-
1
-
-
0035400226
-
Some insights into protein structural class prediction
-
G.P. Zhou, and N. Assa-Munt Some insights into protein structural class prediction Proteins 44 2001 57 59
-
(2001)
Proteins
, vol.44
, pp. 57-59
-
-
Zhou, G.P.1
Assa-Munt, N.2
-
2
-
-
33748415440
-
Prediction of structural classes for protein sequences and domains-Impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
-
L.A. Kurgan, and L. Homaeian Prediction of structural classes for protein sequences and domains-Impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy Pattern Recognit. 39 2006 2323 2343
-
(2006)
Pattern Recognit.
, vol.39
, pp. 2323-2343
-
-
Kurgan, L.A.1
Homaeian, L.2
-
3
-
-
26844545834
-
Progress in protein structural class prediction and its impact to bioinformatics and proteomics
-
K.C. Chou Progress in protein structural class prediction and its impact to bioinformatics and proteomics Curr. Protein Pept. Sci. 6 2005 423 436
-
(2005)
Curr. Protein Pept. Sci.
, vol.6
, pp. 423-436
-
-
Chou, K.C.1
-
4
-
-
44349134514
-
SCPRED: Accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences
-
L. Kurgan, K. Cios, and K. Chen SCPRED: accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences BMC Bioinform. 9 2008 226
-
(2008)
BMC Bioinform.
, vol.9
, pp. 226
-
-
Kurgan, L.1
Cios, K.2
Chen, K.3
-
5
-
-
75149123557
-
Modular prediction of protein structural classes from sequences of twilight-zone identity with predicting sequences
-
M.J. Mizianty, and L. Kurgan Modular prediction of protein structural classes from sequences of twilight-zone identity with predicting sequences BMC Bioinform. 10 2009 414
-
(2009)
BMC Bioinform.
, vol.10
, pp. 414
-
-
Mizianty, M.J.1
Kurgan, L.2
-
6
-
-
76649141763
-
Prediction of protein structural classes for low-homology sequences based on predicted secondary structure
-
J. Yang, Z. Peng, and X. Chen Prediction of protein structural classes for low-homology sequences based on predicted secondary structure BMC Bioinform. 11 2010 S9
-
(2010)
BMC Bioinform.
, vol.11
, pp. 9
-
-
Yang, J.1
Peng, Z.2
Chen, X.3
-
7
-
-
77956623830
-
A high-accuracy protein structural class prediction algorithm using predicted secondary structural information
-
T. Liu, and C. Jia A high-accuracy protein structural class prediction algorithm using predicted secondary structural information J. Theor. Biol. 267 2010 272 275
-
(2010)
J. Theor. Biol.
, vol.267
, pp. 272-275
-
-
Liu, T.1
Jia, C.2
-
8
-
-
62549159517
-
Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
-
J.Y. Yang, Z.L. Peng, Z.G. Yu, R.J. Zhang, V. Anh, and D.S. Wang Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation J. Theor. Biol. 257 2009 618 626
-
(2009)
J. Theor. Biol.
, vol.257
, pp. 618-626
-
-
Yang, J.Y.1
Peng, Z.L.2
Yu, Z.G.3
Zhang, R.J.4
Anh, V.5
Wang, D.S.6
-
9
-
-
79952312701
-
A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM
-
K. Kavousi, B. Moshiri, and M. Sadeghi et al. A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM Comput. Biol. Chem. 1 2011 1 9
-
(2011)
Comput. Biol. Chem.
, vol.1
, pp. 1-9
-
-
Kavousi, K.1
Moshiri, B.2
Sadeghi, M.3
-
10
-
-
77957124553
-
Prediction of protein structural class for low-similarity sequences using support vector machine and PSI-BLAST profile
-
T.G. Liu, X. Zheng, and J. Wang Prediction of protein structural class for low-similarity sequences using support vector machine and PSI-BLAST profile Biochimie 92 2010 1330 1334
-
(2010)
Biochimie
, vol.92
, pp. 1330-1334
-
-
Liu, T.G.1
Zheng, X.2
Wang, J.3
-
11
-
-
46449128812
-
Prediction of protein structural class using novel evolutionary collocation-based sequence representation
-
K. Chen, L.A. Kurgan, and J.S. Ruan Prediction of protein structural class using novel evolutionary collocation-based sequence representation J. Comput. Chem. 29 2008 1596 1604
-
(2008)
