Development of a DNA barcoding system for the Ixodida (Acari: Ixodida)

Mitochondrial DNA

Volumn 25, Issue 2, 2014, Pages 142-149

  Lv, Jizhou ^a   Wu, Shaoqiang ^a,b   Zhang, Yongning ^a   Zhang, Tianyi ^b   Feng, Chunyan ^a   Jia, Guangle ^a   Lin, Xiangmei ^a,b  

^a CHINESE ACADEMY OF INSPECTION AND QUARANTINE   (China)

^b CHINA AGRICULTURAL UNIVERSITY   (China)

Author keywords

16S; 18S; COI; DNA barcoding; Ticks

Indexed keywords

AMBLYOMMA; ARTICLE; DERMACENTOR; DNA BARCODING; DNA SEQUENCE; GENE SEQUENCE; GENETIC DISTANCE; GENETIC VARIABILITY; HAEMAPHYSALIS; HYALOMMA; MORPHOLOGICAL TRAIT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; RHIPICEPHALUS (BOOPHILUS) MICROPLUS; SEQUENCE ALIGNMENT; SPECIES IDENTIFICATION; TICK; ANIMAL; GENETICS; MOLECULAR GENETICS; SPECIES DIFFERENCE;

CYTOCHROME C OXIDASE; RNA 16S; RNA 18S;

ANIMALS; DNA BARCODING, TAXONOMIC; ELECTRON TRANSPORT COMPLEX IV; GENETIC VARIATION; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; RNA, RIBOSOMAL, 18S; SPECIES SPECIFICITY; TICKS;

EID: 84896088152     PISSN: 19401736     EISSN: 19401744     Source Type: Journal    
DOI: 10.3109/19401736.2013.792052     Document Type: Article

References (48)

