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Volumn 11, Issue 1, 2014, Pages 3-9

PRNA NoRC-associated RNA of rRNA operons

Author keywords

Gene silencing; Non coding RNA; Promoter associated RNA; Ribosomal RNA

Indexed keywords

NUCLEOLAR REMODELING COMPLEX; PROMOTER ASSOCIATED RNA; PROTEIN; RNA; UNCLASSIFIED DRUG;

EID: 84894446221     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.27448     Document Type: Article
Times cited : (17)

References (21)
  • 1
    • 33646147563 scopus 로고    scopus 로고
    • Intergenic transcripts regulate the epigenetic state of rRNA genes
    • ISSN 1097-2765. doi:10.1016/j.molcel.2006.03.028
    • Mayer C, Schmitz K, Li J, Grummt I, Santoro R. Intergenic transcripts regulate the epigenetic state of rRNA genes. Molecular Cell 22, 2006:351-361. ISSN 1097-2765. doi:10.1016/j.molcel.2006.03.028.
    • (2006) Molecular Cell , vol.22 , pp. 351-361
    • Mayer, C.1    Schmitz, K.2    Li, J.3    Grummt, I.4    Santoro, R.5
  • 2
    • 74149088040 scopus 로고    scopus 로고
    • Intergenic transcripts originating from a subclass of ribosomal DNA repeats silence ribosomal RNA genes in trans
    • PMID:20010804
    • Santoro R, Schmitz KM, Sandoval J, Grummt I. Intergenic transcripts originating from a subclass of ribosomal DNA repeats silence ribosomal RNA genes in trans. EMBO Rep 2010; 11:52-8; http://dx.doi.org/10.1038/embor.2009.254; PMID:20010804
    • (2010) EMBO Rep , vol.11 , pp. 52-58
    • Santoro, R.1    Schmitz, K.M.2    Sandoval, J.3    Grummt, I.4
  • 3
    • 48649106585 scopus 로고    scopus 로고
    • The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus
    • PMID:18600236
    • Mayer C, Neubert M, Grummt I. The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus. EMBO Rep 2008; 9:774-80; http://dx.doi.org/10.1038/embor.2008.109; PMID:18600236
    • (2008) EMBO Rep , vol.9 , pp. 774-780
    • Mayer, C.1    Neubert, M.2    Grummt, I.3
  • 4
    • 78049261451 scopus 로고    scopus 로고
    • Wisely chosen paths - Regulation of rRNA synthesis: Delivered on 30 June 2010 at the 35th FEBS Congress in Gothenburg, Sweden
    • PMID:20977666
    • Grummt I. Wisely chosen paths - regulation of rRNA synthesis: delivered on 30 June 2010 at the 35th FEBS Congress in Gothenburg, Sweden. FEBS J 2010; 277:4626-39; http://dx.doi.org/10.1111/j.1742-4658.2010.07892.x; PMID:20977666
    • (2010) FEBS J , vol.277 , pp. 4626-4639
    • Grummt, I.1
  • 5
    • 84875263916 scopus 로고    scopus 로고
    • Epigenetic control of RNA polymerase I transcription in mammalian cells
    • PMID:23063748
    • Grummt I, Längst G. Epigenetic control of RNA polymerase I transcription in mammalian cells. Biochim Biophys Acta 2013; 1829:393-404; http://dx.doi.org/10.1016/j.bbagrm.2012.10.004; PMID:23063748
    • (2013) Biochim Biophys Acta , vol.1829 , pp. 393-404
    • Grummt, I.1    Längst, G.2
  • 6
    • 68249094672 scopus 로고    scopus 로고
    • Reversible acetylation of the chromatin remodelling complex NoRC is required for non-coding RNA-dependent silencing
    • PMID:19578370
    • Zhou Y, Schmitz KM, Mayer C, Yuan X, Akhtar A, Grummt I. Reversible acetylation of the chromatin remodelling complex NoRC is required for non-coding RNA-dependent silencing. Nat Cell Biol 2009; 11:1010-6; http://dx.doi.org/10. 1038/ncb1914; PMID:19578370
    • (2009) Nat Cell Biol , vol.11 , pp. 1010-1016
    • Zhou, Y.1    Schmitz, K.M.2    Mayer, C.3    Yuan, X.4    Akhtar, A.5    Grummt, I.6
  • 7
    • 0022630031 scopus 로고
    • Two distinct promoter elements in the human rRNA gene identified by linker scanning mutagenesis
    • PMID:3785147
    • Haltiner MM, Smale ST, Tjian R. Two distinct promoter elements in the human rRNA gene identified by linker scanning mutagenesis. Mol Cell Biol 1986; 6:227-35; PMID:3785147
    • (1986) Mol Cell Biol , vol.6 , pp. 227-235
    • Haltiner, M.M.1    Smale, S.T.2    Tjian, R.3
  • 10
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • ISSN 0305-1048
    • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 1994:4673-4680. ISSN 0305-1048.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 11
    • 33747823564 scopus 로고    scopus 로고
    • MEME: Discovering and analyzing DNA and protein sequence motifs
    • ISSN 0305-1048. doi:10.1093/nar/gkl198
    • Bailey TL, Williams N, Misleh C, Li WW. MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Research 34, 2006:W369-W373. ISSN 0305-1048. doi:10.1093/nar/gkl198.
    • (2006) Nucleic Acids Research , vol.34
    • Bailey, T.L.1    Williams, N.2    Misleh, C.3    Li, W.W.4
  • 13
    • 33645702761 scopus 로고    scopus 로고
    • Fragrep: An efficient search tool for fragmented patterns in genomic sequences
    • PMID:16689703
    • Mosig A, Sameith K, Stadler P. Fragrep: an efficient search tool for fragmented patterns in genomic sequences. Genomics Proteomics Bioinformatics 2006; 4:56-60; http://dx.doi.org/10.1016/S1672-0229(06)60017-X; PMID:16689703
    • (2006) Genomics Proteomics Bioinformatics , vol.4 , pp. 56-60
    • Mosig, A.1    Sameith, K.2    Stadler, P.3
  • 14
  • 15
    • 0033080745 scopus 로고    scopus 로고
    • Complete suboptimal folding of RNA and the stability of secondary structures
    • ISSN 0006-3525. doi:10.1002/(SICI)1097-0282(199902) 49:2〈145:AID- BIP4〉3.0.CO;2-G
    • Wuchty S, Fontana W, Hofacker IL, Schuster P. Complete suboptimal folding of RNA and the stability of secondary structures. Biopolymers 49, 1999:145-165. ISSN 0006-3525. doi:10.1002/(SICI)1097-0282(199902) 49:2〈145:AID- BIP4〉3.0.CO;2-G.
    • (1999) Biopolymers , vol.49 , pp. 145-165
    • Wuchty, S.1    Fontana, W.2    Hofacker, I.L.3    Schuster, P.4
  • 17
    • 36549056971 scopus 로고    scopus 로고
    • RNA consensus structure prediction with RNAalifold
    • PMID:17993696
    • Hofacker IL. RNA consensus structure prediction with RNAalifold. Methods Mol Biol 2007; 395:527-44; PMID:17993696; http://dx.doi.org/10.1007/978-1-59745- 514-5-33
    • (2007) Methods Mol Biol , vol.395 , pp. 527-544
    • Hofacker, I.L.1
  • 18
    • 34247598415 scopus 로고    scopus 로고
    • Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering
    • PMID:17432929
    • Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R. Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering. PLoS Comput Biol 2007; 3:e65; http://dx.doi. org/10.1371/journal. pcbi.0030065; PMID:17432929
    • (2007) PLoS Comput Biol , vol.3
    • Will, S.1    Reiche, K.2    Hofacker, I.L.3    Stadler, P.F.4    Backofen, R.5
  • 19
    • 84871219030 scopus 로고    scopus 로고
    • Structure local multiple alignment of RNA
    • Proceedings of German Conference on Bioinformatics (GCB'2008), Gesellschaft für Informatik (GI), ISBN 987-3-88579-230-7. ISSN 1617-5468
    • Otto W, Will S, Backofen R. Structure local multiple alignment of RNA. In Proceedings of German Conference on Bioinformatics (GCB'2008), volume P-136 of Lecture Notes in Informatics (LNI). Gesellschaft für Informatik (GI), 2008. ISBN 987-3-88579-230-7. ISSN 1617-5468, 178-188.
    • (2008) Lecture Notes in Informatics (LNI) , vol.P-136 , pp. 178-188
    • Otto, W.1    Will, S.2    Backofen, R.3
  • 20
    • 65549111754 scopus 로고    scopus 로고
    • Infernal 1.0: Inference of RNA alignments
    • ISSN 1367-4803. doi:10.1093/bioinformatics/btp157
    • Nawrocki EP, Kolbe DL, Eddy SR. Infernal 1.0: inference of RNA alignments. Bioinformatics 25, 2009:1335-1337. ISSN 1367-4803. doi:10.1093/bioinformatics/btp157.
    • (2009) Bioinformatics , vol.25 , pp. 1335-1337
    • Nawrocki, E.P.1    Kolbe, D.L.2    Eddy, S.R.3
  • 21
    • 78650791283 scopus 로고    scopus 로고
    • R2R - Software to speed the depiction of aesthetic consensus RNA secondary structures
    • PMID:21205310
    • Weinberg Z, Breaker RR. R2R - software to speed the depiction of aesthetic consensus RNA secondary structures. BMC Bioinformatics 2011; 12:3; http://dx.doi.org/10.1186/1471-2105-12-3; PMID:21205310
    • (2011) BMC Bioinformatics , vol.12 , pp. 3
    • Weinberg, Z.1    Breaker, R.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.