprod Dev 78(2):68.
-
(2011)
Mol Reprod Dev
, vol.78
, Issue.2
, pp. 68
-
-
Coluccio, A.E.1
Lacasse, T.J.2
Coffman, J.A.3
-
26
-
-
67349143114
-
Oral-aboral axis specification in the sea urchin embryo III. Role of mitochondrial redox signaling via H2O2
-
Coffman JA, Coluccio A, Planchart A, Robertson AJ (2009) Oral-aboral axis specification in the sea urchin embryo III. Role of mitochondrial redox signaling via H2O2. Dev Biol 330(1):123-130.
-
(2009)
Dev Biol
, vol.330
, Issue.1
, pp. 123-130
-
-
Coffman, J.A.1
Coluccio, A.2
Planchart, A.3
Robertson, A.J.4
-
27
-
-
4043091372
-
Oral-aboral axis specification in the sea urchin embryo II. Mitochondrial distribution and redox state contribute to establishing polarity in Strongylocentrotus purpuratus
-
Coffman JA, McCarthy JJ, Dickey-Sims C, Robertson AJ (2004) Oral-aboral axis specification in the sea urchin embryo II. Mitochondrial distribution and redox state contribute to establishing polarity in Strongylocentrotus purpuratus. Dev Biol 273(1): 160-171.
-
(2004)
Dev Biol
, vol.273
, Issue.1
, pp. 160-171
-
-
Coffman, J.A.1
McCarthy, J.J.2
Dickey-Sims, C.3
Robertson, A.J.4
-
28
-
-
0035253391
-
Oral-aboral axis specification in the sea urchin embryo. I. Axis entrainment by respiratory asymmetry
-
Coffman JA, Davidson EH (2001) Oral-aboral axis specification in the sea urchin embryo. I. Axis entrainment by respiratory asymmetry. Dev Biol 230(1):18-28.
-
(2001)
Dev Biol
, vol.230
, Issue.1
, pp. 18-28
-
-
Coffman, J.A.1
Davidson, E.H.2
-
29
-
-
73649110278
-
Nodal and BMP2/4 pattern the mesoderm and endoderm during development of the sea urchin embryo
-
Duboc V, et al. (2010) Nodal and BMP2/4 pattern the mesoderm and endoderm during development of the sea urchin embryo. Development 137(2):223-235.
-
(2010)
Development
, vol.137
, Issue.2
, pp. 223-235
-
-
Duboc, V.1
-
30
-
-
12144288504
-
Nodal and BMP2/4 signaling organizes the oral-aboral axis of the sea urchin embryo
-
Duboc V, Röttinger E, Besnardeau L, Lepage T (2004) Nodal and BMP2/4 signaling organizes the oral-aboral axis of the sea urchin embryo. Dev Cell 6(3):397-410.
-
(2004)
Dev Cell
, vol.6
, Issue.3
, pp. 397-410
-
-
Duboc, V.1
Röttinger, E.2
Besnardeau, L.3
Lepage, T.4
-
31
-
-
0030831284
-
The allocation of early blastomeres to the ectoderm and endoderm is variable in the sea urchin embryo
-
Logan CY, McClay DR (1997) The allocation of early blastomeres to the ectoderm and endoderm is variable in the sea urchin embryo. Development 124(11):2213-2223.
-
(1997)
Development
, vol.124
, Issue.11
, pp. 2213-2223
-
-
Logan, C.Y.1
McClay, D.R.2
-
32
-
-
0032008552
-
Late specification of Veg1 lineages to endodermal fate in the sea urchin embryo
-
Ransick A, Davidson EH (1998) Late specification of Veg1 lineages to endodermal fate in the sea urchin embryo. Dev Biol 195(1):38-48.
-
(1998)
Dev Biol
, vol.195
, Issue.1
, pp. 38-48
-
-
Ransick, A.1
Davidson, E.H.2
-
33
-
-
84888872777
-
Short-range Wnt5 signaling initiates specification of sea urchin posterior ectoderm
-
McIntyre DC, Seay NW, Croce JC, McClay DR (2013) Short-range Wnt5 signaling initiates specification of sea urchin posterior ectoderm. Development 140(24):4881-4889.
-
(2013)
Development
, vol.140
, Issue.24
, pp. 4881-4889
-
-
McIntyre, D.C.1
Seay, N.W.2
Croce, J.C.3
McClay, D.R.4
-
34
-
-
78650699481
-
Ancestral regulatory circuits governing ectoderm patterning downstream of Nodal and BMP2/4 revealed by gene regulatory network analysis in an echinoderm
-
Saudemont A, et al. (2010) Ancestral regulatory circuits governing ectoderm patterning downstream of Nodal and BMP2/4 revealed by gene regulatory network analysis in an echinoderm. PLoS Genet 6(12):e1001259.
-
(2010)
PLoS Genet
, vol.6
, Issue.12
-
-
Saudemont, A.1
-
35
-
-
36148930606
-
Cis-regulatory analysis of nodal and maternal control of dorsalventral axis formation by Univin, a TGF-beta related to Vg1
-
Range R, et al. (2007) Cis-regulatory analysis of nodal and maternal control of dorsalventral axis formation by Univin, a TGF-beta related to Vg1. Development 134(20): 3649-3664.
-
(2007)
Development
, vol.134
, Issue.20
, pp. 3649-3664
-
-
Range, R.1
-
36
-
-
33748331175
-
Hindgut specification and cell-adhesion functions of Sphox11/13b in the endoderm of the sea urchin embryo
-
Arenas-Mena C, Cameron RA, Davidson EH (2006) Hindgut specification and cell-adhesion functions of Sphox11/13b in the endoderm of the sea urchin embryo. Dev Growth Differ 48(7):463-472.
-
(2006)
Dev Growth Differ
, vol.48
, Issue.7
, pp. 463-472
-
-
Arenas-Mena, C.1
Cameron, R.A.2
Davidson, E.H.3
-
37
-
-
84867146009
-
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis
-
Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH (2012) Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Genome Res 22(10):2079-2087.
-
(2012)
Genome Res
, vol.22
, Issue.10
, pp. 2079-2087
-
-
Tu, Q.1
Cameron, R.A.2
Worley, K.C.3
Gibbs, R.A.4
Davidson, E.H.5
-
38
-
-
0027437450
-
Whole mount in situ hybridization shows Endo 16 to be a marker for the vegetal plate territory in sea urchin embryos
-
Ransick A, Ernst S, Britten RJ, Davidson EH (1993) Whole mount in situ hybridization shows Endo 16 to be a marker for the vegetal plate territory in sea urchin embryos. Mech Dev 42(3):117-124.
-
(1993)
Mech Dev
, vol.42
, Issue.3
, pp. 117-124
-
-
Ransick, A.1
Ernst, S.2
Britten, R.J.3
Davidson, E.H.4
|