-
2
-
-
77954599557
-
Deep desulfurization of diesel fuel using ionic liquids: Current status and future challenges
-
doi:10.1039/c002113j
-
Kulkarni PS, Afonsoa CAM (2010) Deep desulfurization of diesel fuel using ionic liquids: current status and future challenges. Green Chem 12: 1139-1149. doi:10.1039/c002113j.
-
(2010)
Green Chem
, vol.12
, pp. 1139-1149
-
-
Kulkarni, P.S.1
Afonsoa, C.A.M.2
-
3
-
-
79955629307
-
Desulfurization by oxidation combined with extraction using acidic room-temperature ionic liquids
-
doi:10.1039/c0gc00745e
-
Chi Y, Li C, Jiao Q, Liu Q, Yan P et al. (2011) Desulfurization by oxidation combined with extraction using acidic room-temperature ionic liquids. Green Chem 13: 1224-1229. doi:10.1039/c0gc00745e.
-
(2011)
Green Chem
, vol.13
, pp. 1224-1229
-
-
Chi, Y.1
Li, C.2
Jiao, Q.3
Liu, Q.4
Yan, P.5
-
4
-
-
84856211329
-
Oxidative desulfurization of benzothiophene and thiophene with WOx/ZrO2 catalysts: Effect of calcination temperature of catalysts
-
doi:10.1016/j.jhazmat.2011.12.059. PubMed: 22245512
-
Hasan Z, Jeon J, Jhung SH (2012) Oxidative desulfurization of benzothiophene and thiophene with WOx/ZrO2 catalysts: effect of calcination temperature of catalysts. J Hazard Mater 205-206: 216-221. doi:10.1016/j. jhazmat.2011.12.059. PubMed: 22245512.
-
(2012)
J Hazard Mater
, vol.205-206
, pp. 216-221
-
-
Hasan, Z.1
Jeon, J.2
Jhung, S.H.3
-
5
-
-
84899662627
-
Recent developments in biodesulfurization of fossil fuels
-
PubMed: 19475378
-
Xu P, Feng J, Yu B, Li F, Ma C (2009) Recent developments in biodesulfurization of fossil fuels. Adv Biochem Eng Biotechnol 113: 255-274. PubMed: 19475378.
-
(2009)
Adv Biochem Eng Biotechnol
, vol.113
, pp. 255-274
-
-
Xu, P.1
Feng, J.2
Yu, B.3
Li, F.4
Ma, C.5
-
6
-
-
51149106751
-
Biocatalytic desulfurization (BDS) of petrodiesel fuels
-
doi:10.1099/mic.0.2008/017608-0. PubMed: 18667551
-
Mohebali G, Ball AS (2008) Biocatalytic desulfurization (BDS) of petrodiesel fuels. Microbiology 154: 2169-2183. doi:10.1099/mic.0.2008/017608-0. PubMed: 18667551.
-
(2008)
Microbiology
, vol.154
, pp. 2169-2183
-
-
Mohebali, G.1
Ball, A.S.2
-
7
-
-
0015822179
-
Identification of microbial products from dibenzothiophene and its proposed oxidation pathway
-
doi:10.1271/bbb1961.37.45
-
Kodama K, Umehara K, Shimizu K, Nakatani S, Minoda Y et al. (1973) Identification of microbial products from dibenzothiophene and its proposed oxidation pathway. Agric Biol Chem 37: 45-50. doi:10.1271/bbb1961.37.45.
-
(1973)
Agric Biol Chem
, vol.37
, pp. 45-50
-
-
Kodama, K.1
Umehara, K.2
Shimizu, K.3
Nakatani, S.4
Minoda, Y.5
-
8
-
-
0027326333
-
Identification and cloning of genes involved in specific desulfurization of dibenzothiophene by Rhodococcus sp. Strain IGTS8
-
PubMed: 16349035
-
Denome SA, Olson ES, Young KD (1993) Identification and cloning of genes involved in specific desulfurization of dibenzothiophene by Rhodococcus sp. strain IGTS8. Appl Environ Microbiol 59: 2837-2843. PubMed: 16349035.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 2837-2843
-
-
Denome, S.A.1
Olson, E.S.2
Young, K.D.3
-
9
-
-
0027996697
-
Characterization of the desulfurization genes from Rhodococcus sp. Strain IGTS8
-
PubMed: 7961424
-
Denome SA, Oldfield C, Nash LJ, Young KD (1994) Characterization of the desulfurization genes from Rhodococcus sp. strain IGTS8. J Bacteriol 176: 6707-6716. PubMed: 7961424.
