-
1
-
-
49449094873
-
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
-
Abad P., Gouzy J., Aury J.M., Castagnone-Sereno P., Danchin E.G., et al. Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nat. Biotechnol. 2008, 26:909-915. 10.1038/nbt.1482.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 909-915
-
-
Abad, P.1
Gouzy, J.2
Aury, J.M.3
Castagnone-Sereno, P.4
Danchin, E.G.5
-
2
-
-
73149098975
-
Inhibition of HSP90 with pochoximes: SAR and structure-based insights
-
Barluenga S., Fontaine J.G., Wang C., Aouadi K., Chen R., Beebe K., Neckers L., Winssinger N. Inhibition of HSP90 with pochoximes: SAR and structure-based insights. Chem. Biochem. 2009, 10:2753-2759. 10.1002/cbic.200900494.
-
(2009)
Chem. Biochem.
, vol.10
, pp. 2753-2759
-
-
Barluenga, S.1
Fontaine, J.G.2
Wang, C.3
Aouadi, K.4
Chen, R.5
Beebe, K.6
Neckers, L.7
Winssinger, N.8
-
3
-
-
84867731209
-
Microbial carbohydrate esterases deacetylating plant polysaccharides
-
Biely P. Microbial carbohydrate esterases deacetylating plant polysaccharides. Biotechnol. Adv. 2012, 30:1575-1588. 10.1016/j.biotechadv.2012.04.010.
-
(2012)
Biotechnol. Adv.
, vol.30
, pp. 1575-1588
-
-
Biely, P.1
-
4
-
-
84976003047
-
The tylenchid (Nematoda) egg shell: structure, composition and permeability
-
Bird A.F., McClure M.A. The tylenchid (Nematoda) egg shell: structure, composition and permeability. Parasitology 1976, 72:19-28. 10.1017/S0031182000043158.
-
(1976)
Parasitology
, vol.72
, pp. 19-28
-
-
Bird, A.F.1
McClure, M.A.2
-
5
-
-
0036234121
-
Colonization of plant roots by egg-parasitic and nematode-trapping fungi
-
Bordallo J.J., Lopez-Llorca L.V., Jansson H.-B., Salinas J., Persmark L., Asensio L. Colonization of plant roots by egg-parasitic and nematode-trapping fungi. New Phytol. 2002, 154:491-499. 10.1046/j.1469-8137.2002.00399.x.
-
(2002)
New Phytol.
, vol.154
, pp. 491-499
-
-
Bordallo, J.J.1
Lopez-Llorca, L.V.2
Jansson, H.-B.3
Salinas, J.4
Persmark, L.5
Asensio, L.6
-
6
-
-
70349247809
-
Antagonism of plant parasitic nematodes by fungi
-
Springer, Berlin, C.P. Kubicek, I.S. Druzhinina (Eds.)
-
Casas-Flores S., Herrera-Estrella A. Antagonism of plant parasitic nematodes by fungi. The Mycota 2007, 147-157. Springer, Berlin, http://dx.doi.org/10.1007/978-3-540-71840-6_9. C.P. Kubicek, I.S. Druzhinina (Eds.).
-
(2007)
The Mycota
, pp. 147-157
-
-
Casas-Flores, S.1
Herrera-Estrella, A.2
-
7
-
-
77957151956
-
SolexaQA: at-a-glance quality assessment of Illumina second-generation sequencing data
-
Cox M.P., Peterson D.A., Biggs P.J. SolexaQA: at-a-glance quality assessment of Illumina second-generation sequencing data. BMC Bioinform. 2010, 11:485. 10.1186/1471-2105-11-485.
-
(2010)
BMC Bioinform.
, vol.11
, pp. 485
-
-
Cox, M.P.1
Peterson, D.A.2
Biggs, P.J.3
-
8
-
-
0033213017
-
Magnaporthe grisea pth11p is a novel plasma membrane protein that mediates appressorium differentiation in response to inductive substrate cues
-
DeZwaan T.M., Carroll A.M., Valent B., Sweigard J.A. Magnaporthe grisea pth11p is a novel plasma membrane protein that mediates appressorium differentiation in response to inductive substrate cues. Plant Cell 1999, 11:2013-2030. 10.1105/tpc.11.10.2013.
-
(1999)
Plant Cell
, vol.11
, pp. 2013-2030
-
-
DeZwaan, T.M.1
Carroll, A.M.2
Valent, B.3
Sweigard, J.A.4
-
9
-
-
80655129474
-
Efficiency of Pochonia chlamydosporia in Meloidogyne incognita control in lettuce crop (Lactuca sativa L.)
-
Dias-Arieira C.R., Santana S.M., de Freitas L.G., da Cunha T.P.L., Biela F., Puerari H.H., Chiamolera F.M. Efficiency of Pochonia chlamydosporia in Meloidogyne incognita control in lettuce crop (Lactuca sativa L.). J. Food Agric. Environ. 2011, 9:561-563.
-
(2011)
J. Food Agric. Environ.
, vol.9
, pp. 561-563
-
-
Dias-Arieira, C.R.1
Santana, S.M.2
de Freitas, L.G.3
da Cunha, T.P.L.4
Biela, F.5
Puerari, H.H.6
Chiamolera, F.M.7
-
10
-
-
84896137026
-
Compendium of Soil Fungi
-
IHW-Verlag, Regensburg, Germany
-
Domsch K.H., Gams W., Anderson T-H. Compendium of Soil Fungi. vol. I 1993, IHW-Verlag, Regensburg, Germany, pp. 834-836.