J. Comput. Chem.
, vol.29
, pp. 1596-1604
-
-
Chen, K.1
Kurgan, L.A.2
Ruan, J.S.3
-
12
-
-
84865383117
-
Using principal component analysis and support vector machine to predict protein structural class for low-similarity sequences via PSSM
-
S.L. Zhang, Y. Feng, and X.G. Yuan Using principal component analysis and support vector machine to predict protein structural class for low-similarity sequences via PSSM J. Biomol. Struct. Dyn. 29 2012 634 642
-
(2012)
J. Biomol. Struct. Dyn.
, vol.29
, pp. 634-642
-
-
Zhang, S.L.1
Feng, Y.2
Yuan, X.G.3
-
13
-
-
84862763274
-
Accurate prediction of protein structural class using auto covariance transformation of PSI-BLAST profiles
-
T. Liu, X. Geng, and X. Zheng et al. Accurate prediction of protein structural class using auto covariance transformation of PSI-BLAST profiles Amino Acids 42 2012 2243 2249
-
(2012)
Amino Acids
, vol.42
, pp. 2243-2249
-
-
Liu, T.1
Geng, X.2
Zheng, X.3
-
14
-
-
0034141493
-
How good is prediction of protein structural class by the component-coupled method?
-
Z.X. Wang, and Z. Yuan How good is prediction of protein structural class by the component-coupled method? Proteins 38 2000 165 175
-
(2000)
Proteins
, vol.38
, pp. 165-175
-
-
Wang, Z.X.1
Yuan, Z.2
-
15
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
D.T. Jones Protein secondary structure prediction based on position-specific scoring matrices J. Mol. Biol. 292 1999 195 202
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 195-202
-
-
Jones, D.T.1
-
16
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S.F. Altschul, T.L. Madden, and A.A. Schaffer et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
-
17
-
-
84862812419
-
A novel protein structural classes prediction method based on predicted secondary structure
-
S.Y. Ding, S.L. Zhang, Y. Li, and T.M. Wang A novel protein structural classes prediction method based on predicted secondary structure Biochimie 94 2012 1166 1171
-
(2012)
Biochimie
, vol.94
, pp. 1166-1171
-
-
Ding, S.Y.1
Zhang, S.L.2
Li, Y.3
Wang, T.M.4
-
18
-
-
1042268067
-
Prediction of protein relative solvent accessibility with support vector machines and long-range interaction 3D local descriptor
-
H. Kim, and H. Park Prediction of protein relative solvent accessibility with support vector machines and long-range interaction 3D local descriptor Proteins 54 2004 557 562
-
(2004)
Proteins
, vol.54
, pp. 557-562
-
-
Kim, H.1
Park, H.2
-
19
-
-
0038451355
-
Reduction of protein sequence complexity by residue grouping
-
T. Li, K. Fan, J. Wang, and W. Wang Reduction of protein sequence complexity by residue grouping J. Protein Eng. 16 2003 323 330
-
(2003)
J. Protein Eng.
, vol.16
, pp. 323-330
-
-
Li, T.1
Fan, K.2
Wang, J.3
Wang, W.4
-
21
-
-
0034843744
-
Support vector machine approach for protein subcellular localization prediction
-
S. Hua, and Z. Sun Support vector machine approach for protein subcellular localization prediction Bioinformatics 17 2001 721 728
-
(2001)
Bioinformatics
, vol.17
, pp. 721-728
-
-
Hua, S.1
Sun, Z.2
-
24
-
-
84891875737
-
-
http://www.csie.ntu.edu.tw/wcjlin/libsvm.
-
-
-
-
26
-
-
0033977581
-
The ASTRAL compendium for sequence and structure analysis
-
S. Brenner, P. Koehl, and M. Levitt The ASTRAL compendium for sequence and structure analysis Nucleic Acids Res. 28 2000 254 256
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 254-256
-
-
Brenner, S.1
Koehl, P.2
Levitt, M.3
|