-
(1994)
J Bacteriol
, vol.176
, pp. 6707-6716
-
-
Denome, S.A.1
Oldfield, C.2
Nash, L.J.3
Young, K.D.4
-
10
-
-
0035067250
-
DNA shuffling method for generating highly recombined genes and evolved enzymes
-
doi:10.1038/86744. PubMed: 11283594
-
Coco WM, Levinson WE, Crist MJ, Hektor HJ, Darzins A et al. (2001) DNA shuffling method for generating highly recombined genes and evolved enzymes. Nat Biotechnol 19: 354-359. doi:10.1038/86744. PubMed: 11283594.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 354-359
-
-
Coco, W.M.1
Levinson, W.E.2
Crist, M.J.3
Hektor, H.J.4
Darzins, A.5
-
11
-
-
0029829688
-
Molecular mechanism of biocatalytic desulfurization of fossil fuels
-
doi:10.1038/nbt1296-1705. PubMed: 9634856
-
Gray KA, Pogrebinsky OS, Mrachko GT, Xi L, Monticello DJ et al. (1996) Molecular mechanism of biocatalytic desulfurization of fossil fuels. Nat Biotechnol 14: 1705-1709. doi:10.1038/nbt1296-1705. PubMed: 9634856.
-
(1996)
Nat Biotechnol
, vol.14
, pp. 1705-1709
-
-
Gray, K.A.1
Pogrebinsky, O.S.2
Mrachko, G.T.3
Xi, L.4
Monticello, D.J.5
-
12
-
-
33845947216
-
Crystal structure and desulfurization mechanism of 2′- hydroxybiphenyl-2-sulfinic acid desulfinase
-
doi:10.1074/jbc.M602974200. PubMed: 16891315
-
Lee WC, Ohshiro T, Matsubara T, Izumi Y, Tanokura M (2006) Crystal structure and desulfurization mechanism of 2′-hydroxybiphenyl-2-sulfinic acid desulfinase. J Biol Chem 281: 32534-32539. doi:10.1074/jbc.M602974200. PubMed: 16891315.
-
(2006)
J Biol Chem
, vol.281
, pp. 32534-32539
-
-
Lee, W.C.1
Ohshiro, T.2
Matsubara, T.3
Izumi, Y.4
Tanokura, M.5
-
13
-
-
10144247252
-
Gene overexpression, purification, and identification of a desulfurization enzyme from Rhodococcus sp. Strain IGTS8 as a sulfide/sulfoxide monooxygenase
-
PubMed: 8824615
-
Lei B, Tu SC (1996) Gene overexpression, purification, and identification of a desulfurization enzyme from Rhodococcus sp. strain IGTS8 as a sulfide/sulfoxide monooxygenase. J Bacteriol 178: 5699-5705. PubMed: 8824615.
-
(1996)
J Bacteriol
, vol.178
, pp. 5699-5705
-
-
Lei, B.1
Tu, S.C.2
-
14
-
-
0035289693
-
Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1
-
doi:10.1128/AEM.67.3.1179-1184. PubMed: 11229908
-
Matsubara T, Ohshiro T, Nishina Y, Izumi Y (2001) Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1. Appl Environ Microbiol 67: 1179-1184. doi:10.1128/AEM.67.3.1179-1184. PubMed: 11229908.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 1179-1184
-
-
Matsubara, T.1
Ohshiro, T.2
Nishina, Y.3
Izumi, Y.4
-
15
-
-
70450141254
-
Biodesulfurization of dibenzothiophene by a newly isolated Rhodococcus erythropolis strain
-
doi:10.1016/j.biortech.2009.08.058. PubMed: 19819129
-
Davoodi-Dehaghani F, Vosoughi M, Ziaee AA (2010) Biodesulfurization of dibenzothiophene by a newly isolated Rhodococcus erythropolis strain. Bioresour Technol 101: 1102-1105. doi:10.1016/j.biortech.2009.08.058. PubMed: 19819129.
-
(2010)
Bioresour Technol
, vol.101
, pp. 1102-1105
-
-
Davoodi-Dehaghani, F.1
Vosoughi, M.2
Ziaee, A.A.3
-
16
-
-
57449117454
-
Methoxylation pathway in biodesulfurization of model organosulfur compounds with Mycobacterium sp
-
doi:10.1016/j.biortech.2008.10.010. PubMed: 19028092
-
Chen H, Cai YB, Zhang WJ, Li W (2009) Methoxylation pathway in biodesulfurization of model organosulfur compounds with Mycobacterium sp. Bioresour Technol 100: 2085-2087. doi:10.1016/j.biortech.2008.10.010. PubMed: 19028092.
