Tobacco smoking, NBS1 polymorphisms, and survival in lung and upper aerodigestive tract cancers with semi-Bayes adjustment for hazard ratio variation

Cancer Causes and Control

Volumn 25, Issue 1, 2014, Pages 11-23

  Yang, Tingting ^a,b   Chang, Po Yin ^b   Park, Sungshim Lani ^c   Bastani, Delara ^b   Chang, Shen Chih ^b   Morgenstern, Hal ^d   Tashkin, Donald P ^e   Mao, Jenny T ^f   Papp, Jeanette C ^e   Rao, Jian Yu ^e   Cozen, Wendy ^g   Mack, Thomas M ^g   Greenland, Sander ^b,h   Zhang, Zuo Feng ^b,e  

^a Zhejiang CDC   (China)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF HAWAII CANCER CENTER   (United States)

^d UNIVERSITY OF MICHIGAN   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f NEW MEXICO VA HEALTH CARE SYSTEM   (United States)

^g UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^h UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Bayesian methods; Lung cancer; NBS1; Survival; Tobacco; Upper aerodigestive tract (UADT) cancers

Indexed keywords

NIBRIN; CELL CYCLE PROTEIN; NBN PROTEIN, HUMAN; NUCLEAR PROTEIN;

ADULT; AGED; ARTICLE; BAYES THEOREM; CANCER MORTALITY; CANCER PROGNOSIS; CANCER SURVIVAL; CANCER SUSCEPTIBILITY; CLINICAL EVALUATION; CONTROLLED STUDY; DIGESTIVE SYSTEM CANCER; FEMALE; GENETIC ASSOCIATION; GENETIC VARIABILITY; HAZARD RATIO; HUMAN; LUNG CANCER; LUNG NON SMALL CELL CANCER; MAJOR CLINICAL STUDY; MALE; NBS1 GENE; POPULATION BASED CASE CONTROL STUDY; PRIORITY JOURNAL; PROSPECTIVE STUDY; SCORING SYSTEM; SEX DIFFERENCE; SINGLE NUCLEOTIDE POLYMORPHISM; SMOKING; SOCIAL SECURITY DEATH INDEX; SQUAMOUS CELL CARCINOMA; SURVIVAL RATE; UNITED STATES; UPPER AERODIGESTIVE TRACT CANCER; YOUNG ADULT; ADOLESCENT; CASE CONTROL STUDY; GENETICS; GENOTYPE; HEAD AND NECK TUMOR; LUNG TUMOR; MIDDLE AGED; MORTALITY; NON SMALL CELL LUNG CANCER;

ADOLESCENT; ADULT; AGED; BAYES THEOREM; CARCINOMA, NON-SMALL-CELL LUNG; CARCINOMA, SQUAMOUS CELL; CASE-CONTROL STUDIES; CELL CYCLE PROTEINS; FEMALE; GENOTYPE; HEAD AND NECK NEOPLASMS; HUMANS; LOS ANGELES; LUNG NEOPLASMS; MALE; MIDDLE AGED; NUCLEAR PROTEINS; POLYMORPHISM, SINGLE NUCLEOTIDE; SMOKING; YOUNG ADULT;

EID: 84893701515     PISSN: 09575243     EISSN: 15737225     Source Type: Journal    
DOI: 10.1007/s10552-013-0303-0     Document Type: Article

References (59)

