Nitrate/oxygen co-sensing by an NreA/NreB sensor complex of Staphylococcus carnosus

Molecular Microbiology

Volumn 91, Issue 2, 2014, Pages 381-393

  Nilkens, Stephanie ^a   Koch Singenstreu, Mareike ^a   Niemann, Volker ^b   Götz, Friedrich ^b   Stehle, Thilo ^b,c   Unden, Gottfried ^a  

^a JOHANNES GUTENBERG UNIVERSITY   (Germany)

^b UNIVERSITY OF TÜBINGEN   (Germany)

^c VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NITRATE; NITRATE RECEPTOR; NITRATE REDUCTASE; OXYGEN; PHOSPHATASE; RECEPTOR; UNCLASSIFIED DRUG;

AEROBIC CAPACITY; ARTICLE; AUTOPHOSPHORYLATION; CELLULAR, SUBCELLULAR AND MOLECULAR BIOLOGICAL PHENOMENA AND FUNCTIONS; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME PHOSPHORYLATION; GENE DELETION; IN VITRO STUDY; NITRATE SENSING; NONHUMAN; OXYGEN SENSING; PRIORITY JOURNAL; PROTEIN INTERACTION; REPORTER GENE; STAPHYLOCOCCUS CARNOSUS; TWO HYBRID SYSTEM;

BACTERIA (MICROORGANISMS); STAPHYLOCOCCUS; STAPHYLOCOCCUS CARNOSUS;

BACTERIAL PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; NITRATES; OXYGEN; PHOSPHORIC MONOESTER HYDROLASES; PHOSPHORYLATION; STAPHYLOCOCCUS;

EID: 84891944747     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/mmi.12464     Document Type: Article

References (31)