-
(1993)
vol. I
, pp. 834-836
-
-
Domsch, K.H.1
Gams, W.2
Anderson, T.-H.3
-
11
-
-
77949589550
-
Evaluation of Pochonia chlamydosporia var. chlamydosporia as a control agent of Meloidogyne javanica on pistachio
-
Ebadi M., Fatemy S., Riahi H. Evaluation of Pochonia chlamydosporia var. chlamydosporia as a control agent of Meloidogyne javanica on pistachio. Biocontrol Sci. Technol. 2009, 19:689-700. 10.1080/09583150903051844.
-
(2009)
Biocontrol Sci. Technol.
, vol.19
, pp. 689-700
-
-
Ebadi, M.1
Fatemy, S.2
Riahi, H.3
-
12
-
-
84865513147
-
Effects on plant growth and root-knot nematode infection of an endophytic GFP transformant of the nematophagous fungus Pochonia chlamydosporia
-
Escudero N., Lopez-Llorca L.V. Effects on plant growth and root-knot nematode infection of an endophytic GFP transformant of the nematophagous fungus Pochonia chlamydosporia. Symbiosis 2012, 57:33-42. 10.1007/s13199-012-0173-3.
-
(2012)
Symbiosis
, vol.57
, pp. 33-42
-
-
Escudero, N.1
Lopez-Llorca, L.V.2
-
13
-
-
78249277408
-
Mrt, a gene unique to fungi, encodes an oligosaccharide transporter and facilitates rhizosphere competency in Metarhizium robertsii
-
Fang W., St.Leger R.J. Mrt, a gene unique to fungi, encodes an oligosaccharide transporter and facilitates rhizosphere competency in Metarhizium robertsii. Plant Physiol. 2010, 154:1549-1557. 10.1104/pp.110.163014.
-
(2010)
Plant Physiol.
, vol.154
, pp. 1549-1557
-
-
Fang, W.1
St Leger, R.J.2
-
14
-
-
60649103559
-
Protein kinase A regulates production of virulence determinants by the entomopathogenic fungus, Metarhizium robertsii
-
Fang W., Pava-Ripoll M., Wang S., St.Leger R. Protein kinase A regulates production of virulence determinants by the entomopathogenic fungus, Metarhizium robertsii. Fungal Genet. Biol. 2009, 46:277-285. 10.1016/j.fgb.2008.
-
(2009)
Fungal Genet. Biol.
, vol.46
, pp. 277-285
-
-
Fang, W.1
Pava-Ripoll, M.2
Wang, S.3
St Leger, R.4
-
15
-
-
28844461287
-
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae
-
Galagan J.E., Calvo S.E., Cuomo C., Ma L.J., Wortman J.R., Batzoglou S., Lee S.I., Basturkmen M., Spevak C.C., Clutterbuck J., et al. Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 2005, 438(7071):1105-1115.
-
(2005)
Nature
, vol.438
, Issue.7071
, pp. 1105-1115
-
-
Galagan, J.E.1
Calvo, S.E.2
Cuomo, C.3
Ma, L.J.4
Wortman, J.R.5
Batzoglou, S.6
Lee, S.I.7
Basturkmen, M.8
Spevak, C.C.9
Clutterbuck, J.10
-
16
-
-
79851472311
-
Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum
-
Gao Q., Jin K., Ying S.H., Zhang Y., Xiao G., Shang Y., Duan Z., Hu X., Xie X.Q., Zhou G., et al. Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum. PLoS Genet. 2011, 7(1):e1001264.
-
(2011)
PLoS Genet.
, vol.7
, Issue.1
-
-
Gao, Q.1
Jin, K.2
Ying, S.H.3
Zhang, Y.4
Xiao, G.5
Shang, Y.6
Duan, Z.7
Hu, X.8
Xie, X.Q.9
Zhou, G.10
-
17
-
-
84867464292
-
The hierarchical structure and mechanics of plant materials
-
doi:10.1098/rsif.2012.0341
-
Gibson L.J. The hierarchical structure and mechanics of plant materials. J. R. Soc. Interface 2012, 9:2749-2766. doi:10.1098/rsif.2012.0341.
-
(2012)
J. R. Soc. Interface
, vol.9
, pp. 2749-2766
-
-
Gibson, L.J.1
-
18
-
-
53849100305
-
Fungal chitinases and their biological role in the antagonism onto nematode eggs. A review
-
Gortari M.C., Hours R.A. Fungal chitinases and their biological role in the antagonism onto nematode eggs. A review. Mycol. Prog. 2008, 7:221-238. 10.1007/s11557-008-0571-3.
-
(2008)
Mycol. Prog.
, vol.7
, pp. 221-238
-
-
Gortari, M.C.1
Hours, R.A.2
-
19
-
-
0037528210
-
Pochonins A-F, new antiviral and antiparasitic resorcylic acid lactones from Pochonia chlamydosporia var. catenulata
-
Hellwig V., Mayer-Bartschmid A., Müller H., Greif G., Kleymann G., Zitzmann W., Tichy H.-V., Stadler M. Pochonins A-F, new antiviral and antiparasitic resorcylic acid lactones from Pochonia chlamydosporia var. catenulata. J. Nat. Prod. 2003, 66:829-837. 10.1021/np020556v.
-
(2003)
J. Nat. Prod.
, vol.66
, pp. 829-837
-
-
Hellwig, V.1
Mayer-Bartschmid, A.2
Müller, H.3
Greif, G.4
Kleymann, G.5
Zitzmann, W.6
Tichy, H.-V.7
Stadler, M.8
-
20
-
-
84055178433
-
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects
-
Holt C., Yandell M. MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects. BMC Bioinform. 2011, 22(12):491.
-
(2011)
BMC Bioinform.