-
(2009)
Bioresour Technol
, vol.100
, pp. 2085-2087
-
-
Chen, H.1
Cai, Y.B.2
Zhang, W.J.3
Li, W.4
-
17
-
-
74749088240
-
Biodesulfurization of gas oil using inorganic supports biomodified with metabolically active cells immobilized by adsorption
-
doi:10.1016/j.biortech.2009.11.086. PubMed: 20034786
-
Dinamarca MA, Ibacache-Quiroga C, Baeza P, Galvez S, Villarroel M et al. (2010) Biodesulfurization of gas oil using inorganic supports biomodified with metabolically active cells immobilized by adsorption. Bioresour Technol 101: 2375-2378. doi:10.1016/j.biortech.2009.11.086. PubMed: 20034786.
-
(2010)
Bioresour Technol
, vol.101
, pp. 2375-2378
-
-
Dinamarca, M.A.1
Ibacache-Quiroga, C.2
Baeza, P.3
Galvez, S.4
Villarroel, M.5
-
18
-
-
67650269388
-
In situ magnetic separation and immobilization of dibenzothiophene- desulfurizing bacteria
-
doi:10.1016/j.biortech.2009.05.064. PubMed: 19541480
-
Li YG, Gao HS, Li WL, Xing JM, Liu HZ (2009) In situ magnetic separation and immobilization of dibenzothiophene-desulfurizing bacteria. Bioresour Technol 100: 5092-5096. doi:10.1016/j.biortech.2009.05.064. PubMed: 19541480.
-
(2009)
Bioresour Technol
, vol.100
, pp. 5092-5096
-
-
Li, Y.G.1
Gao, H.S.2
Li, W.L.3
Xing, J.M.4
Liu, H.Z.5
-
19
-
-
0002437293
-
Operon structure and functional analysis of the genes encoding thermophilic desulfurizing enzymes of Paenibacillus sp. A11-2
-
Ishii Y, Konishi J, Okada H, Hirasawa K, Onaka T, et al. (2000) Operon structure and functional analysis of the genes encoding thermophilic desulfurizing enzymes of Paenibacillus sp. A11-2. Biochem Bioph Res Co 270: 81-88
-
(2000)
Biochem Bioph Res Co
, vol.270
, pp. 81-88
-
-
Ishii, Y.1
Konishi, J.2
Okada, H.3
Hirasawa, K.4
Onaka, T.5
-
20
-
-
0034659642
-
Demonstration of the carbon-sulfur bond targeted desulfurization of benzothiophene by thermophilic Paenibacillus sp. Strain A11-2 capable of desulfurizing dibenzothiophene
-
doi:10.1111/j.1574-6968.2000.tb09152.x. PubMed: 10856649
-
Konishi J, Onaka T, Ishii Y, Suzuki M (2000) Demonstration of the carbon-sulfur bond targeted desulfurization of benzothiophene by thermophilic Paenibacillus sp. strain A11-2 capable of desulfurizing dibenzothiophene. FEMS Microbiol Lett 187: 151-154. doi:10.1111/j.1574-6968.2000.tb09152.x. PubMed: 10856649.
-
(2000)
FEMS Microbiol Lett
, vol.187
, pp. 151-154
-
-
Konishi, J.1
Onaka, T.2
Ishii, Y.3
Suzuki, M.4
-
21
-
-
12244270371
-
Microbial desulfurization of gasoline in a Mycobacterium goodii X7B immobilized-cell system
-
doi:10.1128/AEM.71.1.276-281.2005. PubMed: 15640198
-
Li F, Xu P, Feng J, Meng L, Zheng Y et al. (2005) Microbial desulfurization of gasoline in a Mycobacterium goodii X7B immobilized-cell system. Appl Environ Microbiol 71: 276-281. doi:10.1128/AEM.71.1.276-281.2005. PubMed: 15640198.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 276-281
-
-
Li, F.1
Xu, P.2
Feng, J.3
Meng, L.4
Zheng, Y.5
-
22
-
-
51349091821
-
Biodesulfurization of dibenzothiophene by recombinant Gordonia alkanivorans RIPI90A
-
doi:10.1016/j.biortech.2008.06.011. PubMed: 18653330
-
Shavandi M, Sadeghizadeh M, Zomorodipour A, Khajeh K (2009) Biodesulfurization of dibenzothiophene by recombinant Gordonia alkanivorans RIPI90A. Bioresour Technol 100: 475-479. doi:10.1016/j.biortech.2008.06.011. PubMed: 18653330.
