Potential of a white-rot fungus Pleurotus eryngii F032 for degradation and transformation of fluorene

Fungal Biology

Volumn 118, Issue 2, 2014, Pages 222-227

  Hadibarata, Tony ^a   Kristanti, Risky Ayu ^b  

^a UNIVERSITI TEKNOLOGI MALAYSIA   (Malaysia)

^b OSAKA UNIVERSITY   (Japan)

Author keywords

9 Fluorenone; Benzoic acid; Fluorene biotransformation; Ligninolytic enzymes; Metabolic pathway

Indexed keywords

BENZOIC ACID; ENZYME; FLUORENE; FLUORENE DERIVATIVE;

9-FLUORENONE; ARTICLE; BIOTRANSFORMATION; FLUORENE BIOTRANSFORMATION; LIGNINOLYTIC ENZYMES; MASS FRAGMENTOGRAPHY; METABOLISM; PLEUROTUS; ULTRAVIOLET SPECTROPHOTOMETRY;

9-FLUORENONE; BENZOIC ACID; FLUORENE BIOTRANSFORMATION; LIGNINOLYTIC ENZYMES; METABOLIC PATHWAY;

BIOTRANSFORMATION; ENZYMES; FLUORENES; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; METABOLIC NETWORKS AND PATHWAYS; PLEUROTUS; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 84893724644     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2013.11.013     Document Type: Article

References (37)