, vol.22
, Issue.12
, pp. 491
-
-
Holt, C.1
Yandell, M.2
-
21
-
-
9644295615
-
Extracellular enzymes serving as virulence factors in nematophagous fungi involved in infection of the host
-
Huang X., Zhao N., Zhang K. Extracellular enzymes serving as virulence factors in nematophagous fungi involved in infection of the host. Res. Microbiol. 2004, 115:811-816. http://dx.doi.org/10.1016/j.resmic.2004.07.003.
-
(2004)
Res. Microbiol.
, vol.115
, pp. 811-816
-
-
Huang, X.1
Zhao, N.2
Zhang, K.3
-
22
-
-
25444443911
-
A metalloproteinase of Coccidioides posadasii contributes to evasion of host detection
-
Hung C.Y., Seshan K.R., Yu J.J., Schaller R., Xue J., Basrur V., Gardner M.J., Cole G.T. A metalloproteinase of Coccidioides posadasii contributes to evasion of host detection. Infect. Immun. 2005, 73:6689-6703. http://dx.doi.org/10.1128/IAI.73.10.6689-6703.2005.
-
(2005)
Infect. Immun.
, vol.73
, pp. 6689-6703
-
-
Hung, C.Y.1
Seshan, K.R.2
Yu, J.J.3
Schaller, R.4
Xue, J.5
Basrur, V.6
Gardner, M.J.7
Cole, G.T.8
-
23
-
-
84866276946
-
Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina
-
Islam M.S., Haque M.S., Islam M.M., Emdad E.M., Halim A., Hossen Q.M., Hossain M.Z., Ahmed B., et al. Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina. BMC Genomics 2012, 13:e493. 10.1186/1471-2164-13-493.
-
(2012)
BMC Genomics
, vol.13
-
-
Islam, M.S.1
Haque, M.S.2
Islam, M.M.3
Emdad, E.M.4
Halim, A.5
Hossen, Q.M.6
Hossain, M.Z.7
Ahmed, B.8
-
24
-
-
77955076707
-
Assembling genomes using short-read sequencing technology
-
Jackman S.D., Birol I. Assembling genomes using short-read sequencing technology. Genome Biol. 2010, 11:e202. 10.1186/gb-2010-11-1-202.
-
(2010)
Genome Biol.
, vol.11
-
-
Jackman, S.D.1
Birol, I.2
-
25
-
-
0034254266
-
Direct interaction of resistance gene and avirulence gene products confers rice blast resistance
-
Jia Y., McAdams S.A., Bryan G.T., Hershey H.P., Valent B. Direct interaction of resistance gene and avirulence gene products confers rice blast resistance. EMBO J. 2000, 19:4004-4014. 10.1093/emboj/19.15.4004.
-
(2000)
EMBO J.
, vol.19
, pp. 4004-4014
-
-
Jia, Y.1
McAdams, S.A.2
Bryan, G.T.3
Hershey, H.P.4
Valent, B.5
-
26
-
-
34948881163
-
Distribution of NRPS gene families within the neotyphodium/epichloë complex
-
Johnson R., Voisey C., Johnson L., Pratt J., Fleetwood D., Khan A., Bryan G. Distribution of NRPS gene families within the neotyphodium/epichloë complex. Fungal Genet. Biol. 2007, 44:1180-1190. 10.1016/j.fgb.2007.04.009.
-
(2007)
Fungal Genet. Biol.
, vol.44
, pp. 1180-1190
-
-
Johnson, R.1
Voisey, C.2
Johnson, L.3
Pratt, J.4
Fleetwood, D.5
Khan, A.6
Bryan, G.7
-
27
-
-
0033737312
-
Rhizosphere interactions and the exploitation of microbial agents for the biological control of plant-parasitic nematodes
-
Kerry B.R. Rhizosphere interactions and the exploitation of microbial agents for the biological control of plant-parasitic nematodes. Annu. Rev. Phytopathol. 2000, 38:423-441. 10.1146/annurev.phyto.38.1.423.
-
(2000)
Annu. Rev. Phytopathol.
, vol.38
, pp. 423-441
-
-
Kerry, B.R.1
-
28
-
-
77954427522
-
FASconCAT: convenient handling of data matrices
-
Kück P., Meusemann K. FASconCAT: convenient handling of data matrices. Mol. Phylogenet. Evol. 2010, 56:1115-1118. 10.1016/j.ympev.2010.04.024.
-
(2010)
Mol. Phylogenet. Evol.
, vol.56
, pp. 1115-1118
-
-
Kück, P.1
Meusemann, K.2
-
29
-
-
84860671947
-
Opprimo ergo sum-evasion and suppression in the root endophytic fungus Piriformospora indica
-
Lahrmann U., Zuccaro A. Opprimo ergo sum-evasion and suppression in the root endophytic fungus Piriformospora indica. Mol. Plant Microbe Interact. 2012, 25:727-737. 10.1094/MPMI-11-11-0291.
-
(2012)
Mol. Plant Microbe Interact.
, vol.25
, pp. 727-737
-
-
Lahrmann, U.1
Zuccaro, A.2
-
30
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B., Trapnell C., Pop M., Salzberg S.L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10:R25. 10.1186/gb-2009-10-3-r25.
-
(2009)
Genome Biol.
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
31
-
-
84862893503
-
Gene cloning, molecular modeling, and phylogenetics of serine protease P32 and serine carboxypeptidase SCP1 from nematophagous fungi Pochonia rubescens and Pochonia chlamydosporia
-
Larriba E., Martín-Nieto J., Lopez-Llorca L.V. Gene cloning, molecular modeling, and phylogenetics of serine protease P32 and serine carboxypeptidase SCP1 from nematophagous fungi Pochonia rubescens and Pochonia chlamydosporia. Can. J. Microbiol. 2012, 58:815-827. 10.1139/W2012-054.
