Development of user-friendly functional molecular markers for VvDXS gene conferring muscat flavor in grapevine

Molecular Breeding

Volumn 33, Issue 1, 2014, Pages 235-241

  Emanuelli, F ^a   Sordo, M ^a   Lorenzi, S ^a   Battilana, J ^a   Grando, M S ^a  

^a RESEARCH AND INNOVATION CENTRE   (Italy)

Author keywords

Aroma; Breeding; DXS; Functional markers; Grapevine; High resolution melting

Indexed keywords

ASSAYS; DIAGNOSIS; FRUITS; MELTING; WINE;

AROMA; BREEDING; DXS; FUNCTIONAL MARKER; GERMPLASMS; GRAPEVINE; HIGH RESOLUTION; HIGH-RESOLUTION MELTING; MINISEQUENCING; MOLECULAR MARKER;

GENES;

VITACEAE; VITIS;

EID: 84892477438     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-013-9929-6     Document Type: Article

References (24)

1. Alleweldt G, Possingham JV (1988) Progress in grapevine breeding. Theor Appl Genet 75: 669-673.
2. Battilana J, Costantini L, Emanuelli F, Sevini F, Segala C, Moser S, Velasco R, Versini G, Grando MS (2009) The 1-deoxy-D:-xylulose 5-phosphate synthase gene co-localizes with a major QTL affecting monoterpene content in grapevine. Theor Appl Genet 118: 653-669.
3. Battilana J, Emanuelli F, Gambino G, Gribaudo I, Gasperi F, Boss PK, Grando MS (2011) Functional effect of grapevine 1-deoxy-D-xylulose 5-phosphate synthase substitution K284N on Muscat flavour formation. J Exp Bot 62: 5497-5508.
4. Bonfield JK, Smith KF, Staden R (1995) A new DNA sequence assembly program. Nucleic Acids Res 23: 4992-4999.
5. Do H, Krypuy M, Mitchell PL, Fox SB, Dobrovic A (2008) High resolution melting analysis for rapid and sensitive EGFR and KRAS mutation detection in formalin fixed paraffin embedded biopsies. BMC Cancer 8: 142.
6. Duchêne E, Butterlin G, Claudel P, Dumas V, Jaegli N, Merdinoglu D (2009) A grapevine (Vitis vinifera L.) deoxy-d-xylulose synthase gene colocates with a major quantitative trait loci for terpenol content. Theor Appl Genet 118: 541-552.
7. Eibach R, Zyprian E, Welter L, Töpfer R (2007) The use of molecular markers for pyramiding resistance genes in grapevine breeding. Vitis 46: 120-124.
8. Emanuelli F, Battilana J, Costantini L, Le Cunff L, This P, Grando MS (2010) A candidate gene association study for muscat flavor in grapevine Vitis vinifera L. BMC Plant Biol 10: 241.
9. Estévez JM, Cantero A, Reindl A, Reichler S, León P (2001) 1-Deoxy-d-xylulose-5-phosphate synthase, a limiting enzyme for plastidic isoprenoid biosynthesis in plants. J Biol Chem 276: 22901-22909.
10. FAOSTAT (2011) FAO statistical databases, production statistics. http://faostat. fao. org/.
11. Garritano S, Gemignani F, Voegele C, Nguyen-Dumont T, Le Calvez-Kelm F, De Silva D, Lesueur F, Landi S, Tavtigian SV (2009) Determining the effectiveness of high resolution melting analysis for SNP genotyping and mutation scanning at the TP53 locus. BMC Genet 10: 5.
12. Gonzalez-Bosquet J, Calcei J, Wei JS, Garcia-Closas M, Sherman ME et al (2011) Detection of somatic mutations by high-resolution DNA melting (HRM) analysis in multiple cancers. PLoS ONE 6(1): e14522. doi: 10. 1371/journal. pone. 0014522.
13. Gunata Y, Bayonove C, Baumes R (1985) The aroma of grapes I. Extraction and determination of free and glycosidically bound fractions of some grape aroma components. J Chromatogr A 331: 83-90.
14. Konieczny A, Ausubel FM (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers. Plant J 4: 403-410.
15. Lois LM, Rodríguez-ConcepciónM GallegoF, Campos N, Boronat A (2000) Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-d-xylulose 5-phosphate synthase. Plant J 22: 503-513.
16. Mateo JJ, Jiménez M (2000) Monoterpenes in grape juice and wines. J Chromatogr A 881: 557-567.
17. OIV (2009) 2nd Edition of the OIV descriptor list for grape varieties and Vitis species. International Organisation of Vine and Wine (OIV). http://www. oiv. int.
18. Reisch BI, Owens CL, Cousins PS (2012) Grape. In Badenes ML, Byrne DH (eds) Fruit breeding, handbook of plant breeding, vol 8. Springer Science + Business Media, LLC, New York, pp 225-262.
19. Ribéreau-Gayon P, Boiron JN, Terrier A (1975) Aroma of Muscat grape cultivars. J Agric Food Chem 23: 1042-1047.
20. Takano EA, Mitchell G, Fox SB, Dobrovic A (2008) Rapid detection of carriers with BRCA1 and BRCA2 mutations using high resolution melting analysis. BMC Cancer 8: 59.
21. Töpfer R, Hausmann L, Eibach R (2011) Molecular breeding. In: Zapater JM, Blondon AM, Kole C (eds) Genetics, genomics, and breeding of grapes. Science Publishers, New Hampshire, USA, pp 160-185.
22. Torregrosa L, Fernandez L, Bouquet A, Boursiquot J-M, Pelsy F, Martínez-Zapater JM (2011) Origins and consequences of somatic variation in grapevine. In: Zapater JM, Blondon AM, Kole C (eds) Genetics, genomics, and breeding of grapes. Science Publishers, New Hampshire, USA, pp 68-92.
23. Vincze T, Posfai J, Roberts RJ (2003) NEBcutter: a program to cleave DNA with restriction enzymes. Nucleic Acids Res 31: 3688-3691. http://tools. neb. com/NEBcutter2/.
24. Wittwer CT, Reed GH, Gundry CN, Vandersteen JG, Pryor RJ (2003) High-resolution genotyping by amplicon melting analysis using LCGreen. Clin Chem 49: 853-860.