MR vascular fingerprinting: A new approach to compute cerebral blood volume, mean vessel radius, and oxygenation maps in the human brain

NeuroImage

Volumn 89, Issue , 2014, Pages 262-270

  Christen, T ^a   Pannetier, N A ^b,c   Ni, W W ^a   Qiu, D ^a   Moseley, M E ^a   Schuff, N ^b,c   Zaharchuk, G ^a  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b VETERANS AFFAIRS MEDICAL CENTER   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Blood oxygen saturation; Cerebral blood volume; Fingerprint; Magnetic resonance imaging; Numerical simulation; Vessel size imaging

Indexed keywords

ADULT; ARTICLE; BLOOD OXYGEN TENSION; BLOOD OXYGENATION; BLOOD VESSEL FUNCTION; BOLD SIGNAL; BRAIN BLOOD VESSEL; BRAIN BLOOD VOLUME; ELECTRON SPIN RESONANCE; FEMALE; GRAY MATTER; HUMAN; MAGNETIC FIELD; MALE; NORMAL HUMAN; NUCLEAR MAGNETIC RESONANCE; OXIMETRY; OXYGENATION; PRIORITY JOURNAL; STEADY STATE; WHITE MATTER;

BLOOD OXYGEN SATURATION; CEREBRAL BLOOD VOLUME; FINGERPRINT; MAGNETIC RESONANCE IMAGING; NUMERICAL SIMULATION; VESSEL SIZE IMAGING;

ADULT; BLOOD VOLUME DETERMINATION; BRAIN; FEMALE; HUMANS; MAGNETIC RESONANCE IMAGING; MALE; MIDDLE AGED; MODELS, THEORETICAL; OXYGEN;

EID: 84892973852     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2013.11.052     Document Type: Article

References (48)

