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Volumn 133, Issue 3, 2014, Pages 265-279

On individual genome-wide association studies and their meta-analysis

Author keywords

[No Author keywords available]

Indexed keywords

GENE FREQUENCY; GENETIC LOCI; GENOME, HUMAN; GENOME-WIDE ASSOCIATION STUDY; HUMANS; MODELS, THEORETICAL; PHENOTYPE; SAMPLE SIZE;

EID: 84894427819     PISSN: 03406717     EISSN: 14321203     Source Type: Journal    
DOI: 10.1007/s00439-013-1366-4     Document Type: Article
Times cited : (23)

References (44)
  • 1
    • 84970846412 scopus 로고
    • Diagnostic tests 2: Predictive values
    • 1:STN:280:DyaK2czht12htQ%3D%3D 8038641 10.1136/bmj.309.6947.102
    • Altman DG, Bland JM (1994) Diagnostic tests 2: predictive values. BMJ 309:102
    • (1994) BMJ , vol.309 , pp. 102
    • Altman, D.G.1    Bland, J.M.2
  • 2
    • 34347335667 scopus 로고    scopus 로고
    • Guilt beyond a reasonable doubt
    • 1:CAS:528:DC%2BD2sXmvFKlsro%3D 17597768 10.1038/ng0707-813
    • Altshuler D, Daly M (2007) Guilt beyond a reasonable doubt. Nat Genet 39:813-815
    • (2007) Nat Genet , vol.39 , pp. 813-815
    • Altshuler, D.1    Daly, M.2
  • 3
    • 0029199341 scopus 로고
    • A method for quantifying differentiation between populations at multi-allelic loci and its implications for investigating identity and paternity
    • 1:STN:280:DyaK2MzjtFGhug%3D%3D 7607457 10.1007/BF01441146
    • Balding DJ, Nichols RA (1995) A method for quantifying differentiation between populations at multi-allelic loci and its implications for investigating identity and paternity. Genetica 96:3-12
    • (1995) Genetica , vol.96 , pp. 3-12
    • Balding, D.J.1    Nichols, R.A.2
  • 4
    • 84860771128 scopus 로고    scopus 로고
    • A subset-based approach improves power and interpretation for the combined analysis of genetic association studies of heterogeneous traits
    • 1:CAS:528:DC%2BC38Xms12ms7w%3D 3376551 22560090 10.1016/j.ajhg.2012.03. 015
    • Bhattacharjee S, Rajaraman P, Jacobs KB, Wheeler WA, Melin BS, Hartge P, Yeager M, Chung CC, Chanock SJ, Chatterjee N (2012) A subset-based approach improves power and interpretation for the combined analysis of genetic association studies of heterogeneous traits. Am J Hum Genet 90:821-835
    • (2012) Am J Hum Genet , vol.90 , pp. 821-835
    • Bhattacharjee, S.1    Rajaraman, P.2    Jacobs, K.B.3    Wheeler, W.A.4    Melin, B.S.5    Hartge, P.6    Yeager, M.7    Chung, C.C.8    Chanock, S.J.9    Chatterjee, N.10
  • 6
    • 41049093347 scopus 로고
    • The combination of estimates from different experiments
    • 10.2307/3001666
    • Cochran W (1954) The combination of estimates from different experiments. Biometrics 10:101-129
    • (1954) Biometrics , vol.10 , pp. 101-129
    • Cochran, W.1
  • 11
    • 84878020180 scopus 로고    scopus 로고
    • Meta-analysis methods for genome-wide association studies and beyond
    • 1:CAS:528:DC%2BC3sXnt1Sgtbc%3D 23657481 10.1038/nrg3472
    • Evangelou E, Ioannidis JP (2013) Meta-analysis methods for genome-wide association studies and beyond. Nat Rev Genet 14:379-389
    • (2013) Nat Rev Genet , vol.14 , pp. 379-389
    • Evangelou, E.1    Ioannidis, J.P.2
  • 13