1. Ferlay J, Shin HR, Bray F et al (2010) Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008. Int J Cancer 127:2893-2917
2. Siegel R, Naishadham D, Jemal A (2012) Cancer statistics, 2012. CA Cancer J Clin 62:10-29
3. Hoyert DL, Xu J (2012) National vital statistics reports. Deaths: preliminary data for 2011. Division of Vital Statistics. CDC/National Center for Health Statistics. vol 61, p 6
4. Gupta S, Kong W, Peng Y, Miao Q, Mackillop WJ (2009) Temporal trends in the incidence and survival of cancers of the upper aerodigestive tract in Ontario and the United States. Int J Cancer 125:2159-2165
5. Pulte D, Brenner H (2005) Changes in survival in head and neck cancers in the late 20th and early 21st century: a period analysis. Oncologist 15:994-1001
6. Sasco AJ, Secretan MB, Straif K (2004) Tobacco smoking and cancer: a brief review of recent epidemiological evidence. Lung Cancer 45(Suppl 2):S3-S9
7. Tammemagi CM, Neslund-Dudas C, Simoff M, Kvale P (2004) Smoking and lung cancer survival: the role of comorbidity and treatment. Chest 125:27-37
8. Nordquist LT, Simon GR, Cantor A, Alberts WM, Bepler G (2004) Improved survival in never-smokers vs current smokers with primary adenocarcinoma of the lung. Chest 126:347-351
9. Ryk C, Kumar R, Thirumaran RK, Hou SM (2006) Polymorphisms in the DNA repair genes XRCC1, APEX1, XRCC3 and NBS1, and the risk for lung cancer in never- and ever-smokers. Lung Cancer 54:285-292
10. Park SL, Bastani D, Goldstein BY et al (2010) Associations between NBS1 polymorphisms, haplotypes and smoking-related cancers. Carcinogenesis 31:1264-1271
11. Yang L, Li Y, Cheng M et al (2012) A functional polymorphism at microRNA-629-binding site in the 3′-untranslated region of NBS1 gene confers an increased risk of lung cancer in southern and eastern Chinese population. Carcinogenesis 33:338-347
12. Zheng J, Zhang C, Jiang L et al (2011) Functional NBS1 polymorphism is associated with occurrence and advanced disease status of nasopharyngeal carcinoma. Mol Carcinog 50:689-696
13. Yang MH, Chang SY, Chiou SH et al (2007) Overexpression of NBS1 induces epithelial-mesenchymal transition and co-expression of NBS1 and Snail predicts metastasis of head and neck cancer. Oncogene 26:1459-1467
14. Yang MH, Chiang WC, Chou TY et al (2006) Increased NBS1 expression is a marker of aggressive head and neck cancer and overexpression of NBS1 contributes to transformation. Clin Cancer Res 12:507-515
15. Ricceri F, Matullo G, Vineis P (2012) Is there evidence of involvement of DNA repair polymorphisms in human cancer? Mutat Res 736:117-121
16. Lu M, Lu J, Yang X et al (2009) Association between the NBS1 E185Q polymorphism and cancer risk: a meta-analysis. BMC Cancer 9:124
17. Cui Y, Morgenstern H, Greenland S et al (2006) Polymorphism of Xeroderma Pigmentosum group G and the risk of lung cancer and squamous cell carcinomas of the oropharynx, larynx and esophagus. Int J Cancer 118:714-720
18. Hashibe M, Morgenstern H, Cui Y et al (2006) Marijuana use and the risk of lung and upper aerodigestive tract cancers: results of a population-based case-control study. Cancer Epidemiol Biomarkers Prev 15:1829-1834
19. Sherry ST, Ward MH, Kholodov M et al (2001) dbSNP: the NCBI database of genetic variation. Nucleic Acids Res 29:308-311
20. De la Vega FM, Lazaruk KD, Rhodes MD, Wenz MH (2005) Assessment of two flexible and compatible SNP genotyping platforms: TaqMan SNP genotyping assays and the SNPlex genotyping system. Mutat Res 573:111-135
21. Greene FL, Page DL, Fleming ID et al (eds) (2002) AJCC cancer staging manual, 6th edn. Springer, New York
22. Vaughan TL, Davis S, Kristal A, Thomas DB (1995) Obesity, alcohol, and tobacco as risk factors for cancers of the esophagus and gastric cardia: adenocarcinoma versus squamous cell carcinoma. Cancer Epidemiol Biomark Prev 4:85-92
23. Ye W, Held M, Lagergren J et al (2004) Helicobacter pylori infection and gastric atrophy: risk of adenocarcinoma and squamous-cell carcinoma of the esophagus and adenocarcinoma of the gastric cardia. J Natl Cancer Inst 96:388-396
24. Lagergren J, Bergstrom R, Lindgren A, Nyren O (1999) Symptomatic gastroesophageal reflux as a risk factor for esophageal adenocarcinoma. N Engl J Med 340:825-831
25. Wakefield J (2007) A Bayesian measure of the probability of false discovery in genetic epidemiology studies. Am J Hum Genet 81:208-227
26. Greenland S (2007) Bayesian perspectives for epidemiological research. II. Regression analysis. Int J Epidemiol 36:195-202
27. Greenland S, Poole C (1994) Empirical-Bayes and semi-Bayes approaches to occupational and environmental hazard surveillance. Arch Environ Health 49:9-16
28. Greenland S (1992) A semi-Bayes approach to the analysis of correlated multiple associations, with an application to an occupational cancer-mortality study. Stat Med 11:219-230
29. Wacholder S, Chanock S, Garcia-Closas M, El Ghormli L, Rothman N (2004) Assessing the probability that a positive report is false: an approach for molecular epidemiology studies. J Natl Cancer Inst 96:434-442
30. Oh SS, Chang SC, Cai L et al (2010) Single nucleotide polymorphisms of 8 inflammation-related genes and their associations with smoking-related cancers. Int J Cancer 127:2169-2182