1. Alcaide M, Rico C, Ruiz S, Soriguer R, Munoz J, Figuerola J. (2009). Disentangling vector-borne transmission networks: A universal DNA barcoding method to identify vertebrate hosts from arthropod blood-meals. Plos one 4:e7092.
2. Aliabadian M, Kaboli M, Nijman V, Vences M. (2009). Molecular identification of birds: Performance of distance-based DNA barcoding in three genes to delimit parapatric species. Plos one 4:e4119.
3. Anderson JM, Ammerman NC, Norris DE. (2004). Molecular differentiation of metastriate tick immatures. Vector borne zoonotic dis 4: 334-42.
4. Apanaskevich DA, Horak IG. (2008). The genus hyalomma koch, 1844: v. Re-evaluation of the taxonomic rank of taxa comprising the h.(euhyalomma) marginatum koch complex of species (acari: ixodidae) with redescription of all parasitic stages and notes on biology. Int J Acarology 34:13-42.
5. Apanaskevich DA, Schuster AL, Horak IG. (2008). The genus hyalomma: vii. Redescription of all parasitic stages of h. (euhyalomma) dromedarii and h. (e.) Schulzei (acari: ixodidae). J Med Entomol 45:817-31.
6. Barker SC, Murrell A. (2004). Systematics and evolution of ticks with a list of valid genus and species names. Parasitology 129:s15-36.
7. Black WCT, Klompen JS, Keirans JE. (1997). Phylogenetic relationships among tick subfamilies (ixodida: ixodidae: argasidae) based on the 18s nuclear rDNA gene. Mol Phylogenet Evol 7:129-44.
8. Black WCT, Piesman J. (1994). Phylogeny of hard-and soft-tick taxa (acari: ixodida) based on mitochondrial 16s rDNA sequences. Proc Natl Acad Sci 91:10034-8.
9. Caporale DA, Rich SM, Spielman A, Telford IIIrd SR, Kocher TD. (1995). Discriminating between ixodes ticks by means of mitochon-drial DNA sequences. Mol Phylogenet Evol 4:361-5.
10. Chen X, Yu Z, Guo L, Li L, Meng H, Wang D, Liu R, Liu J. (2012). Life cycle of haemaphysalis doenitzi (acari: ixodidae) under laboratory conditions and its phylogeny based on mitochondrial 16s rDNA. Exp Appl Acarol 56:143-50.
11. Chen Z, Yang X, Bu F, Liu J. (2010). Ticks (acari: ixodoidea: argasidae, ixodidae) of China. Exp Appl Acarol 51:393-404.
12. Chitimia L, Lin RQ, Cosoroaba I, Wu XY, Song HQ, Yuan ZG, Zhu XQ. (2010). Genetic characterization of ticks from southwestern romania by sequences of mitochondrial cox1 and nad5 genes. Exp Appl Acarol 52: 305-11.
13. Dobson SJ, Barker SC. (1999). Phylogeny of the hard ticks (ixodidae) inferred from 18s rrna indicates that the genus aponomma is paraphyletic. Mol Phylogenet Evol 11:288-95.
14. Feng Y, Li Q, Kong L, Zheng X. (2011a). DNA barcoding and phylogenetic analysis of pectinidae (mollusca: bivalvia) based on mitochondrial coi and 16s rrna genes. Mol Biol Rep 38:291-9.
15. Feng Y, Li Q, Kong L, Zheng X. (2011b). DNA barcoding and phylogenetic analysis of pectinidae (mollusca: bivalvia) based on mitochondrial coi and 16s rrna genes. Mol Biol Rep 38:291-9.
16. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit i from diverse metazoan invertebrates. Mol Mar biol Biotechnol 3:294-9.
17. Fouquet A, Gilles A, Vences M, Marty C, Blanc M, Gemmell NJ. (2007). Underestimation of species richness in neotropical frogs revealed by mtDNA analyses. Plos one 2:e1109.
18. Gariepy TD, Lindsay R, Ogden N, Gregory TR. (2012). Identifying the last supper: Utility of the DNA barcode library for bloodmeal identification in ticks. Mol Ecol Resour 12:646-52.
19. Guglielmone AA, Estrada-pena A, Mangold AJ, Barros-battesti DM, Labruna MB, Martins JR, Venzal JM, Arzua M, Keirans JE. (2003). Amblyomma aureolatum (pallas, 1772) and amblyomma ovale koch, 1844 (acari: ixodidae): Hosts, distribution and 16s rDNA sequences. Vet Parasitol 113:273-88.
20. Guglielmone AA, Venzal JM, Gonzlezacu AD, Nava S, Hinojosa A, Mangold AJ. (2006a). The phylogenetic position of ixodes stilesi neumann, 1911 (acari: ixodidae): Morphological and preliminary molecular evidences from 16s rDNA sequences. Systematic Parasitol 65:1-11.
21. Guglielmone AA, Venzal JM, Gonzalez-acu AD, Nava S, Hinojosa A, Mangold AJ. (2006b). The phylogenetic position of ixodes stilesi neumann, 1911 (acari: ixodidae): Morphological and preliminary molecular evidences from 16s rDNA sequences. Syst Parasitol 65: 1-11.
22. Gylfe A, Yabuki M, Drotz M, Bergstr MS, Fukunaga M, Olsen B. (2001). Phylogeographic relationships of ixodes uriae (acari: ixodidae) and their significance to transequatorial dispersal of borrelia garinii. Hereditas 134:195-99.