1. An H., Lin W. Quantitative measurements of cerebral blood oxygen saturation using magnetic resonance imaging. J. Cereb. Blood Flow Metab. 2000, 20:1225-1236.
2. Bandettini P.A., Wong E.C. Effects of biophysical and physiologic parameters on brain activation-induced R2* and R2 changes: simulations using a deterministic diffusion model. Int. J. Imaging Syst. Technol. 1995, 6:133-152.
3. Bihan D.L. Apparent diffusion coefficient and beyond: what diffusion MR imaging can tell us about tissue structure. Radiology 2013, 268:318-322.
4. Bulte D., Chiarelli P., Wise R., Jezzard P. Measurement of cerebral blood volume in humans using hyperoxic MRI contrast. J. Magn. Reson. Imaging 2007, 26:894-899.
5. Carmeliet P., Jain R.K. Angiogenesis in cancer and other diseases. Nature 2000, 407:249-257.
6. Christen T., Lemasson B., Pannetier N., Farion R., Segebarth C., Rémy C., Barbier E.L. Evaluation of a quantitative blood oxygenation level-dependent (qBOLD) approach to map local blood oxygen saturation. NMR Biomed. 2011, 24(4):393-403. (May).
7. Christen T., Lemasson B., Pannetier N., Farion R., Remy C., Zaharchuk G., Barbier E.L. Is t2* enough to assess oxygenation? Quantitative blood oxygen level-dependent analysis in brain tumor. Radiology 2012, 262:495-502.
8. Christen T., Ni W., Qiu D., Schmiedeskamp H., Bammer R., Moseley M., Zaharchuk G. High-resolution cerebral blood volume imaging in humans using the blood pool contrast agent ferumoxytol. Magn. Reson. Med. 2013, 70:705-710.
9. Dennie J., Mandeville J.B., Boxerman J.L., Packard S.D., Rosen B.R., Weisskoff R.M. NMR imaging of changes in vascular morphology due to tumor angiogenesis. Magn. Reson. Med. 1998, 40:793-799.
10. Dickson J.D., Ash T.W.J., Williams G.B., Sukstanskii A.L., Ansorge R.E., Yablonskiy D.A. Quantitative phenomenological model of the BOLD contrast mechanism. J. Magn. Reson. 2011, 212:17-25.
11. Duyn J.H., van Gelderen P., Li T.-Q., de Zwart J.A., Koretsky A.P., Fukunaga M. High-field MRI of brain cortical substructure based on signal phase. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:11796-11801.
12. Eichling J.O., Raichle M.E., Grubb R.L., Larson K.B., Ter-Pogossian M.M. In vivo determination of cerebral blood volume with radioactive oxygen-15 in the monkey. Circ. Res. 1975, 37:707-714.
13. Fernández-Seara M.A., Techawiboonwong A., Detre J.A., Wehrli F.W. MR susceptometry for measuring global brain oxygen extraction. Magn. Reson. Med. 2006, 55:967-973.
14. Grandin C.B., Bol A., Smith A.M., Michel C., Cosnard G. Absolute CBF and CBV measurements by MRI bolus tracking before and after acetazolamide challenge: repeatabilily and comparison with PET in humans. NeuroImage 2005, 26:525-535.
15. Haacke E.M., Tang J., Neelavalli J., Cheng Y.C.N. Susceptibility mapping as a means to visualize veins and quantify oxygen saturation. J. Magn. Reson. Imaging 2010, 32:663-676.
16. He X., Yablonskiy D.A. Quantitative BOLD: mapping of human cerebral deoxygenated blood volume and oxygen extraction fraction: default state. Magn. Reson. Med. 2007, 57:115-126.
17. Hunter J.M., Kwan J., Malek-Ahmadi M., Maarouf C.L., Kokjohn T.A., Belden C., Sabbagh M.N., Beach T.G., Roher A.E. Morphological and pathological evolution of the brain microcirculation in aging and Alzheimer's disease. PloS ONE 2012, 7:e36893.
18. Jochimsen T.H., Ivanov D., Ott D.V.M., Heinke W., Turner R., Möller H.E., Reichenbach J.R. Whole-brain mapping of venous vessel size in humans using the hypercapnia-induced BOLD effect. NeuroImage 2010, 51:765-774.
19. Kiselev V.G., Strecker R., Ziyeh S., Speck O., Hennig J. Vessel size imaging in humans. Magn. Reson. Med. 2005, 53:553-563.
20. Klassen L.M., Menon R.S. NMR simulation analysis of statistical effects on quantifying cerebrovascular parameters. Biophys. J. 2007, 92:1014-1021.
21. Krüger G., Kastrup A., Glover G.H. Neuroimaging at 1.5T and 3.0T: comparison of oxygenation-sensitive magnetic resonance imaging. Magn. Reson. Med. 2001, 45:595-604.
22. Lauwers F., Cassot F., Lauwers-Cances V., Puwanarajah P., Duvernoy H. Morphometry of the human cerebral cortex microcirculation: general characteristics and space-related profiles. NeuroImage 2008, 39:936-948.
23. Leenders K.L., Perani D., Lammertsma A.A., Heather J.D., Buckingham P., Healy M.J., Gibbs J.M., Wise R.J., Hatazawa J., Herold S. Cerebral blood flow, blood volume and oxygen utilization. Normal values and effect of age. Brain J. Neurol. 1990, 113(Pt 1):27-47.
24. Lindeberg T. Scale-space for discrete signals. IEEE Trans. Pattern Anal. Mach. Intell. 1990, 12:234-254.
