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Volumn 6, Issue 6, 2013, Pages

New insights into the evolution and structure of Colletotrichum plant-like subtilisins (CPLSs)

Author keywords

Colletotrichum; CPLS; Fungi; Horizontal gene transfer; Phytopathogen; Plants; Subtilisin

Indexed keywords


EID: 84894041018     PISSN: 19420889     EISSN: 19420889     Source Type: Journal    
DOI: 10.4161/cib.25727     Document Type: Article
Times cited : (3)

References (24)
  • 1
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • PMID:10830951
    • Ochman H, Lawrence JG, Groisman EA. Lateral gene transfer and the nature of bacterial innovation. Nature 2000; 405:299-304; PMID:10830951; http://dx.doi.org/10.1038/35012500.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 2
    • 0036209157 scopus 로고    scopus 로고
    • Horizontal gene transfer and bacterial diversity
    • PMID:11927775
    • Dutta C, Pan A. Horizontal gene transfer and bacterial diversity. J Biosci 2002; 27:27-33; PMID:11927775; http://dx.doi.org/10.1007/BF02703681.
    • (2002) J Biosci , vol.27 , pp. 27-33
    • Dutta, C.1    Pan, A.2
  • 3
    • 0037306453 scopus 로고    scopus 로고
    • Ancient horizontal gene transfer
    • PMID:12560809
    • Brown JR. Ancient horizontal gene transfer. Nat Rev Genet 2003; 4:121-32; PMID:12560809; http://dx.doi.org/10.1038/nrg1000.
    • (2003) Nat Rev Genet , vol.4 , pp. 121-132
    • Brown, J.R.1
  • 4
    • 0037458117 scopus 로고    scopus 로고
    • Gene transfer: gene swapping craze reaches eukaryotes
    • PMID:12546803
    • Gogarten JP. Gene transfer: gene swapping craze reaches eukaryotes. Curr Biol 2003; 13:R53-4; PMID:12546803; http://dx.doi.org/10.1016/S0960-9822(02)01426-4.
    • (2003) Curr Biol , vol.13
    • Gogarten, J.P.1
  • 5
    • 68349157380 scopus 로고    scopus 로고
    • Insertion of horizontally transferred genes within conserved syntenic regions of yeast genomes
    • PMID:19654869
    • Rolland T, Neuvéglise C, Sacerdot C, Dujon B. Insertion of horizontally transferred genes within conserved syntenic regions of yeast genomes. PLos ONE 2009; 4:e6515; PMID:19654869; http://dx.doi.org/10.1371/journal.pone.0006515.
    • (2009) PLos ONE , vol.4
    • Rolland, T.1    Neuvéglise, C.2    Sacerdot, C.3    Dujon, B.4
  • 6
    • 84857788331 scopus 로고    scopus 로고
    • Horizontal gene transfer in fungi
    • PMID:22112233
    • Fitzpatrick DA. Horizontal gene transfer in fungi. FEMS Microbiol Lett 2012; 329:1-8; PMID:22112233; http://dx.doi.org/10.1111/j.1574-6968.2011.02465.x.
    • (2012) FEMS Microbiol Lett , vol.329 , pp. 1-8
    • Fitzpatrick, D.A.1
  • 7
    • 84866897256 scopus 로고    scopus 로고
    • Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts
    • PMID:23028337
    • Gardiner DM, McDonald MC, Covarelli L, Solomon PS, Rusu AG, Marshall M, et al. Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts. PLoS Pathog 2012; 8:e1002952; PMID:23028337; http://dx.doi.org/10.1371/journal.ppat.1002952.
    • (2012) PLoS Pathog , vol.8
    • Gardiner, D.M.1    McDonald, M.C.2    Covarelli, L.3    Solomon, P.S.4    Rusu, A.G.5    Marshall, M.6
  • 8
    • 84860159446 scopus 로고    scopus 로고
    • Monitoring of horizontal gene transfer from agricultural microorganisms to soil bacteria and analysis of microbial community in soils
    • PMID:22534306
    • Kim SE, Moon JS, Choi WS, Lee SH, Kim SU. Monitoring of horizontal gene transfer from agricultural microorganisms to soil bacteria and analysis of microbial community in soils. J Microbiol Biotechnol 2012; 22:563-6; PMID:22534306; http://dx.doi. org/10.4014/jmb.1110.10066.
    • (2012) J Microbiol Biotechnol , vol.22 , pp. 563-566
    • Kim, S.E.1    Moon, J.S.2    Choi, W.S.3    Lee, S.H.4    Kim, S.U.5
  • 9
    • 84863806861 scopus 로고    scopus 로고
    • Recurrent horizontal transfer of bacterial toxin genes to eukaryotes
    • PMID:22411854
    • Moran Y, Fredman D, Szczesny P, Grynberg M, Technau U. Recurrent horizontal transfer of bacterial toxin genes to eukaryotes. Mol Biol Evol 2012; 29:2223-30; PMID:22411854; http://dx.doi. org/10.1093/molbev/mss089.