23. Hebert PD, Stoeckle MY, Zemlak TS, Francis CM. (2004). Identification of birds through DNA barcodes. Plos biol 2:e312.
24. Hebert PDN, Gregory TR. (2005). The promise of DNA barcoding for taxonomy. Systemat Biol 54:852-9.
25. Hoogstraal H, Kaiser MN. (1961). Ticks from European-Asiatic birds migrating through Egypt into Africa. Science 133:277-8.
26. Klompen H, Lekveishvili M, Black WCT. (2007). Phylogeny of parasitiform mites (acari) based on rrna. Mol Phylogenet Evol 43: 936-51.
27. Klompen J, Black IV WC, Keirans JE, Norris DE. (2000). Systematics and biogeography of hard ticks, a total evidence approach. Cladistics 16:79-102.
28. Lane RS, Burgdorfer W, Hayes SF, Barbour AG. (1985). Isolation of a spirochete from the soft tick, ornithodoros coriaceus: A possible agent of epizootic bovine abortion. Science 230:85-7.
29. Leo SS, Pybus MJ, Sperling FA. (2010). Deep mitochondrial DNA lineage divergences within alberta populations of dermacentor albipictus (acari: ixodidae) do not indicate distinct species. J Med Entomol 47:565-74.
30. Lucas C, Thangaradjou T, Papenbrock J. (2012). Development of a DNA barcoding system for seagrasses: Successful but not simple. Plos one 7: e29987.
31. Lynn DH, Strüder-kypke MC. (2006). Species of tetrahymena identical by small subunit rrna gene sequences are discriminated by mitochondrial cytochrome c oxidase i gene sequences. J Eukaryotic Microbiol 53: 385-7.
32. Mangold AJ, Bargues MD, Mas-coma S. (1998). Mitochondrial 16s rDNA sequences and phylogenetic relationships of species of rhipicephalus and other tick genera among metastriata (acari: ixodidae). Parasitol Res 84:478-84.
33. Mans BJ, de Klerk D, Pienaar R, Latif AA. (2011). Nuttalliella namaqua: A living fossil and closest relative to the ancestral tick lineage: Implications for the evolution of blood-feeding in ticks. Plos one 6: e23675.
34. Miller SE. (2007). DNA barcoding and the renaissance of taxonomy. Proc Natl Acad Sci 104:4775.
35. Norris DE, Klompen JSH, Black WC. (1999). Comparison of the mitochondrial 12s and 16s ribosomal DNA genes in resolving phylogenetic relationships among hard ticks (acari: ixodidae). Ann Entomol Soc Am 92:117-29.
36. Olsen B, Jaenson TG, Noppa L, Bunikis J, Bergstrom S. (1993). A lyme borreliosis cycle in seabirds and ixodes uriae ticks. Nature 362: 340-2.
37. Prakasan K, Ramani N. (2007). Two new species of ixodid ticks (acarina: ixodida) from kerala, india. Int J Zoo Res 3:169-77.
38. Qiu WG, Dykhuizen DE, Acosta MS, Luft BJ. (2002). Geographic uniformity of the lyme disease spirochete (borrelia burgdorferi) and its shared history with tick vector (ixodes scapularis) in the northeastern united states. Genetics 160:833-49.
39. Radolf JD, Caimano MJ, Stevenson B, Hu LT. (2012). Of ticks, mice and men: Understanding the dual-host lifestyle of lyme disease spiro-chaetes. Nat Rev Microbiol 10:87-99.
40. Schindel D, Miller SE. (2005). DNA barcoding a useful tool for taxonomists. Nature 435:17.
41. Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W. (2012). Nuclear ribosomal internal transcribed spacer (its) region as a universal DNA barcode marker for fungi. Proc Natl Acad Sci USA 109:6241-6.
42. Schwan TG, Hinnebusch BJ. (1998). Bloodstream-versus tick-associated variants of a relapsing fever bacterium. Science 280:1938-40.
43. Song S, Shao R, Atwell R, Barker S, Vankan D. (2011). Phylogenetic and phylogeographic relationships in ixodes holocyclus and ixodes cornuatus (acari: ixodidae) inferred from cox1 and its2 sequences. Int J Parasitol 41:871-80.
44. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. (2011). Mega5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-9.
45. Tavares ES, Gonalves P, Miyaki CY, Baker AJ. (2011). DNA barcode detects high genetic structure within neotropical bird species. Plos one 6:e28543.
46. Taylor RE, Seal BS, Stjeor S. (1982). Isolation of infectious bovine rhinotracheitis virus from the soft-shelled tick, ornithodoros coriaceus. Science 216:300-1.
47. Vences M, Thomas M, Bonett RM, Vieites DR. (2005). Deciphering amphibian diversity through DNA barcoding: Chances and challenges. Philos Trans Royal Soc B: Biol Sci 360:1859-68.
48. Vial L, Durand P, Arnathau C, Halos L, Diatta G, Trape JF, Renaud f. (2006). Molecular divergences of the ornithodoros sonrai soft tick species, a vector of human relapsing fever in West Africa. Microbes Infect 8:2605-11.