-
(2009)
Bioresour Technol
, vol.100
, pp. 475-479
-
-
Shavandi, M.1
Sadeghizadeh, M.2
Zomorodipour, A.3
Khajeh, K.4
-
23
-
-
84883414986
-
In silico modeling and evaluation of Gordonia alkanivorans for biodesulfurization
-
doi:10.1039/c3mb70132h. PubMed: 23921469
-
Aggarwal S, Karimi IA, Ivan GR (2013) In silico modeling and evaluation of Gordonia alkanivorans for biodesulfurization. Mol Biosyst 9: 2530-2540. doi:10.1039/c3mb70132h. PubMed: 23921469.
-
(2013)
Mol Biosyst
, vol.9
, pp. 2530-2540
-
-
Aggarwal, S.1
Karimi, I.A.2
Ivan, G.R.3
-
24
-
-
0031715972
-
Isolation of a unique benzothiophene-desulphurizing bacterium, Gordonia sp. Strain 213E (NCIMB 40816), and characterization of the desulphurization pathway
-
doi:10.1099/00221287-144-9-2545. PubMed: 9782503
-
Gilbert SC, Morton J, Buchanan S, Oldfield C, McRoberts A (1998) Isolation of a unique benzothiophene-desulphurizing bacterium, Gordonia sp. strain 213E (NCIMB 40816), and characterization of the desulphurization pathway. Microbiology 144: 2545-2553. doi:10.1099/00221287-144-9-2545. PubMed: 9782503.
-
(1998)
Microbiology
, vol.144
, pp. 2545-2553
-
-
Gilbert, S.C.1
Morton, J.2
Buchanan, S.3
Oldfield, C.4
McRoberts, A.5
-
25
-
-
0034939578
-
Desulfurization of benzothiophene by the Gram-negative bacterium, Sinorhizobium sp. KT55
-
doi:10.1007/s002840010285. PubMed: 11400068
-
Tanaka Y, Onaka T, Matsui T, Maruhashi K, Kurane R (2001) Desulfurization of benzothiophene by the Gram-negative bacterium, Sinorhizobium sp. KT55. Curr Microbiol 43: 187-191. doi:10.1007/s002840010285. PubMed: 11400068.
-
(2001)
Curr Microbiol
, vol.43
, pp. 187-191
-
-
Tanaka, Y.1
Onaka, T.2
Matsui, T.3
Maruhashi, K.4
Kurane, R.5
-
26
-
-
78651462647
-
Flux-based analysis of sulfur metabolism in desulfurizing strains of Rhodococcus erythropolis
-
doi:10.1111/j.1574-6968.2010.02179.x. PubMed: 21182538
-
Aggarwal S, Karimi IA, Lee DY (2011) Flux-based analysis of sulfur metabolism in desulfurizing strains of Rhodococcus erythropolis. FEMS Microbiol Lett 315: 115-121. doi:10.1111/j.1574-6968.2010.02179.x. PubMed: 21182538.
-
(2011)
FEMS Microbiol Lett
, vol.315
, pp. 115-121
-
-
Aggarwal, S.1
Karimi, I.A.2
Lee, D.Y.3
-
27
-
-
84865761650
-
Roles of sulfite oxidoreductase and sulfite reductase in improving desulfurization by Rhodococcus erythropolis
-
doi:10.1039/c2mb25127b. PubMed: 22832889
-
Aggarwal S, Karimi IA, Kilbane JJ, Lee DY (2012) Roles of sulfite oxidoreductase and sulfite reductase in improving desulfurization by Rhodococcus erythropolis. Mol Biosyst 8: 2724-2732. doi:10.1039/c2mb25127b. PubMed: 22832889.
-
(2012)
Mol Biosyst
, vol.8
, pp. 2724-2732
-
-
Aggarwal, S.1
Karimi, I.A.2
Kilbane, J.J.3
Lee, D.Y.4
-
28
-
-
59649083929
-
2 can be utilized by the dibenzothiophene monooxygenase from a desulfurizing bacterium Mycobacterium goodii X7B
-
doi:10.1016/j.biortech.2008.12.009. PubMed: 19144512
-
2 can be utilized by the dibenzothiophene monooxygenase from a desulfurizing bacterium Mycobacterium goodii X7B. Bioresour Technol 100: 2594-2599. doi:10.1016/j.biortech.2008.12.009. PubMed: 19144512.
-
(2009)
Bioresour Technol
, vol.100
, pp. 2594-2599
-
-
Li, J.1
Feng, J.2
Li, Q.3
Ma, C.4
Yu, B.5
-
29
-
-
0033635712
-
Biodesulfurization and the upgrading of petroleum distillates
-
doi:10.1016/S0958-1669(00)00154-3. PubMed: 11102787
-
Monticello DJ (2000) Biodesulfurization and the upgrading of petroleum distillates. Curr Opin Biotechnol 11: 540-546. doi:10.1016/S0958-1669(00)00154- 3. PubMed: 11102787.
