-
1
-
-
84892426853
-
Deformable virtual cell migration: Biomechanical and multi-agent modeling of cell migration-agent modeling of cell migration
-
2007
-
Ballet, P., Tracqui, P.: Deformable virtual cell migration: biomechanical and multi-agent modeling of cell migration-agent modeling of cell migration. RSTI, TSI Series (Special issue "Modeling and simulation for post-genomics") 26(1-2/2007) (2007)
-
(2007)
RSTI, TSI Series (Special Issue "Modeling and Simulation for Post-genomics")
, vol.26
, Issue.1-2
-
-
Ballet, P.1
Tracqui, P.2
-
2
-
-
45749115786
-
Self-propelled particle model for cell-sorting phenomena
-
Belmonte, J.M., Thomas, G.L., Brunnet, L.G., de Almeida, R.M.C., Chaté, H.: Self-propelled particle model for cell-sorting phenomena. Physical Review Letters 100, 248702 (2008)
-
(2008)
Physical Review Letters
, vol.100
, pp. 248702
-
-
Belmonte, J.M.1
Thomas, G.L.2
Brunnet, L.G.3
De Almeida, R.M.C.4
Chaté, H.5
-
3
-
-
84875376971
-
Simulation of cellular packing in non-proliferative epithelia
-
Chélin, Y., Azzag, K., Canadas, P., Averseng, J., Baghdiguian, S., Maurin, B.: Simulation of cellular packing in non-proliferative epithelia. Journal of Biomechanics 46(6), 1075-1080 (2013)
-
(2013)
Journal of Biomechanics
, vol.46
, Issue.6
, pp. 1075-1080
-
-
Chélin, Y.1
Azzag, K.2
Canadas, P.3
Averseng, J.4
Baghdiguian, S.5
Maurin, B.6
-
4
-
-
84874607721
-
From Single Cell to Simple Creature Morphology and Metabolism
-
MIT Press
-
Cussat-Blanc, S., Luga, H., Duthen, Y.: From Single Cell to Simple Creature Morphology and Metabolism. In: Artificial Life XI, pp. 134-141. MIT Press (2008)
-
(2008)
Artificial Life XI
, pp. 134-141
-
-
Cussat-Blanc, S.1
Luga, H.2
Duthen, Y.3
-
5
-
-
13944282641
-
Parallel computing platform for the agent-based modeling of multicellular biological systems
-
Liew, K.-M., Shen, H., See, S., Cai, W. (eds.) PDCAT 2004. Springer, Heidelberg
-
Da-Jun, T., Tang, F., Lee, T., Sarda, D., Krishnan, A., Goryachev, A.: Parallel computing platform for the agent-based modeling of multicellular biological systems. In: Liew, K.-M., Shen, H., See, S., Cai, W. (eds.) PDCAT 2004. LNCS, vol. 3320, pp. 5-8. Springer, Heidelberg (2004)
-
(2004)
LNCS
, vol.3320
, pp. 5-8
-
-
Da-Jun, T.1
Tang, F.2
Lee, T.3
Sarda, D.4
Krishnan, A.5
Goryachev, A.6
-
6
-
-
38049038425
-
A computational system for investigating chemotaxis-based cell aggregation
-
Almeida e Costa, F., Rocha, L.M., Costa, E., Harvey, I., Coutinho, A. (eds.) ECAL 2007. Springer, Heidelberg
-
Eyiyurekli, M., Lelkes, P.I., Breen, D.E.: A computational system for investigating chemotaxis-based cell aggregation. In: Almeida e Costa, F., Rocha, L.M., Costa, E., Harvey, I., Coutinho, A. (eds.) ECAL 2007. LNCS (LNAI), vol. 4648, pp. 1034-1049. Springer, Heidelberg (2007)
-
(2007)
LNCS (LNAI)
, vol.4648
, pp. 1034-1049
-
-
Eyiyurekli, M.1
Lelkes, P.I.2
Breen, D.E.3
-
7
-
-
80052658021
-
A change in boundary conditions induces a discontinuity of tissue flow in chicken embryos and the formation of the cephalic fold
-