1. Adosinda M., Martins M., Ferreira I.C., Santos I.M., Queiroz M.J., Lima N. Biodegradation of bioaccessible textile azo dyes by Phanerochaete chrysosporium. Journal of Biotechnology 2001, 89:91-98.
2. Arun A., Eyini M. Comparative studies on lignin and polycyclic aromatic hydrocarbons degradation by basidiomycetes fungi. Bioresource Technology 2011, 102:8063-8070.
3. Bincova B., Sram R.J. The genotoxic effect of carcinogenic PAHs, their artificial and environmental mixture (OEM) of human diploid lung fibroblasts. Mutation Research 2004, 547:109-121.
4. Bumpus J.A. Biodegradation of polycyclic hydrocarbons by Phanerochaete chrysosporium. Applied and Environmental Microbiology 1989, 55:154-158.
5. Cerniglia C.E. Biodegradation of polycyclic aromatic hydrocarbons. Biodegradation 1992, 3:351-368.
6. Dean-Ross D., Cerniglia C.E. Degradation of pyrene by Mycobacterium flavescens. Applied Microbiology and Biotechnology 1996, 46:307-312.
7. Fetzner S. Oxygenases without requirement for cofactors or metal ions. Applied Microbiology and Biotechnology 2003, 60:243-257.
8. Fetzner S., Lingens F. Bacterial dehalogenases: biochemistry, genetics, and biotechnological applications. Microbiological Reviews 1994, 58:641-685.
9. Garcia-Junco M., De Olmedo E., Ortego-Calvo J.J. Bioavailability of solid and non-aqueous phase liquid-dissolved phenanthrene to the biosurfactant-producing bacterium Pseudomonas aeruginosa 19SJ. Environmental Microbiology 2001, 3:561-569.
10. Giardina P., Cannio R., Martirani L., Marzullo L., Palmieri G., Sannia G. Cloning and sequencing of a laccase gene from the lignin-degrading basidiomycete Pleurotus ostreatus. Applied and Environmental Microbiology 1995, 61:2408-2413.
11. Guerin W.F., Jones G.E. Mineralization of phenanthrene by a Mycobacterium sp. Applied and Environmental Microbiology 1998, 54:937-944.
12. Hadibarata T., Tachibana S., Itoh K. Biodegradation of phenanthrene by fungi screened from nature. Pakistan Journal of Biological Sciences 2007, 10:2535-2543.
13. Hadibarata T., Tachibana S., Itoh K. Biodegradation of n-eicosane by fungi screened from nature. Pakistan Journal of Biological Sciences 2007, 10:1804-1810.
14. Hadibarata T., Kristanti R.A. Identification of metabolites from benzo[a]pyrene oxidation by ligninolytic enzymes of Polyporus sp. S133. Journal of Environmental Management 2012, 111:115-119.
15. Hadibarata T., Yusoff A.R.M., Aris A., Kristanti R.A. Identification of naphthalene metabolism by white rot fungus Armillaria sp. F022. Journal of Environmental Science 2012, 24:728-732.
16. Hadibarata T., Teh Z.C., Rubiyatno, Zubir M.M.F.A., Khudhair A.B., Yusoff A.R.M., Salim M.R., Hidayat T. Identification of naphthalene metabolism by white rot fungus Pleurotus eryngii. Bioprocess and Biosystems Engineering 2013, 36:1455-1461.
17. Heitkamp M.A., Franklin W., Cerniglia C.E. Microbial metabolism of polycyclic aromatic hydrocarbons: isolation and characterization of a pyrene-degrading bacterium. Applied and Environmental Microbiology 1988, 54:2549-2555.
18. Hiner A.N.P., Hernandez-Ruiz J., Rodriguez-Lopez J.N., García-Canovas F., Brisset N.C., Smith A.T., Arnao M.B., Acosta M. Reactions of the class II peroxidases, lignin peroxidase and Arthromyces ramosus peroxidase, with hydrogen peroxide: catalase-like activity, compound III formation, and enzyme inactivation. The Journal of Biological Chemistry 2002, 277:26879-26885.
19. Hofrichter M. Review: lignin conversion by manganese peroxidase (MnP). Enzyme and Microbial Technology 2002, 30:454-466.
20. Kim J.S., Park J.W., Lee S.E., Kim J.E. Formation of bound residues of 8-hydroxybentazon by oxidoreductive catalysts in soil. Journal of Agricultural and Food Chemistry 2002, 50:3507-3511.
21. Kim S.J., Kweon O., Jones R.C., Freeman J.P., Edmondson R.D., Cerniglia C.E. Complete and integrated pyrene degradation pathway in Mycobacterium vanbaalenii PYR-1 based on systems biology. Journal of Bacteriology 2007, 189:464-472.
22. Koua D., Cerutti L., Falquet L., Sigrist C.J., Theiler G., Hulo N., Dunand C. PeroxiBase: a database with new tools for peroxidase family classification. Nucleic Acids Research 2009, 37:261-266.
23. Kristanti R.A., Hadibarata T., Toyama T., Tanaka Y., Mori K. Bioremediation of crude oil by white rot fungi Polyporus sp. S133. Journal of Microbiology and Biotechnology 2011, 21:995-1000.
24. Kweon O., Kim S.J., Jones R.C., Freeman J.P., Adjei M.D., Edmondson R.D., Cerniglia C.E. A polyomic approach to elucidate the fluoranthene degradative pathway in Mycobacterium vanbaalenii PYR-1. Journal of Bacteriology 2007, 189:4635-4647.
25. Lal R., Saxena D.M. Accumulation, metabolism and effects of organochlorine insecticides on microorganisms. Microbiological Reviews 1982, 46:95-127.
26. Lopez Z., Vila J., Minguillon C., Grifoll M. Metabolism of fluoranthene by Mycobacterium sp. strain AP1. Applied Microbiology and Biotechnology 2006, 70:747-756.
27. Mouhamadou B., Faure M., Sage L., Marcais J., Souard F., Geremia R.A. Potential of autochthonous fungal strains isolated from contaminated soils for degradation of polychlorinated biphenyls. Fungal Biology 2013, 117:268-274.
28. Poonthrigpun S., Pattaragulwanit K., Paengthai S., Kriangkripipat T., Juntongjin K., Thaniyavarn S., Petsom A., Pinphanichakarn P. Novel intermediates of acenaphthylene degradation by Rhizobium sp. strain CU-A1: evidence for naphthalene-1, 8-dicarboxylic acid metabolism. Applied and Environmental Microbiology 2006, 72:6034-6039.
29. Satsangee R., Ghosh P. Anaerobic degradation of phenol using an acclimated mixed culture. Applied Microbiology and Biotechnology 1990, 34:127-130.
30. Stanier R., Ingraham J., Wheelis M., Painter P. The Microbial World 1986, Prentice Hall, New Jersey. 5th edn.
31. Stingley R.L., Khan A.A., Cerniglia C.E. Molecular characterization of a phenanthrene degradation pathway in Mycobacterium vanbaalenii PYR-1. Biochemical and Biophysical Research Communications 2004, 322:133-146.
32. Story S.P., Parker S.H., Hayasaka S.S., Riley M.B., Kline E.L. Convergent and divergent points in catabolic pathways involved in utilization of fluoranthene, naphthalene, anthracene, and phenanthrene by Sphingomonas paucimobilis var. EPA505. Journal of Industrial Microbiology and Biotechnology 2001, 26:369-382.
33. + concentrations on sequential dye decolorization by Trametes versicolor. Enzyme and Microbial Technology 1999, 25:278-284.
34. Wang N., Hill G., Peng J. The role of glucose in developing enhanced biological phosphorous removal. Environmental Engineering and Policy 2002, 3:45-54.
35. Wasenberg D., Kyriakides I., Agathos S.N. White-rot fungi and their enzymes for the treatment of industrial dye effluents. Biotechnology Advance 2003, 22:161-187.
36. Williams P.P. Metabolism of synthetic organic pesticides by anaerobic microorganisms. Residue Reviews 1977, 66:63-135.
37. Zhong Y., Luan T., Lin L., Liu H., Tam N.F.Y. Production of metabolites in the biodegradation of phenanthrene, fluoranthene and pyrene by the mixed culture of Mycobacterium sp. and Sphingomonas sp. Bioresource Technology 2011, 102:2965-2972.