-
(2000)
Curr Opin Biotechnol
, vol.11
, pp. 540-546
-
-
Monticello, D.J.1
-
30
-
-
84997785069
-
Draft Genome sequence of a benzothiophene-desulfurizing bacterium, Gordona terrae strain C-6
-
([MedlinePgn:]) doi:10.1128/genomeA.00381-13. PubMed: 23788548
-
Wang W, Ma T, Ren Y, Li G (2013) Draft Genome sequence of a benzothiophene-desulfurizing bacterium, Gordona terrae strain C-6. Genome Announc, 1: ([MedlinePgn:]) doi:10.1128/genomeA.00381-13. PubMed: 23788548.
-
(2013)
Genome Announc
, vol.1
-
-
Wang, W.1
Ma, T.2
Ren, Y.3
Li, G.4
-
31
-
-
0036315398
-
Biodesulfurization of benzothiophene and dibenzothiophene by a newly isolated Rhodococcus strain
-
doi:10.1007/s00253-002-0985-9. PubMed: 12111165
-
Tanaka Y, Matsui T, Konishi J, Maruhashi K, Kurane R (2002) Biodesulfurization of benzothiophene and dibenzothiophene by a newly isolated Rhodococcus strain. Appl Microbiol Biotechnol 59: 325-328. doi:10.1007/s00253- 002-0985-9. PubMed: 12111165.
-
(2002)
Appl Microbiol Biotechnol
, vol.59
, pp. 325-328
-
-
Tanaka, Y.1
Matsui, T.2
Konishi, J.3
Maruhashi, K.4
Kurane, R.5
-
32
-
-
79960264362
-
Full-length transcriptome assembly from RNA-seq data without a reference genome
-
doi:10.1038/nbt.1883. PubMed: 21572440
-
Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA et al. (2011) Full-length transcriptome assembly from RNA-seq data without a reference genome. Nat Biotechnol 29: 644-652. doi:10.1038/nbt.1883. PubMed: 21572440.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 644-652
-
-
Grabherr, M.G.1
Haas, B.J.2
Yassour, M.3
Levin, J.Z.4
Thompson, D.A.5
-
33
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
doi:10.1186/gb-2009-10-3-r25. PubMed: 19261174
-
Langmead B, Trapnell C, Pop M, Salzberg SL (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25. doi:10.1186/gb-2009-10-3-r25. PubMed: 19261174.
-
(2009)
Genome Biol
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
34
-
-
75249087100
-
edgeR: A Bioconductor package for differentialexpression analysis of digital gene expression data
-
doi:10.1093/bioinformatics/btp616. PubMed: 19910308
-
Robinson MD, McCarthy DJ, Smyth GK (2010) edgeR: a Bioconductor package for differentialexpression analysis of digital gene expression data. Bioinformatics 26: 139-140. doi:10.1093/bioinformatics/btp616. PubMed: 19910308.
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
35
-
-
39649107143
-
Genetic rearrangement strategy for optimizing the dibenzothiophene biodesulfurization pathway in Rhodococcus erythropolis
-
doi:10.1128/AEM.02319-07. PubMed: 18165370
-
Li GQ, Li SS, Zhang ML, Wang J, Zhu L et al. (2008) Genetic rearrangement strategy for optimizing the dibenzothiophene biodesulfurization pathway in Rhodococcus erythropolis. Appl Environ Microbiol 74: 971-976. doi:10.1128/AEM.02319-07. PubMed: 18165370.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 971-976
-
-
Li, G.Q.1
Li, S.S.2
Zhang, M.L.3
Wang, J.4
Zhu, L.5
-
36
-
-
67349103442
-
Clip domain serineprotease and its homolog respond to Vibrio challenge in Chinese white shrimp Fenneropenaeus chinensis
-
doi:10.1016/j.fsi.2009.03.004. PubMed: 19332134
-
Ren Q, Xu ZL, Wang XW, Zhao XF, Wang JX (2009) Clip domain serineprotease and its homolog respond to Vibrio challenge in Chinese white shrimp Fenneropenaeus chinensis. Fish Shellfish Immunol 26: 787-798. doi:10.1016/j.fsi.2009.03.004. PubMed: 19332134.
-
(2009)
Fish Shellfish Immunol
, vol.26
, pp. 787-798
-
-
Ren, Q.1
Xu, Z.L.2
Wang, X.W.3
Zhao, X.F.4
Wang, J.X.5
|