    • 0037098215 scopus 로고    scopus 로고
    • Investigating causes of heterogeneity in systematic reviews
    • 1:STN:280:DC%2BD38zmtlSguw%3D%3D 12111916 10.1002/sim.1183
    • Glasziou PP, Sanders SL (2002) Investigating causes of heterogeneity in systematic reviews. Stat Med 21:1503-1511
    • (2002) Stat Med , vol.21 , pp. 1503-1511
    • Glasziou, P.P.1    Sanders, S.L.2
  • 15
    • 0037098199 scopus 로고    scopus 로고
    • Quantifying heterogeneity in a meta-analysis
    • 12111919 10.1002/sim.1186
    • Higgins JP, Thompson SG (2002) Quantifying heterogeneity in a meta-analysis. Stat Med 21:1539-1558
    • (2002) Stat Med , vol.21 , pp. 1539-1558
    • Higgins, J.P.1    Thompson, S.G.2
  • 16
    • 0041876133 scopus 로고    scopus 로고
    • Measuring inconsistency in meta-analyses
    • 12958120 10.1136/bmj.327.7414.557
    • Higgins JP, Thompson SG, Deeks JJ, Altman DG (2003) Measuring inconsistency in meta-analyses. BMJ 327:557-560
    • (2003) BMJ , vol.327 , pp. 557-560
    • Higgins, J.P.1    Thompson, S.G.2    Deeks, J.J.3    Altman, D.G.4
  • 17
    • 67249117049 scopus 로고    scopus 로고
    • Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
    • 1:CAS:528:DC%2BD1MXot1Cgur4%3D 19474294 10.1073/pnas.0903103106
    • Hindorff LA, Sethupathy P, Junkins HA, Ramos EM, Mehta JP, Collins FS, Manolio TA (2009) Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Proc Natl Acad Sci USA 106:9362-9367
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 9362-9367
    • Hindorff, L.A.1    Sethupathy, P.2    Junkins, H.A.3    Ramos, E.M.4    Mehta, J.P.5    Collins, F.S.6    Manolio, T.A.7
  • 18
    • 34447129720 scopus 로고    scopus 로고
    • Non-replication and inconsistency in the genome-wide association setting
    • 1:CAS:528:DC%2BD2sXnslWrur4%3D 17551261 10.1159/000103512
    • Ioannidis JP (2007) Non-replication and inconsistency in the genome-wide association setting. Hum Hered 64:203-213
    • (2007) Hum Hered , vol.64 , pp. 203-213
    • Ioannidis, J.P.1
  • 20
    • 41049087605 scopus 로고    scopus 로고
    • Heterogeneity in meta-analyses of genome-wide association investigations
    • 1950790 17786212 10.1371/journal.pone.0000841
    • Ioannidis JP, Patsopoulos NA, Evangelou E (2007) Heterogeneity in meta-analyses of genome-wide association investigations. PLoS One 2:e841
    • (2007) PLoS One , vol.2 , pp. 841
    • Ioannidis, J.P.1    Patsopoulos, N.A.2    Evangelou, E.3
  • 21
    • 65249164859 scopus 로고    scopus 로고
    • Validating, augmenting and refining genome-wide association signals
    • 1:CAS:528:DC%2BD1MXksF2rs7k%3D 19373277 10.1038/nrg2544
    • Ioannidis JP, Thomas G, Daly MJ (2009) Validating, augmenting and refining genome-wide association signals. Nat Rev Genet 10:318-329
    • (2009) Nat Rev Genet , vol.10 , pp. 318-329
    • Ioannidis, J.P.1    Thomas, G.2    Daly, M.J.3
  • 23
    • 38949210321 scopus 로고    scopus 로고
    • Methods for meta-analysis in genetic association studies: A review of their potential and pitfalls
    • 18026754 10.1007/s00439-007-0445-9
    • Kavvoura FK, Ioannidis JP (2008) Methods for meta-analysis in genetic association studies: a review of their potential and pitfalls. Hum Genet 123:1-14