-
(2012)
Can. J. Microbiol.
, vol.58
, pp. 815-827
-
-
Larriba, E.1
Martín-Nieto, J.2
Lopez-Llorca, L.V.3
-
32
-
-
79955142868
-
Proteinortho: detection of (co-)orthologs in large-scale analysis
-
Lechner M., Findeiss S., Steiner L., Marz M., Stadler P.F., Prohaska S.J. Proteinortho: detection of (co-)orthologs in large-scale analysis. BMC Bioinform. 2011, 12:124. 10.1186/1471-2105-12-124.
-
(2011)
BMC Bioinform.
, vol.12
, pp. 124
-
-
Lechner, M.1
Findeiss, S.2
Steiner, L.3
Marz, M.4
Stadler, P.F.5
Prohaska, S.J.6
-
33
-
-
0030609167
-
G protein subunit genes control growth, development, and pathogenicity of Magnaporthe grisea
-
Liu S., Dean R.A. G protein subunit genes control growth, development, and pathogenicity of Magnaporthe grisea. Mol. Plant Microbe Interact. 1997, 10:1075-1086.
-
(1997)
Mol. Plant Microbe Interact.
, vol.10
, pp. 1075-1086
-
-
Liu, S.1
Dean, R.A.2
-
34
-
-
84861704384
-
How carnivorous fungi use three-celled constricting rings to trap nematodes
-
Liu K., Tian J., Xiang M., Liu X. How carnivorous fungi use three-celled constricting rings to trap nematodes. Prot. Cell. 2012, 3:325-328. 10.1007/s13238-012-2031-8.
-
(2012)
Prot. Cell.
, vol.3
, pp. 325-328
-
-
Liu, K.1
Tian, J.2
Xiang, M.3
Liu, X.4
-
35
-
-
38249009719
-
Immunocytochemical localization of a 32-kDa protease from the nematophagous fungus Verticillium suchlasporium in infected nematode eggs
-
Lopez-Llorca L.V., Robertson W.M. Immunocytochemical localization of a 32-kDa protease from the nematophagous fungus Verticillium suchlasporium in infected nematode eggs. Exp. Mycol. 1992, 16:261-267. 10.1016/0147-5975(92)90002-9.
-
(1992)
Exp. Mycol.
, vol.16
, pp. 261-267
-
-
Lopez-Llorca, L.V.1
Robertson, W.M.2
-
36
-
-
0036028102
-
Use of light and scanning electron microscopy to examine colonisation of barley rhizosphere by the nematophagous fungus Verticillium chlamydosporium
-
Lopez-Llorca L.V., Bordallo J.J., Salinas J., Monfort E., López-Serna M.L. Use of light and scanning electron microscopy to examine colonisation of barley rhizosphere by the nematophagous fungus Verticillium chlamydosporium. Micron 2002, 33:261-267. 10.1016/S0968-4328(00)00070-6.
-
(2002)
Micron
, vol.33
, pp. 261-267
-
-
Lopez-Llorca, L.V.1
Bordallo, J.J.2
Salinas, J.3
Monfort, E.4
López-Serna, M.L.5
-
37
-
-
0036066646
-
Pre-penetration events in fungal parasitism of nematode eggs
-
Lopez-Llorca L.V., Olivares-Bernabeu C., Salinas J., Jansson H.-B., Kolattukudy P.E. Pre-penetration events in fungal parasitism of nematode eggs. Mycol. Res. 2002, 106:499-506. 10.1017/S0953756202005798.
-
(2002)
Mycol. Res.
, vol.106
, pp. 499-506
-
-
Lopez-Llorca, L.V.1
Olivares-Bernabeu, C.2
Salinas, J.3
Jansson, H.-B.4
Kolattukudy, P.E.5
-
38
-
-
77649340861
-
Expression of serine proteases in egg-parasitic nematophagous fungi during barley root colonization
-
Lopez-Llorca L.V., Gómez-Vidal S., Monfort E., Larriba E., Casado-Vela J., Elortza F., Jansson H.-B., Salinas J., Martín-Nieto J. Expression of serine proteases in egg-parasitic nematophagous fungi during barley root colonization. Fungal Genet. Biol. 2010, 47:342-351. 10.1016/j.fgb.2010.01.004.
-
(2010)
Fungal Genet. Biol.
, vol.47
, pp. 342-351
-
-
Lopez-Llorca, L.V.1
Gómez-Vidal, S.2
Monfort, E.3
Larriba, E.4
Casado-Vela, J.5
Elortza, F.6
Jansson, H.-B.7
Salinas, J.8
Martín-Nieto, J.9
-
39
-
-
0030854739
-
TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
-
Lowe T.M., Eddy S.R. TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucl. Acids Res. 1997, 25:955-964. 10.1093/nar/25.5.955.
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
40
-
-
61649093336
-
Real-time PCR quantification and live-cell imaging of endophytic colonization of barley (Hordeum vulgare) roots by Fusarium equiseti and Pochonia chlamydosporia
-
Macia-Vicente J.G., Jansson H.-B., Talbot N.J., Lopez-Llorca L.V. Real-time PCR quantification and live-cell imaging of endophytic colonization of barley (Hordeum vulgare) roots by Fusarium equiseti and Pochonia chlamydosporia. New Phytol. 2009, 182:213-228. 10.1111/j.1469-8137.2008.02743.x.
-
(2009)
New Phytol.