Fleury, V.: A change in boundary conditions induces a discontinuity of tissue flow in chicken embryos and the formation of the cephalic fold. The European Physical Journal E 34(7), 1-13 (2011)
-
(2011)
The European Physical Journal E
, vol.34
, Issue.7
, pp. 1-13
-
-
Fleury, V.1
-
8
-
-
0000135489
-
Simulation of biological cell sorting using a two-dimensional extended potts model
-
Graner, F., Glazier, J.A.: Simulation of biological cell sorting using a two-dimensional extended potts model. Physical Review Letters 69(13), 2013-2016 (1992)
-
(1992)
Physical Review Letters
, vol.69
, Issue.13
, pp. 2013-2016
-
-
Graner, F.1
Glazier, J.A.2
-
9
-
-
77957786145
-
A cell-based simulation software for multi-cellular systems
-
Hoehme, S., Drasdo, D.: A cell-based simulation software for multi-cellular systems. Bioinformatics 26(20), 2641-2642 (2010)
-
(2010)
Bioinformatics
, vol.26
, Issue.20
, pp. 2641-2642
-
-
Hoehme, S.1
Drasdo, D.2
-
10
-
-
84884816298
-
A software architecture for multi-cellular system simulations on graphics processing units
-
Jeannin-Girardon, A., Ballet, P., Rodin, V.: A software architecture for multi-cellular system simulations on graphics processing units. Acta Biotheoretica, 1-11 (2013), http://dx.doi.org/10.1007/s10441-013-9187-3
-
(2013)
Acta Biotheoretica
, pp. 1-11
-
-
Jeannin-Girardon, A.1
Ballet, P.2
Rodin, V.3
-
11
-
-
0035957392
-
How amoeboids self-organize into a fruiting body: Multicellular coordination in dictyostelium discoideum
-
Marée, A.F.M., Hogeweg, P.: How amoeboids self-organize into a fruiting body: Multicellular coordination in dictyostelium discoideum. Proceedings of the National Academy of Sciences 98(7), 3879-3883 (2001)
-
(2001)
Proceedings of the National Academy of Sciences
, vol.98
, Issue.7
, pp. 3879-3883
-
-
Marée, A.F.M.1
Hogeweg, P.2
-
12
-
-
0037339268
-
Force generation by actin polymerization ii: The elastic ratchet and tethered filaments
-
Mogilner, A., Oster, G.: Force generation by actin polymerization ii: The elastic ratchet and tethered filaments. Biophysical Journal 84(3), 1591-1605 (2003)
-
(2003)
Biophysical Journal
, vol.84
, Issue.3
, pp. 1591-1605
-
-
Mogilner, A.1
Oster, G.2
-
13
-
-
54049114302
-
Virtual Cell modelling and simulation software environment
-
Moraru, I.I., Schaff, J.C., Slepchenko, B.M., Blinov, M.L., Morgan, F., Lakshminarayana, A., Gao, F., Li, Y., Loew, L.M.: Virtual Cell modelling and simulation software environment. IET Systems Biology 2(5), 352-362 (2008)
-
(2008)
IET Systems Biology
, vol.2
, Issue.5
, pp. 352-362
-
-
Moraru, I.I.1
Schaff, J.C.2
Slepchenko, B.M.3
Blinov, M.L.4
Morgan, F.5
Lakshminarayana, A.6
Gao, F.7
Li, Y.8
Loew, L.M.9
-
14
-
-
24344437156
-
Microbial cell modeling via reacting diffusive particles
-
Plimpton, S.J., Slepoy, A.: Microbial cell modeling via reacting diffusive particles. Journal Of Physics 16, 305-309 (2005)
-
(2005)
Journal Of Physics
, vol.16
, pp. 305-309
-
-
Plimpton, S.J.1
Slepoy, A.2
-
15
-
-
77953878345
-
High performance cellular level agent-based simulation with flame for the gpu
-