31. Liu Y, Shete S, Etzel CJ et al (2010) Polymorphisms of LIG4, BTBD2, HMGA2, and RTEL1 genes involved in the double-strand break repair pathway predict glioblastoma survival. J Clin Oncol 28:2467-2474
32. Landvik NE, Hart K, Skaug V et al (2009) A specific interleukin-1B haplotype correlates with high levels of IL1B mRNA in the lung and increased risk of non-small cell lung cancer. Carcinogenesis 30:1186-1192
33. Greenland S (2008) Introduction to regression models. In: Rothman KJ, Greenland S, Lash TL (eds) Modern epidemiology, 3rd edn. Lippincott-Williams- Wilkins, Philadelphia, p 405
34. Greenland S, Christensen R (2001) Data augmentation priors for Bayesian and semi-Bayes analyses of conditional-logistic and proportional-hazards regression. Stat Med 20:2421-2428
35. Arnson Y, Shoenfeld Y, Amital H (2010) Effects of tobacco smoke on immunity, inflammation and autoimmunity. J Autoimmun 34:J258-J265
36. Feldman C, Anderson R (2013) Cigarette smoking and mechanisms of susceptibility to infections of the respiratory tract and other organ systems. J Infect 67:169-184
37. Nichols L, Saunders R, Knollmann FD (2012) Causes of death of patients with lung cancer. Arch Pathol Lab Med 136:1552-1557
38. Johnston-Early A, Cohen MH, Minna JD et al (1980) Smoking abstinence and small cell lung cancer survival. An association. JAMA 244:2175-2179
39. Browman GP, Wong G, Hodson I et al (1993) Influence of cigarette smoking on the efficacy of radiation therapy in head and neck cancer. N Engl J Med 328:159-163
40. Browman GP, Mohide EA, Willan A et al (2002) Association between smoking during radiotherapy and prognosis in head and neck cancer: a follow-up study. Head Neck 24:1031-1037
41. Pytynia KB, Grant JR, Etzel CJ et al (2004) Matched-pair analysis of survival of never smokers and ever smokers with squamous cell carcinoma of the head and neck. J Clin Oncol 22:3981-3988
42. Oliveira LR, Ribeiro-Silva A, Costa JP et al (2008) Prognostic factors and survival analysis in a sample of oral squamous cell carcinoma patients. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 106:685-695
43. Kobayashi J, Antoccia A, Tauchi H, Matsuura S, Komatsu K (2004) NBS1 and its functional role in the DNA damage response. DNA Repair (Amst) 3:855-861
44. Williams RS, Williams JS, Tainer JA (2007) Mre11-Rad50-Nbs1 is a keystone complex connecting DNA repair machinery, double-strand break signaling, and the chromatin template. Biochem Cell Biol 85:509-520
45. Lee JH, Paull TT (2007) Activation and regulation of ATM kinase activity in response to DNA double-strand breaks. Oncogene 26:7741-7748
46. Lavin MF (2007) ATM and the Mre11 complex combine to recognize and signal DNA double-strand breaks. Oncogene 26:7749-7758
47. Hebbring SJ, Fredriksson H, White KA et al (2006) Role of the Nijmegen breakage syndrome 1 gene in familial and sporadic prostate cancer. Cancer Epidemiol Biomarkers Prev 15:935-938
48. Millikan RC, Player JS, Decotret AR, Tse CK, Keku T (2005) Polymorphisms in DNA repair genes, medical exposure to ionizing radiation, and breast cancer risk. Cancer Epidemiol Biomarkers Prev 14:2326-2334
49. Kuschel B, Auranen A, McBride S et al (2002) Variants in DNA double-strand break repair genes and breast cancer susceptibility. Hum Mol Genet 11:1399-1407
50. Hsu HM, Wang HC, Chen ST et al (2007) Breast cancer risk is associated with the genes encoding the DNA double-strand break repair Mre11/Rad50/Nbs1 complex. Cancer Epidemiol Biomarkers Prev 16:2024-2032
51. Sanyal S, Festa F, Sakano S et al (2004) Polymorphisms in DNA repair and metabolic genes in bladder cancer. Carcinogenesis 25:729-734
52. Figueroa JD, Malats N, Rothman N et al (2007) Evaluation of genetic variation in the double-strand break repair pathway and bladder cancer risk. Carcinogenesis 28:1788-1793
53. Jiang L, Liang J, Jiang M et al (2011) Functional polymorphisms in the NBS1 gene and acute lymphoblastic leukemia susceptibility in a Chinese population. Eur J Haematol 86:199-205
54. Huang MD, Chen XF, Xu G et al (2012) Genetic variation in the NBS1 gene is associated with hepatic cancer risk in a Chinese population. DNA Cell Biol 31:678-682
55. Xu JL, Hu LM, Huang MD et al (2012) Genetic variants of NBS1 predict clinical outcome of platinum-based chemotherapy in advanced non-small cell lung cancer in Chinese. Asian Pac J Cancer Prev 13:851-856
56. Hsu DS, Chang SY, Liu CJ et al (2010) Identification of increased NBS1 expression as a prognostic marker of squamous cell carcinoma of the oral cavity. Cancer Sci 101:1029-1037
57. Greenland S (2006) Bayesian perspectives for epidemiological research: I. Foundations and basic methods. Int J Epidemiol 35:765-775
58. Tsao AS, Liu D, Lee JJ, Spitz M, Hong WK (2006) Smoking affects treatment outcome in patients with advanced nonsmall cell lung cancer. Cancer 106:2428-2436
59. Sun Z, Aubry MC, Deschamps C et al (2006) Histologic grade is an independent prognostic factor for survival in non-small cell lung cancer: an analysis of 5018 hospital- and 712 population-based cases. J Thorac Cardiovasc Surg 131:1014-1020