    • (2012) Mol Biol Evol , vol.29 , pp. 2223-2230
    • Moran, Y.1    Fredman, D.2    Szczesny, P.3    Grynberg, M.4    Technau, U.5
  • 10
    • 84871717175 scopus 로고    scopus 로고
    • Evidence for horizontal gene transfer of anaerobic carbon monoxide dehydrogenases
    • PMID:22529840
    • Techtmann SM, Lebedinsky AV, Colman AS, Sokolova TG, Woyke T, Goodwin L, et al. Evidence for horizontal gene transfer of anaerobic carbon monoxide dehydrogenases. Front Microbiol 2012; 3:132; PMID:22529840; http://dx.doi.org/10.3389/fmicb.2012.00132.
    • (2012) Front Microbiol , vol.3 , pp. 132
    • Techtmann, S.M.1    Lebedinsky, A.V.2    Colman, A.S.3    Sokolova, T.G.4    Woyke, T.5    Goodwin, L.6
  • 11
    • 69949175105 scopus 로고    scopus 로고
    • Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi
    • PMID:19584142
    • Richards TA, Soanes DM, Foster PG, Leonard G, Thornton CR, Talbot NJ. Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi. Plant Cell 2009; 21:1897-911; PMID:19584142; http://dx.doi. org/10.1105/tpc.109.065805.
    • (2009) Plant Cell , vol.21 , pp. 1897-1911
    • Richards, T.A.1    Soanes, D.M.2    Foster, P.G.3    Leonard, G.4    Thornton, C.R.5    Talbot, N.J.6
  • 12
    • 84859460610 scopus 로고    scopus 로고
    • Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing
    • PMID:22416119
    • de Jonge R, van Esse HP, Maruthachalam K, Bolton MD, Santhanam P, Saber MK, et al. Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing. Proc Natl Acad Sci USA 2012; 109:5110-5; PMID:22416119; http://dx.doi.org/10.1073/pnas.1119623109.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 5110-5115
    • de Jonge, R.1    van Esse, H.P.2    Maruthachalam, K.3    Bolton, M.D.4    Santhanam, P.5    Saber, M.K.6
  • 13
    • 84873248742 scopus 로고    scopus 로고
    • Comparative genomic and transcriptomic analyses reveal the hemibiotrophic stage shift of Colletotrichum fungi
    • PMID:23252678
    • Gan P, Ikeda K, Irieda H, Narusaka M, O'Connell RJ, Narusaka Y, et al. Comparative genomic and transcriptomic analyses reveal the hemibiotrophic stage shift of Colletotrichum fungi. New Phytol 2013; 197:1236-49; PMID:23252678; http://dx.doi. org/10.1111/nph.12085.
    • (2013) New Phytol , vol.197 , pp. 1236-1249
    • Gan, P.1    Ikeda, K.2    Irieda, H.3    Narusaka, M.4    O'Connell, R.J.5    Narusaka, Y.6
  • 14
    • 84875539053 scopus 로고    scopus 로고
    • Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles
    • PMID:23555871
    • Sun BF, Xiao JH, He S, Liu L, Murphy RW, Huang DW. Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles. PLos ONE 2013; 8:e60029; PMID:23555871; http://dx.doi.org/10.1371/journal.pone.0060029.
    • (2013) PLos ONE , vol.8
    • Sun, B.F.1    Xiao, J.H.2    He, S.3    Liu, L.4    Murphy, R.W.5    Huang, D.W.6
  • 15
    • 84875024755 scopus 로고    scopus 로고
    • Horizontal transfer of a subtilisin gene from plants into an ancestor of the plant pathogenic fungal genus Colletotrichum
    • PMID:23554975
    • Armijos Jaramillo VD, Vargas WA, Sukno SA, Thon MR. Horizontal transfer of a subtilisin gene from plants into an ancestor of the plant pathogenic fungal genus Colletotrichum. PLos ONE 2013; 8:e59078; PMID:23554975; http://dx.doi.org/10.1371/journal. pone.0059078.
    • (2013) PLos ONE , vol.8
    • Armijos Jaramillo, V.D.1    Vargas, W.A.2    Sukno, S.A.3    Thon, M.R.4
  • 16
    • 84867041792 scopus 로고    scopus 로고
    • Crystal structure of cucumisin, a subtilisin-like endoprotease from Cucumis melo L
    • PMID:22841692
    • Murayama K, Kato-Murayama M, Hosaka T, Sotokawauchi A, Yokoyama S, Arima K, et al. Crystal structure of cucumisin, a subtilisin-like endoprotease from Cucumis melo L. J Mol Biol 2012; 423:386-96; PMID:22841692; http://dx.doi.org/10.1016/j. jmb.2012.07.013.
    • (2012) J Mol Biol , vol.423 , pp. 386-396
    • Murayama, K.1    Kato-Murayama, M.2    Hosaka, T.3    Sotokawauchi, A.4    Yokoyama, S.5    Arima, K.6
  • 17
    • 63849246525 scopus 로고    scopus 로고