, vol.182
, pp. 213-228
-
-
Macia-Vicente, J.G.1
Jansson, H.-B.2
Talbot, N.J.3
Lopez-Llorca, L.V.4
-
41
-
-
73149119588
-
Colonisation of barley roots by endophytic Fusarium equiseti and Pochonia chlamydosporia: effects on plant growth and disease
-
Macia-Vicente J.G., Rosso L.C., Ciancio A., Jansson H.-B., Lopez-Llorca L.V. Colonisation of barley roots by endophytic Fusarium equiseti and Pochonia chlamydosporia: effects on plant growth and disease. Ann. Appl. Biol. 2009, 155:391-401. 10.1111/j.1744-7348.2009.00352.x.
-
(2009)
Ann. Appl. Biol.
, vol.155
, pp. 391-401
-
-
Macia-Vicente, J.G.1
Rosso, L.C.2
Ciancio, A.3
Jansson, H.-B.4
Lopez-Llorca, L.V.5
-
42
-
-
80255127234
-
Cutadapt removes adapter sequences from high-throughput sequencing reads
-
Martin, M., 2011. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet.journal. <>. http://journal.embnet.org/index.php/embnetjournal/article/view/200.
-
(2011)
EMBnet.journal
-
-
Martin, M.1
-
43
-
-
77950296683
-
Cloning and overexpression of Pochonia chlamydosporia chitinase gene pcchi44, a potential virulence factor in infection against nematodes
-
Mi Q., Yang J., Ye F., Gan Z., Wu C., Niu X., Zou C., Zhang K.-Q. Cloning and overexpression of Pochonia chlamydosporia chitinase gene pcchi44, a potential virulence factor in infection against nematodes. Process Biochem. 2010, 45:810-814. 10.1016/j.procbio.2010.01.022.
-
(2010)
Process Biochem.
, vol.45
, pp. 810-814
-
-
Mi, Q.1
Yang, J.2
Ye, F.3
Gan, Z.4
Wu, C.5
Niu, X.6
Zou, C.7
Zhang, K.-Q.8
-
44
-
-
16244387198
-
Colonisation of seminal roots of wheat and barley by egg-parasitic nematophagous fungi and their effects on Gaeumannomyces graminis var. tritici and development of root-rot
-
Monfort E., Lopez-Llorca L.V., Jansson H.-B., Salinas J., Park J.O., Sivasithamparam K. Colonisation of seminal roots of wheat and barley by egg-parasitic nematophagous fungi and their effects on Gaeumannomyces graminis var. tritici and development of root-rot. Soil Biol. Biochem. 2005, 37:1229-1235. 10.1016/j.soilbio.2004.11.019.
-
(2005)
Soil Biol. Biochem.
, vol.37
, pp. 1229-1235
-
-
Monfort, E.1
Lopez-Llorca, L.V.2
Jansson, H.-B.3
Salinas, J.4
Park, J.O.5
Sivasithamparam, K.6
-
45
-
-
55149091122
-
Secreted proteases from dermatophytes
-
Monod M. Secreted proteases from dermatophytes. Mycopathologia 2008, 166:285-294. 10.1007/s11046-008-9105-4.
-
(2008)
Mycopathologia
, vol.166
, pp. 285-294
-
-
Monod, M.1
-
46
-
-
0032883207
-
Fungal resistance to plant antibiotics as a mechanism of pathogenesis
-
Morrissey J.P., Osbourn A.E. Fungal resistance to plant antibiotics as a mechanism of pathogenesis. Microbiol. Mol. Biol. Rev. 1999, 63:708-724.
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 708-724
-
-
Morrissey, J.P.1
Osbourn, A.E.2
-
47
-
-
0037269814
-
Cloning of and genetic variation in protease VCP1 from the nematophagous fungus Pochonia chlamydosporia
-
Morton C.O., Hirsch P.R., Peberdy J.F., Kerry B.R. Cloning of and genetic variation in protease VCP1 from the nematophagous fungus Pochonia chlamydosporia. Mycol. Res. 2003, 107:38-46. 10.1017/S0953756202007050.
-
(2003)
Mycol. Res.
, vol.107
, pp. 38-46
-
-
Morton, C.O.1
Hirsch, P.R.2
Peberdy, J.F.3
Kerry, B.R.4
-
48
-
-
0037449820
-
Inactivation of Kex2 diminishes the virulence of Candida albicans
-
Newport G., Kuo A., Flattery A., Gill C., Blake J.J., Kurtz M.B., Abruzzo G.K., Agabian N. Inactivation of Kex2 diminishes the virulence of Candida albicans. J. Biol. Chem. 2003, 278:1713-1720. 10.1074/jbc.M209713200.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 1713-1720
-
-
Newport, G.1
Kuo, A.2
Flattery, A.3
Gill, C.4
Blake, J.J.5
Kurtz, M.B.6
Abruzzo, G.K.7
Agabian, N.8
-
49
-
-
74849139261
-
Nematodetoxic aurovertin-type metabolites from a root-knot nematode parasitic fungus Pochonia chlamydosporia
-
Niu X.M., Wang Y.L., Chu Y.S., Xue H.X., Li N., Wei L.X., Mo M.H., Zhang K.Q. Nematodetoxic aurovertin-type metabolites from a root-knot nematode parasitic fungus Pochonia chlamydosporia. J. Agric. Food Chem. 2010, 58:828-834. 10.1021/jf903259n.
-
(2010)
J. Agric. Food Chem.
, vol.58
, pp. 828-834
-
-
Niu, X.M.1
Wang, Y.L.2
Chu, Y.S.3
Xue, H.X.4
Li, N.5
Wei, L.X.6
Mo, M.H.7
Zhang, K.Q.8
-
50
-
-
0034623005
-
T-Coffee: a novel method for fast and accurate multiple sequence alignment
-
Notredame C., Higgins D.G., Heringa J. T-Coffee: a novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 2000, 302:205-217. http://dx.doi.org/10.1006/jmbi.2000.4042.