Richmond, P.,Walker, D., Coakley, S., Romano, D.: High performance cellular level agent-based simulation with flame for the gpu. Briefings in Bioinformatics 11(3), 334-347 (2010)
-
(2010)
Briefings in Bioinformatics
, vol.11
, Issue.3
, pp. 334-347
-
-
Richmond, P.1
Walker, D.2
Coakley, S.3
Romano, D.4
-
16
-
-
0000431019
-
Quantitative analysis of cell motion during sorting in 2d aggregates of hydra cells
-
Rieu, J.P., Kataoka, N., Sawada, Y.: Quantitative analysis of cell motion during sorting in 2d aggregates of hydra cells. Physical Review E 57, 924-931 (1998)
-
(1998)
Physical Review E
, vol.57
, pp. 924-931
-
-
Rieu, J.P.1
Kataoka, N.2
Sawada, Y.3
-
17
-
-
33646015030
-
A Computational Model of Cellular Morphogenesis in Plants
-
Capcarrère, M.S., Freitas, A.A., Bentley, P.J., Johnson, C.G., Timmis, J. (eds.) ECAL 2005. Springer, Heidelberg
-
Rudge, T., Haseloff, J.: A Computational Model of CellularMorphogenesis in Plants. In: Capcarrère, M.S., Freitas, A.A., Bentley, P.J., Johnson, C.G., Timmis, J. (eds.) ECAL 2005. LNCS (LNAI), vol. 3630, pp. 78-87. Springer, Heidelberg (2005)
-
(2005)
LNCS (LNAI)
, vol.3630
, pp. 78-87
-
-
Rudge, T.1
Haseloff, J.2
-
18
-
-
84891683670
-
Reconstruction of tissues by dissiciated cells
-
Steinberg, M.: Reconstruction of tissues by dissiciated cells. Science 141(3579) (1963)
-
(1963)
Science
, vol.141
, Issue.3579
-
-
Steinberg, M.1
-
19
-
-
84892408262
-
Using mechanics in the modelling of meristem morphogenesis
-
Stoma, S., Chopard, J., Godin, C., Traas, J.: Using mechanics in the modelling of meristem morphogenesis. In: 5th International Workshop on Functional-Structural Plant Models, Napier, New Zealand, pp. 52, 1-4 (2007)
-
(2007)
5th International Workshop on Functional-Structural Plant Models, Napier, New Zealand
-
-
Stoma, S.1
Chopard, J.2
Godin, C.3
Traas, J.4
-
20
-
-
0033031386
-
E-cell: Software environment for whole-cell simulation
-
Tomita, M., Hashimoto, K., Takahashi, K., Shimizu, T.S., Matsuzaki, Y., Miyoshi, F., Saito, K., Tanida, S., Yugi, K., Venter, J.C., III, C.A.H.: E-cell: software environment for whole-cell simulation. Bioinformatics 15(1), 72-84 (1999)
-
(1999)
Bioinformatics
, vol.15
, Issue.1
, pp. 72-84
-
-
Tomita, M.1
Hashimoto, K.2
Takahashi, K.3
Shimizu, T.S.4
Matsuzaki, Y.5
Miyoshi, F.6
Saito, K.7
Tanida, S.8
Yugi, K.9
Venter III, J.C.10
C, A.H.11
-
21
-
-
67449089661
-
The virtual cell - A candidate coordinator for middle-out modelling of biological systems
-
Walker, D.C., Southgate, J.: The virtual cell - a candidate coordinator for middle-out modelling of biological systems. Briefings in Bioinformatics 10(4), 450-461 (2008)
-
(2008)
Briefings in Bioinformatics
, vol.10
, Issue.4
, pp. 450-461
-
-
Walker, D.C.1
Southgate, J.2
-
22
-
-
80054761006
-
Computer simulations of cell sorting due to differential adhesion
-
Zhang, Y., Thomas, G.L., Swat, M., Shirinifard, A., Glazier, J.A.: Computer simulations of cell sorting due to differential adhesion. PLoS ONE 6(10) (2011)
-
(2011)
PLoS ONE
, vol.6
, Issue.10
-
-
Zhang, Y.1
Thomas, G.L.2
Swat, M.3
Shirinifard, A.4
Glazier, J.A.5
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