    • Protein structure prediction on the Web: a case study using the Phyre server
    • PMID:19247286
    • Kelley LA, Sternberg MJE. Protein structure prediction on the Web: a case study using the Phyre server. Nat Protoc 2009; 4:363-71; PMID:19247286; http://dx.doi.org/10.1038/nprot.2009.2.
    • (2009) Nat Protoc , vol.4 , pp. 363-371
    • Kelley, L.A.1    Sternberg, M.J.E.2
  • 18
    • 70350133848 scopus 로고    scopus 로고
    • Structural basis for Ca2+-independence and activation by homodimerization of tomato subtilase 3
    • PMID:19805099
    • Ottmann C, Rose R, Huttenlocher F, Cedzich A, Hauske P, Kaiser M, et al. Structural basis for Ca2+-independence and activation by homodimerization of tomato subtilase 3. Proc Natl Acad Sci USA 2009; 106:17223-8; PMID:19805099; http://dx.doi.org/10.1073/pnas.0907587106.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 17223-17228
    • Ottmann, C.1    Rose, R.2    Huttenlocher, F.3    Cedzich, A.4    Hauske, P.5    Kaiser, M.6
  • 19
    • 84876515907 scopus 로고    scopus 로고
    • STRING v9.1: proteinprotein interaction networks, with increased coverage and integration
    • PMID:23203871
    • Franceschini A, Szklarczyk D, Frankild S, Kuhn M, Simonovic M, Roth A, et al. STRING v9.1: proteinprotein interaction networks, with increased coverage and integration. Nucleic Acids Res 2013; 41:D808-15; PMID:23203871; http://dx.doi.org/10.1093/nar/gks1094.
    • (2013) Nucleic Acids Res , vol.41
    • Franceschini, A.1    Szklarczyk, D.2    Frankild, S.3    Kuhn, M.4    Simonovic, M.5    Roth, A.6
  • 20
    • 84863561552 scopus 로고    scopus 로고
    • Low relative humidity triggers RNA-directed de novo DNA methylation and suppression of genes controlling stomatal development
    • PMID:22442411
    • Tricker PJ, Gibbings JG, Rodríguez López CM, Hadley P, Wilkinson MJ. Low relative humidity triggers RNA-directed de novo DNA methylation and suppression of genes controlling stomatal development. J Exp Bot 2012; 63:3799-813; PMID:22442411; http://dx.doi.org/10.1093/jxb/ers076.
    • (2012) J Exp Bot , vol.63 , pp. 3799-3813
    • Tricker, P.J.1    Gibbings, J.G.2    Rodríguez López, C.M.3    Hadley, P.4    Wilkinson, M.J.5
  • 21
    • 80055034922 scopus 로고    scopus 로고
    • Molecular profiling of stomatal meristemoids reveals new component of asymmetric cell division and commonalities among stem cell populations in Arabidopsis
    • PMID:21963668
    • Pillitteri LJ, Peterson KM, Horst RJ, Torii KU. Molecular profiling of stomatal meristemoids reveals new component of asymmetric cell division and commonalities among stem cell populations in Arabidopsis. Plant Cell 2011; 23:3260-75; PMID:21963668; http://dx.doi.org/10.1105/tpc.111.088583.
    • (2011) Plant Cell , vol.23 , pp. 3260-3275
    • Pillitteri, L.J.1    Peterson, K.M.2    Horst, R.J.3    Torii, K.U.4
  • 22
    • 80052475187 scopus 로고    scopus 로고
    • The 14-3-3 isoforms chi and epsilon differentially bind client proteins from developing Arabidopsis seed
    • PMID:21766784
    • Swatek KN, Graham K, Agrawal GK, Thelen JJ. The 14-3-3 isoforms chi and epsilon differentially bind client proteins from developing Arabidopsis seed. J Proteome Res 2011; 10:4076-87; PMID:21766784; http://dx.doi.org/10.1021/pr200263m.
    • (2011) J Proteome Res , vol.10 , pp. 4076-4087
    • Swatek, K.N.1    Graham, K.2    Agrawal, G.K.3    Thelen, J.J.4
  • 23
    • 0033927031 scopus 로고    scopus 로고
    • Exploiting secondary growth in Arabidopsis. Construction of xylem and bark cDNA libraries and cloning of three xylem endopeptidases
    • PMID:10889267
    • Zhao C, Johnson BJ, Kositsup B, Beers EP. Exploiting secondary growth in Arabidopsis. Construction of xylem and bark cDNA libraries and cloning of three xylem endopeptidases. Plant Physiol 2000; 123:1185-96; PMID:10889267; http://dx.doi.org/10.1104/pp.123.3.1185.
    • (2000) Plant Physiol , vol.123 , pp. 1185-1196
    • Zhao, C.1    Johnson, B.J.2    Kositsup, B.3    Beers, E.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.