    • (2008) Hum Genet , vol.123 , pp. 1-14
    • Kavvoura, F.K.1    Ioannidis, J.P.2
  • 25
    • 75649083856 scopus 로고    scopus 로고
    • Meta-analysis of genome-wide association studies: No efficiency gain in using individual participant data
    • 1:STN:280:DC%2BD1MfjtlCnsw%3D%3D 19847795
    • Lin DY, Zeng D (2010a) Meta-analysis of genome-wide association studies: no efficiency gain in using individual participant data. Genet Epidemiol 34:60-66
    • (2010) Genet Epidemiol , vol.34 , pp. 60-66
    • Lin, D.Y.1    Zeng, D.2
  • 26
    • 77952851091 scopus 로고    scopus 로고
    • On the relative efficiency of using summary statistics versus individual-level data in meta-analysis
    • 23049122 10.1093/biomet/asq006
    • Lin DY, Zeng D (2010b) On the relative efficiency of using summary statistics versus individual-level data in meta-analysis. Biometrika 97:321-332
    • (2010) Biometrika , vol.97 , pp. 321-332
    • Lin, D.Y.1    Zeng, D.2
  • 27
    • 58149189851 scopus 로고    scopus 로고
    • Is replication the gold standard for validating genome-wide association findings?
    • 2605260 19112512 10.1371/journal.pone.0004037
    • Liu YJ, Papasian CJ, Liu JF, Hamilton J, Deng HW (2008) Is replication the gold standard for validating genome-wide association findings? PLoS One 3:e4037
    • (2008) PLoS One , vol.3 , pp. 4037
    • Liu, Y.J.1    Papasian, C.J.2    Liu, J.F.3    Hamilton, J.4    Deng, H.W.5
  • 29
    • 82355170584 scopus 로고    scopus 로고
    • Transethnic meta-analysis of genome wide association studies
    • 3460225 22125221 10.1002/gepi.20630
    • Morris AP (2011) Transethnic meta-analysis of genome wide association studies. Genet Epidemiol 35:809-822
    • (2011) Genet Epidemiol , vol.35 , pp. 809-822
    • Morris, A.P.1
  • 30
    • 4143145303 scopus 로고    scopus 로고
    • Meta-analysis of genetic association studies
    • 1:CAS:528:DC%2BD2cXmsl2isb4%3D 15313553 10.1016/j.tig.2004.06.014
    • Munafo MR, Flint J (2004) Meta-analysis of genetic association studies. Trends Genet 20:439-444
    • (2004) Trends Genet , vol.20 , pp. 439-444
    • Munafo, M.R.1    Flint, J.2
  • 31
    • 77949463134 scopus 로고    scopus 로고
    • Susceptibility variants for rheumatoid arthritis in the TRAF1-C5 and 6q23 loci: A meta-analysis
    • 19401279 10.1136/ard.2009.109447
    • Patsopoulos NA, Ioannidis JP (2010) Susceptibility variants for rheumatoid arthritis in the TRAF1-C5 and 6q23 loci: a meta-analysis. Ann Rheum Dis 69:561-566
    • (2010) Ann Rheum Dis , vol.69 , pp. 561-566
    • Patsopoulos, N.A.1    Ioannidis, J.P.2
  • 32
    • 70350700502 scopus 로고    scopus 로고
    • Discovery properties of genome-wide association signals from cumulatively combined data sets
    • 19808636 10.1093/aje/kwp262
    • Pereira TV, Patsopoulos NA, Salanti G, Ioannidis JP (2009) Discovery properties of genome-wide association signals from cumulatively combined data sets. Am J Epidemiol 170:1197-1206
    • (2009) Am J Epidemiol , vol.170 , pp. 1197-1206
    • Pereira, T.V.1    Patsopoulos, N.A.2    Salanti, G.3    Ioannidis, J.P.4
  • 33
    • 79961030655 scopus 로고    scopus 로고
    • Critical interpretation of Cochran's Q test depends on power and prior assumptions about heterogeneity