1. Aravind, L., and Ponting, C.P. (1997) The GAF domain: an evolutionary link between diverse phototransducing proteins. Trends Biochem Sci 22: 458-459.
2. Bertani, G. (1951) Studies on lysogenesis. I. The mode of phage liberation by lysogenic Escherichia coli. J Bacteriol 62: 293-300.
3. Boudes, M., Lazar, N., Graille, M., Durand, D., Gaidenko, T.A., Stewart, V., and van Tilbeurgh, H. (2012) The structure of the NasR transcription antiterminator reveals a one-component system with a NIT nitrate receptor coupled to an ANTAR RNA-binding effector. Mol Microbiol 85: 431-444.
4. Brückner, R. (1992) A series of shuttle vectors for Bacillus subtilis and Escherichia coli. Gene 122: 187-192.
5. Cheung, J., and Hendrickson, W.A. (2009) Structural analysis of ligand stimulation of the histidine kinase NarX. Structure 17: 190-201.
6. Fedtke, I., Kamps, A., Krismer, B., and Götz, F. (2002) The nitrate reductase and nitrite reductase operons and the narT gene of Staphylococcus carnosus are positively controlled by the novel two-component system NreBC. J Bacteriol 184: 6624-6634.
7. Götz, F., and Schumacher, B. (1987) Improvement of protoplast transformation in Staphylococcus carnosus. FEMS Microbiol Lett 40: 285-288.
8. Gunsalus, R.P. (1992) Control of electron flow in Escherichia coli: coordinated transcription of respiratory pathway genes. J Bacteriol 174: 7069-7074.
9. Janausch, I.G., Garcia-Moreno, I., and Unden, G. (2002) Function of DcuS from Escherichia coli as a fumarate-stimulated histidine protein kinase in vitro. J Biol Chem 277: 39809-39814.
10. 2-labile iron-sulphur cluster of the FNR type. Mol Microbiol 52: 713-723.
11. Karimova, G., Pidoux, J., Ullmann, A., and Ladant, D. (1998) A bacterial two-hybrid system based on a reconstituted signal transduction pathway. Proc Natl Acad Sci USA 95: 5752-5756.
12. Karimova, G., Dautin, N., and Ladant, D. (2005) Interaction network among Escherichia coli membrane proteins involved in cell division as revealed by bacterial two-hybrid analysis. J Bactoriol 187: 2233-2243.
13. Koropatkin, N.M., Pakrasi, H.B., and Smith, T.J. (2006) Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity. Proc Natl Acad Sci USA 103: 9820-9825.
14. Krell, T., Lacal, J., Busch, A., Silva-Jiménez, H., Guazzaroni, M.E., and Ramos, J.L. (2010) Bacterial sensor kinases: diversity in the recognition of environmental signals. Annu Rev Microbiol 64: 539-559.
15. Löfblom, J., Kronqvist, N., Uhlén, M., Ståhl, S., and Wernérus, H. (2007) Optimization of electroporation-mediated transformation: Staphylococcus carnosus as model organism. J Appl Microbiol 102: 736-747.
16. 2+ cluster in the oxygen sensor kinase NreB of Staphylococcus carnosus. Biochemistry 47: 13921-13932.
17. Partch, C.L., and Gardner, K.H. (2010) Coactivator recruitment: a new role for PAS domains in transcriptional regulation by the bHLH-PAS family. J Cell Pysiol 223: 553-557.
18. Peschel, A., Augustin, J., Kupke, T., Stevanovic, S., and Götz, F. (1993) Regulation of epidermin biosynthetic genes by EpiQ. Mol Microbiol 9: 31-39.
19. Razeto, A., Ramakrishnan, V., Litterst, C.M., Giller, K., Griesinger, C., Carlomagno, T., etal. (2004) Structure of the NCoA-1/SRC-1 PAS-B domain bound to the LXXLL motif of the STAT6 transactivation domain. J Mol Biol 336: 319-329.
20. Rosenstein, R., Peschel, A., Wieland, B., and Götz, F. (1992) Expression and regulation of the antimonite, arsenite, and arsenate resistance operon of Staphylococcus xylosus plasmid pSX267. J Bacteriol 174: 3676-3683.
21. Rosenstein, R., Nerz, C., Biswas, L., Resch, A., Raddatz, G., Schuster, S.C., and Götz, F. (2009) Genome analysis of the meat starter culture bacterium Staphylococcus carnosus TM300. Appl Environ Microbiol 75: 811-822.
22. Sambrook, J., and Russell, D.W. (2001) Molecular Cloning: A Laboratory Manual, 3rd edn, Vol. 3. New York: Cold Spring Harbor Laboratory Press.
23. Schlag, S., Fuchs, S., Nerz, C., Gaupp, R., Engelmann, S., Liebeke, M., etal. (2008) Characterization of the oxygen-responsive NreABC regulon of Staphylococcus aureus. J Bacteriol 190: 7847-7858.
24. Schleifer, K.H., and Fischer, U. (1982) Description of a new species of the genus Staphylococcus: Staphylococcus carnosus. Int J Syst Bacteriol 32: 153-156.
25. Sousa, E.H.S., Tuckerman, J.R., Gondium, A.C.S., Gonzalez, G., and Gilles-Gonzalez, M. (2013) Signal transduction and phosphoryl transfer by a FixL hybrid kinase with low oxygen affinity: importance of the vicinal PAS domain and receiver aspartate. Biochemistry 52: 456-465.
26. Unden, G., and Bongaerts, J. (1997) Alternative respiratory pathways of Escherichia coli: energetics and transcriptional regulation in response to electron acceptors. Biochim Biophys Acta 1320: 217-234.
27. 2 sensing. Dalton Trans 42: 3082-3087.
28. Wieland, K.P., Wieland, B., and Götz, F. (1995) A promoter-screening plasmid and xylose-inducible, glucose-repressible expression vectors for Staphylococcus carnosus. Gene 158: 91-96.
29. Williams, S.B., and Stewart, V. (1997) Discrimination between structurally related ligands nitrate and nitrite controls autokinase activity of the NarX transmembrane signal transducer of Escherichia coli K-12. Mol Microbiol 26: 911-925.
30. Witan, J., Monzel, C., Scheu, P.D., and Unden, G. (2012) The sensor kinase DcuS of Escherichia coli: two stimulus input sites and a merged signal pathway in the DctA/DcuS sensor unit. Biol Chem 393: 1291-1297.
31. Yanisch-Perron, C., Vieira, J., and Messing, J. (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33: 103-119.