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
51
-
-
38349084679
-
Effect of chitosan on hyphal growth and spore germination of plant pathogenic and biocontrol fungi
-
Palma-Guerrero J., Jansson H.-B., Salinas J., Lopez-Llorca L.V. Effect of chitosan on hyphal growth and spore germination of plant pathogenic and biocontrol fungi. J. Appl. Microbiol. 2008, 104:541-553. 10.1111/j.1365-2672.2007.03567.x.
-
(2008)
J. Appl. Microbiol.
, vol.104
, pp. 541-553
-
-
Palma-Guerrero, J.1
Jansson, H.-B.2
Salinas, J.3
Lopez-Llorca, L.V.4
-
52
-
-
38749105868
-
The MEROPS batch BLAST: a tool to detect peptidases their and non-peptidase homologues in a genome
-
Rawlings N.D., Morton F.R. The MEROPS batch BLAST: a tool to detect peptidases their and non-peptidase homologues in a genome. Biochimie 2008, 90:243-259. 10.1016/j.biochi.2007.09.014.
-
(2008)
Biochimie
, vol.90
, pp. 243-259
-
-
Rawlings, N.D.1
Morton, F.R.2
-
53
-
-
50049117282
-
Genes for the biosynthesis of the fungal polyketides hypothemycin from Hypomyces subiculosus and radicicol from Pochonia chlamydosporia
-
Reeves C.D., Hu Z., Reid R., Kealey J.T. Genes for the biosynthesis of the fungal polyketides hypothemycin from Hypomyces subiculosus and radicicol from Pochonia chlamydosporia. Appl. Environ. Microbiol. 2008, 74:5121-5129. 10.1128/AEM.00478-08.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 5121-5129
-
-
Reeves, C.D.1
Hu, Z.2
Reid, R.3
Kealey, J.T.4
-
54
-
-
79958183663
-
Transcriptome analysis shows differential gene expression in the saprotrophic to parasitic transition of Pochonia chlamydosporia
-
Rosso L.C., Finetti-Sialer M.M., Hirsch P.R., Ciancio A., Kerry B.R., Clark I.M. Transcriptome analysis shows differential gene expression in the saprotrophic to parasitic transition of Pochonia chlamydosporia. Appl. Microbiol. Biotechnol. 2011, 90:1981-1994. 10.1007/s00253-011-3282-7.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.90
, pp. 1981-1994
-
-
Rosso, L.C.1
Finetti-Sialer, M.M.2
Hirsch, P.R.3
Ciancio, A.4
Kerry, B.R.5
Clark, I.M.6
-
55
-
-
0036205377
-
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt H.A., Strimmer K., Vingron M., von Haeseler A. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 2002, 18:502-504.
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
56
-
-
56949084988
-
The search for a hair-growth stimulant: new radicicol analogues as WNT-5A expression inhibitors from Pochonia chlamydosporia var. chlamydosporia
-
Shinonaga H., Kawamura Y., Ikeda A., Aoki M., Sakai N., Fujimoto N., Kawashima A. The search for a hair-growth stimulant: new radicicol analogues as WNT-5A expression inhibitors from Pochonia chlamydosporia var. chlamydosporia. Tetrahedron Lett. 2009, 50:108-110. 10.1016/j.tetlet.2008.10.099.
-
(2009)
Tetrahedron Lett.
, vol.50
, pp. 108-110
-
-
Shinonaga, H.1
Kawamura, Y.2
Ikeda, A.3
Aoki, M.4
Sakai, N.5
Fujimoto, N.6
Kawashima, A.7
-
57
-
-
34249776327
-
Decoding the mannitol enigma in filamentous fungi
-
Solomon P.S., Waters O.D.C., Oliver R.P. Decoding the mannitol enigma in filamentous fungi. Trends Microbiol. 2007, 15:257-262. 10.1016/j.tim.2007.04.002.
-
(2007)
Trends Microbiol.
, vol.15
, pp. 257-262
-
-
Solomon, P.S.1
Waters, O.D.C.2
Oliver, R.P.3
-
58
-
-
79953664350
-
Regulation of innate immune response to Candida albicans infections by αMβ2-Pra1p interaction
-
Soloviev D.A., Jawhara S., Fonzi W.A. Regulation of innate immune response to Candida albicans infections by αMβ2-Pra1p interaction. Infect. Immun. 2011, 79:1546-1558. 10.1128/IAI.00650-10.
-
(2011)
Infect. Immun.
, vol.79
, pp. 1546-1558
-
-
Soloviev, D.A.1
Jawhara, S.2
Fonzi, W.A.3
-
59
-
-
0002837584
-
The role of cuticle-degrading proteases in fungal pathogenesis of insects
-
St.Leger R. The role of cuticle-degrading proteases in fungal pathogenesis of insects. Can. J. Bot. 1995, 73:1119-1125. 10.1139/b95-367.
-
(1995)
Can. J. Bot.
, vol.73
, pp. 1119-1125
-
-
St Leger, R.1
-
60
-
-
0001261901
-
Prepenetration events during infection of host cuticle by Metarhizium anisopliae
-
St.Leger R.J., Goettel M., Roberts D.W., Staples R.C. Prepenetration events during infection of host cuticle by Metarhizium anisopliae. J. Invertebr. Pathol. 1991, 58:168-179. 10.1016/0022-2011(91)90061-T.
-
(1991)
J. Invertebr. Pathol.
, vol.58
, pp. 168-179
-
-
St Leger, R.J.1
Goettel, M.2
Roberts, D.W.3
Staples, R.C.4
-
61
-
-
33747830848
-
AUGUSTUS: ab initio prediction of alternative transcripts
-
Stanke M., Keller O., Gunduz I., Hayes A., Waack S., Morgenstern B. AUGUSTUS: ab initio prediction of alternative transcripts. Nucl. Acids. Res. 2006, 34:W435-W439.