    • 10.1002/jrsm.13
    • Pereira TV, Patsopoulos NA, Salanti G, Ioannidis JPA (2010) Critical interpretation of Cochran's Q test depends on power and prior assumptions about heterogeneity. Res Synth Methods 1:149-161
    • (2010) Res Synth Methods , vol.1 , pp. 149-161
    • Pereira, T.V.1    Patsopoulos, N.A.2    Salanti, G.3    Ioannidis, J.P.A.4
  • 34
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • 1:CAS:528:DC%2BD28XnsVCgsrg%3D 16862161 10.1038/ng1847
    • Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D (2006) Principal components analysis corrects for stratification in genome-wide association studies. Nat Genet 38:904-909
    • (2006) Nat Genet , vol.38 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5    Reich, D.6
  • 35
    • 84863887333 scopus 로고    scopus 로고
    • Genetics of osteoporosis from genome-wide association studies: Advances and challenges
    • 1:CAS:528:DC%2BC38XhtVektrrN 22805710 10.1038/nrg3228
    • Richards JB, Zheng HF, Spector TD (2012) Genetics of osteoporosis from genome-wide association studies: advances and challenges. Nat Rev Genet 13:576-588
    • (2012) Nat Rev Genet , vol.13 , pp. 576-588
    • Richards, J.B.1    Zheng, H.F.2    Spector, T.D.3
  • 36
    • 84878019007 scopus 로고    scopus 로고
    • MetaSeq: Privacy preserving meta-analysis of sequencing-based association studies
    • Singh AP, Zafer S, Pe'er I (2013) MetaSeq: privacy preserving meta-analysis of sequencing-based association studies. Pac Symp Biocomput 356-367
    • (2013) Pac Symp Biocomput , pp. 356-367
    • Singh, A.P.1    Zafer, S.2    Pe'Er, I.3
  • 40
    • 0037186429 scopus 로고    scopus 로고
    • Advanced methods in meta-analysis: Multivariate approach and meta-regression
    • 11836738 10.1002/sim.1040
    • van Houwelingen HC, Arends LR, Stijnen T (2002) Advanced methods in meta-analysis: multivariate approach and meta-regression. Stat Med 21:589-624
    • (2002) Stat Med , vol.21 , pp. 589-624
    • Van Houwelingen, H.C.1    Arends, L.R.2    Stijnen, T.3
  • 41
    • 13144265739 scopus 로고    scopus 로고
    • Genome-wide association studies: Theoretical and practical concerns
    • 1:CAS:528:DC%2BD2MXhtFyjsrw%3D 15716907 10.1038/nrg1522
    • Wang WY, Barratt BJ, Clayton DG, Todd JA (2005) Genome-wide association studies: theoretical and practical concerns. Nat Rev Genet 6:109-118
    • (2005) Nat Rev Genet , vol.6 , pp. 109-118
    • Wang, W.Y.1    Barratt, B.J.2    Clayton, D.G.3    Todd, J.A.4
  • 42
    • 20944448714 scopus 로고
    • Genetical structure of populations
    • 1:STN:280:DyaG3c%2FkvVyqsQ%3D%3D 15439261 10.1038/166247a0
    • Wright S (1950) Genetical structure of populations. Nature 166:247-249
    • (1950) Nature , vol.166 , pp. 247-249
    • Wright, S.1
  • 44
    • 65249183403 scopus 로고    scopus 로고
    • Meta-analysis in genome-wide association studies
    • 2695132 19207020 10.2217/14622416.10.2.191
    • Zeggini E, Ioannidis JP (2009) Meta-analysis in genome-wide association studies. Pharmacogenomics 10:191-201
    • (2009) Pharmacogenomics , vol.10 , pp. 191-201
    • Zeggini, E.1    Ioannidis, J.P.2


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