25. Liu C. Susceptibility tensor imaging. Magn. Reson. Med. 2010, 63:1471-1477.
26. Ma D., Gulani V., Seiberlich N., Liu K., Sunshine J.L., Duerk J.L., Griswold M.A. Magnetic resonance fingerprinting. Nature 2013, 495:187-192.
27. Marques J.P., Bowtell R. Application of a Fourier-based method for rapid calculation of field inhomogeneity due to spatial variation of magnetic susceptibility. Concepts Magn. Reson. Part B: Magn. Reson. Eng. 2005, 25B:65-78.
28. McLeod B.C., Szczepiorkowski Z.M., Weinstein R., Winters J. Apheresis: Principles and Practice 2010, AABB Press, Bethesda, Md.
29. Miller K.L., Hargreaves B.A., Lee J., Ress D., deCharms R.C., Pauly J.M. Functional brain imaging using a blood oxygenation sensitive steady state. Magn. Reson. Med. 2003, 50:675-683.
30. Newman G.C., Delucia-Deranja E., Tudorica A., Hospod F.E., Patlak C.S. Cerebral blood volume measurements by T*2-weighted MRI and contrast infusion. Magn. Reson. Med. 2003, 50:844-855.
31. Ogawa S., Lee T.M., Kay A.R., Tank D.W. Brain magnetic resonance imaging with contrast dependent on blood oxygenation. Proc. Natl. Acad. Sci. U. S. A. 1990, 87:9868-9872.
32. Otsu N. A threshold selection method from gray-level histograms. IEEE Trans. Syst. Man Cybern. 1979, 9:62-66.
33. Pannetier N.A., Debacker C.S., Mauconduit F., Christen T., Barbier E.L. A simulation tool for dynamic contrast enhanced MRI. PloS ONE 2013, 8:e57636.
34. Pannetier N.A., Sohlin M., Christen T., Schad L., Schuff N. Numerical modeling of susceptibility-related MR signal dephasing with vessel size measurement: Phantom validation at 3T. Magn. Reson. Med. 2013, (Oct 24). 10.1002/mrm.24968.
35. Rigau V., Morin M., Rousset M.-C., de Bock F., Lebrun A., Coubes P., Picot M.-C., Baldy-Moulinier M., Bockaert J., Crespel A., Lerner-Natoli M. Angiogenesis is associated with blood-brain barrier permeability in temporal lobe epilepsy. Brain J. Neurol. 2007, 130:1942-1956.
36. Rosen B.R., Belliveau J.W., Vevea J.M., Brady T.J. Perfusion imaging with NMR contrast agents. Magn. Reson. Med. 1990, 14:249-265.
37. Salomir R., de Senneville B.D., Moonen C.T. A fast calculation method for magnetic field inhomogeneity due to an arbitrary distribution of bulk susceptibility. Concepts Magn. Reson. B 2003, 19:26-34.
38. Schmiedeskamp H., Straka M., Newbould R.D., Zaharchuk G., Andre J.B., Olivot J.-M., Moseley M.E., Albers G.W., Bammer R. Combined spin- and gradient-echo perfusion-weighted imaging. Magn. Reson. Med. 2012, 68(1):30-40. (Jul).
39. Sedlacik J., Reichenbach J.R. Validation of quantitative estimation of tissue oxygen extraction fraction and deoxygenated blood volume fraction in phantom and in vivo experiments by using MRI. Magn. Reson. Med. 2010, 63:910-921.
40. Sedlacik J., Rauscher A., Reichenbach J.R. Obtaining blood oxygenation levels from MR signal behavior in the presence of single venous vessels. Magn. Reson. Med. 2007, 58:1035-1044.
41. Sobesky J., Zaro Weber O., Lehnhardt F.-G., Hesselmann V., Neveling M., Jacobs A., Heiss W.-D. Does the mismatch match the penumbra? Magnetic resonance imaging and positron emission tomography in early ischemic stroke. Stroke J. Cereb. Circ. 2005, 36:980-985.
42. Sohlin M.C., Schad L.R. Susceptibility-related MR signal dephasing under nonstatic conditions: experimental verification and consequences for qBOLD measurements. J. Magn. Reson. Imaging 2011, 33:417-425.
43. Spees W.M., Yablonskiy D.A., Oswood M.C., Ackerman J.J. Water proton MR properties of human blood at 1.5 Tesla: magnetic susceptibility, T(1), T(2), T*(2), and non-Lorentzian signal behavior. Magn. Reson. Med. 2001, 45:533-542.
44. Srour J.M., Shin W., Shah S., Sen A., Carroll T.J. SCALE-PWI: a pulse sequence for absolute quantitative cerebral perfusion imaging. J. Cereb. Blood Flow Metab. 2011, 31:1272-1282.
45. Troprès I., Grimault S., Vaeth A., Grillon E., Julien C., Payen J.F., Lamalle L., Décorps M. Vessel size imaging. Magn. Reson. Med. 2001, 45:397-408.
46. Vaupel P., Mayer A. Hypoxia in cancer: significance and impact on clinical outcome. Cancer Metastasis Rev. 2007, 26:225-239.
47. Wenz F., Rempp K., Brix G., Knopp M.V., Gückel F., Heß T., van Kaick G. Age dependency of the regional cerebral blood volume (rCBV) measured with dynamic susceptibility contrast MR imaging (DSC). Magn. Reson. Imaging 1996, 14:157-162.
48. Yablonskiy D.A., Haacke E.M. Theory of NMR signal behavior in magnetically inhomogeneous tissues: the static dephasing regime. Magn. Reson. Med. 1994, 32:749-763.