-
(2006)
Nucl. Acids. Res.
, vol.34
-
-
Stanke, M.1
Keller, O.2
Gunduz, I.3
Hayes, A.4
Waack, S.5
Morgenstern, B.6
-
62
-
-
75149150388
-
TreeGraph 2: combining and visualizing evidence from different phylogenetic analyses
-
Stöver B.C., Müller K.F. TreeGraph 2: combining and visualizing evidence from different phylogenetic analyses. BMC Bioinform. 2010, 11:7. 10.1186/1471-2105-11-7.
-
(2010)
BMC Bioinform.
, vol.11
, pp. 7
-
-
Stöver, B.C.1
Müller, K.F.2
-
63
-
-
34347350016
-
Phylogenetic classification of Cordyceps and the clavicipitaceous fungi
-
Sung G.-H., Hywel-Jones N.L., Sung J.-M., Luangsa-ard J.J., Shrestha B., Spatafora J.W. Phylogenetic classification of Cordyceps and the clavicipitaceous fungi. Stud. Mycol. 2007, 57:5-59. 10.3114/sim.2007.57.01.
-
(2007)
Stud. Mycol.
, vol.57
, pp. 5-59
-
-
Sung, G.-H.1
Hywel-Jones, N.L.2
Sung, J.-M.3
Luangsa-ard, J.J.4
Shrestha, B.5
Spatafora, J.W.6
-
64
-
-
57149099395
-
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training
-
Ter-Hovhannisyan V., Lomsadze A., Chernoff Y.O., Borodovsky M. Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training. Genome Res. 2008, 18:1979-1990. 10.1101/gr.081612.108.
-
(2008)
Genome Res.
, vol.18
, pp. 1979-1990
-
-
Ter-Hovhannisyan, V.1
Lomsadze, A.2
Chernoff, Y.O.3
Borodovsky, M.4
-
65
-
-
0036352560
-
Purification and characterization of chitinases from the nematophagous fungi Verticillium chlamydosporium and V. suchlasporium
-
Tikhonov V.E., Lopez-Llorca L.V., Salinas J., Jansson H.-B. Purification and characterization of chitinases from the nematophagous fungi Verticillium chlamydosporium and V. suchlasporium. Fungal Genet. Biol. 2002, 35:67-78. http://dx.doi.org/10.1006/fgbi.2001.1312.
-
(2002)
Fungal Genet. Biol.
, vol.35
, pp. 67-78
-
-
Tikhonov, V.E.1
Lopez-Llorca, L.V.2
Salinas, J.3
Jansson, H.-B.4
-
66
-
-
65449136284
-
TopHat: discovering splice junctions with RNA-Seq
-
Trapnell C., Pachter L., Salzberg S.L. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 2009, 25:1105-1111. 10.1093/bioinformatics/btp120.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
67
-
-
0034788907
-
Surface attachment and pre-penetration stage development by plant pathogenic fungi
-
Tucker S.L., Talbot N.J. Surface attachment and pre-penetration stage development by plant pathogenic fungi. Annu. Rev. Phytopathol. 2001, 39:385-441. 10.1146/annurev.phyto.39.1.385.
-
(2001)
Annu. Rev. Phytopathol.
, vol.39
, pp. 385-441
-
-
Tucker, S.L.1
Talbot, N.J.2
-
68
-
-
80052614037
-
Fungal enzyme sets for plant polysaccharide degradation
-
Van Den Brink J., De Vries R.P. Fungal enzyme sets for plant polysaccharide degradation. Appl. Microbiol. Biotechnol. 2011, 91:1477-1492. 10.1007/s00253-011-3473-2.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.91
, pp. 1477-1492
-
-
Van Den Brink, J.1
De Vries, R.P.2
-
69
-
-
20544476855
-
Differential gene expression by Metarhizium anisopliae growing in root exudate and host (Manduca sexta) cuticle or hemolymph reveals mechanisms of physiological adaptation
-
Wang C., Hu G., St.Leger R.J. Differential gene expression by Metarhizium anisopliae growing in root exudate and host (Manduca sexta) cuticle or hemolymph reveals mechanisms of physiological adaptation. Fungal Genet. Biol. 2005, 42:704-718.
-
(2005)
Fungal Genet. Biol.
, vol.42
, pp. 704-718
-
-
Wang, C.1
Hu, G.2
St Leger, R.J.3
-
70
-
-
84860446000
-
The Pochonia chlamydosporia serine protease gene vcp1 is subject to regulation by carbon, nitrogen and pH: implications for nematode biocontrol
-
Ward E., Kerry B.R., Manzanilla-López R.H., Mutua G., Devonshire J., Kimenju J., Hirsch P.R. The Pochonia chlamydosporia serine protease gene vcp1 is subject to regulation by carbon, nitrogen and pH: implications for nematode biocontrol. PLoS ONE 2012, 7(4):e35657. 10.1371/journal.pone.0035657.
-
(2012)
PLoS ONE
, vol.7
, Issue.4
-
-
Ward, E.1
Kerry, B.R.2
Manzanilla-López, R.H.3
Mutua, G.4
Devonshire, J.5
Kimenju, J.6
Hirsch, P.R.7
-
71
-
-
0019210873
-
Nematode egg-shells
-
Wharton D. Nematode egg-shells. Parasitology 1980, 81:447-463.
-
(1980)
Parasitology
, vol.81
, pp. 447-463
-
-
Wharton, D.1
-
72
-
-
38549097050
-
PHI-base update: additions to the pathogen host interaction database
-
Winnenburg R., Urban M., Beacham A., Baldwin T.K., Holland S., Lindeberg M., Hansen H., Rawlings C., Hammond-Kosack K.E., Kohler J. PHI-base update: additions to the pathogen host interaction database. Nucleic Acids Res. 2008, 36:D572-D576. 10.1093/nar/gkm858.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Winnenburg, R.1
Urban, M.2
Beacham, A.3
Baldwin, T.K.4
Holland, S.5
Lindeberg, M.6
Hansen, H.7
Rawlings, C.8
Hammond-Kosack, K.E.9
Kohler, J.10
-
73
-
-
84863749771
-
Genomic perspectives on the evolution of fungal entomopathogenicity in Beauveria bassiana
-
Xiao G., Ying S.H., Zheng P., Wang Z.L., Zhang S., et al. Genomic perspectives on the evolution of fungal entomopathogenicity in Beauveria bassiana. Sci. Rep. 2012, 2:483. 10.1038/srep00483.
-
(2012)
Sci. Rep.
, vol.2
, pp. 483
-
-
Xiao, G.1
Ying, S.H.2
Zheng, P.3
Wang, Z.L.4
Zhang, S.5
-
74
-
-
84859898660
-
A beginner's guide to eukaryotic genome annotation
-
Yandell M., Ence D. A beginner's guide to eukaryotic genome annotation. Nat. Rev. Genet. 2012, 13:329-342. 10.1038/nrg3174.
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 329-342
-
-
Yandell, M.1
Ence, D.2
-
75
-
-
34247566667
-
Extracellular enzymes and the pathogenesis of nematophagous fungi
-
Yang J.K., Tian B.Y., Liang L.M., Zhang K.Q. Extracellular enzymes and the pathogenesis of nematophagous fungi. Appl. Microbiol. Biotechnol. 2007, 75:21-31. 10.1007/s00253-007-0881-4.
-
(2007)
Appl. Microbiol. Biotechnol.
, vol.75
, pp. 21-31
-
-
Yang, J.K.1
Tian, B.Y.2
Liang, L.M.3
Zhang, K.Q.4
-
76
-
-
80053445520
-
Genomic and proteomic analyses of the fungus Arthrobotrys oligospora provide insights into nematode-trap formation
-
Yang J., Wang L., Ji X., Feng Y., Li X., et al. Genomic and proteomic analyses of the fungus Arthrobotrys oligospora provide insights into nematode-trap formation. PLoS Pathog. 2011, 7(9):e1002179. 10.1371/journal.ppat.1002179.
-
(2011)
PLoS Pathog.
, vol.7
, Issue.9
-
-
Yang, J.1
Wang, L.2
Ji, X.3
Feng, Y.4
Li, X.5
-
77
-
-
0034822536
-
A revision of Verticillium section Prostrata V. The genus Pochonia, with notes on Rotiferophthora
-
Zare R., Gams W., Evans H.C. A revision of Verticillium section Prostrata V. The genus Pochonia, with notes on Rotiferophthora. Nova Hedwigia 2001, 73:51-86.
-
(2001)
Nova Hedwigia
, vol.73
, pp. 51-86
-
-
Zare, R.1
Gams, W.2
Evans, H.C.3
-
78
-
-
47849101631
-
Identification of genes preferentially expressed during microcycle conidiation of Metarhizium anisopliae using suppression subtractive hybridization
-
Zhang C., Xia Y. Identification of genes preferentially expressed during microcycle conidiation of Metarhizium anisopliae using suppression subtractive hybridization. FEMS Microbiol. Lett. 2008, 286:71-77. 10.1111/j.1574-6968.2008.01257.x.
-
(2008)
FEMS Microbiol. Lett.
, vol.286
, pp. 71-77
-
-
Zhang, C.1
Xia, Y.2
-
79
-
-
68649091187
-
Identification of genes differentially expressed in vivo by Metarhizium anisopliae in the hemolymph of Locusta migratoria using suppression-subtractive hybridization
-
Zhang C., Xia Y. Identification of genes differentially expressed in vivo by Metarhizium anisopliae in the hemolymph of Locusta migratoria using suppression-subtractive hybridization. Curr. Genet. 2009, 55:399-407. 10.1007/s00294-009-0254-x.
-
(2009)
Curr. Genet.
, vol.55
, pp. 399-407
-
-
Zhang, C.1
Xia, Y.2
-
80
-
-
81555232562
-
Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicine
-
Zheng P., Xia Y., Xiao G., Xiong C., Hu X., et al. Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicine. Genome Biol. 2011, 12:R116. 10.1186/gb-2011-12-11-r116.
-
(2011)
Genome Biol.
, vol.12
-
-
Zheng, P.1
Xia, Y.2
Xiao, G.3
Xiong, C.4
Hu, X.5
-
81
-
-
78650638642
-
Insights into radicicol biosynthesis via heterologous synthesis of intermediates and analogs
-
Zhou H., Qiao K., Gao Z., Vederas J.C., Tang Y. Insights into radicicol biosynthesis via heterologous synthesis of intermediates and analogs. J. Biol. Chem. 2010, 285:41412-41421. 10.1074/jbc.M110.183574.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 41412-41421
-
-
Zhou, H.1
Qiao, K.2
Gao, Z.3
Vederas, J.C.4
Tang, Y.5
-
82
-
-
80055091319
-
Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica
-
Zuccaro A., Lahrmann U., Güldener U., Langen G., Pfiffi S., et al. Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica. PLoS Pathog. 2011, 7(10):e1002290. 10.1371/journal.ppat.1002290.
-
(2011)
PLoS Pathog.
, vol.7
, Issue.10
-
-
Zuccaro, A.1
Lahrmann, U.2
Güldener, U.3
Langen, G.4
Pfiffi, S.5
|