메뉴 건너뛰기




Volumn 8, Issue 12, 2013, Pages

Knowledge and theme discovery across very large biological data sets using distributed queries: A prototype combining unstructured and structured data

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER MODEL; CONCEPTUAL FRAMEWORK; DATA ANALYSIS; DATA ANALYSIS SOFTWARE; DATA COLLECTION METHOD; DATA MINING; DATA PROCESSING; GENE EXPRESSION; HIGH THROUGHPUT SCREENING; INFORMATION PROCESSING DEVICE; MALIGNANT NEOPLASTIC DISEASE; MEDICAL LITERATURE; MEDICAL RESEARCH; NOMENCLATURE; PERFORMANCE MEASUREMENT SYSTEM; PROCESS CONTROL; PROCESS DESIGN; PROCESS DEVELOPMENT; PROCESS MODEL; PROCESS TECHNOLOGY; STRUCTURED DATA; UNSTRUCTURED DATA;

EID: 84891759921     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0080503     Document Type: Article
Times cited : (14)

References (25)
  • 1
    • 84874229740 scopus 로고    scopus 로고
    • The 2013 Nucleic Acids Research Database Issue and the online molecular biology database collection
    • Fernandez-Suarez XM, Galperin MY (2013) The 2013 Nucleic Acids Research Database Issue and the online molecular biology database collection. Nucleic Acids Res 41: D1-7.
    • (2013) Nucleic Acids Res , vol.41
    • Fernandez-Suarez, X.M.1    Galperin, M.Y.2
  • 4
    • 84855410433 scopus 로고    scopus 로고
    • BioMart: A data federation framework for large collaborative projects
    • Oxford
    • Zhang J, Haider S, Baran J, Cros A, Guberman JM, et al. (2011) BioMart: a data federation framework for large collaborative projects. Database (Oxford) 2011: bar038.
    • (2011) Database , vol.2011
    • Zhang, J.1    Haider, S.2    Baran, J.3    Cros, A.4    Guberman, J.M.5
  • 5
    • 84858314394 scopus 로고    scopus 로고
    • BioMart: Driving a paradigm change in biological data management
    • Oxford
    • Kasprzyk A (2011) BioMart: driving a paradigm change in biological data management. Database (Oxford) 2011: bar049.
    • (2011) Database , vol.2011
    • Kasprzyk, A.1
  • 7
    • 84856717649 scopus 로고    scopus 로고
    • Google Flu Trends: Correlation with emergency department influenza rates and crowding metrics
    • Dugas AF, Hsieh YH, Levin SR, Pines JM, Mareiniss DP, et al. (2012) Google Flu Trends: correlation with emergency department influenza rates and crowding metrics. Clin Infect Dis 54: 463-469.
    • (2012) Clin Infect Dis , vol.54 , pp. 463-469
    • Dugas, A.F.1    Hsieh, Y.H.2    Levin, S.R.3    Pines, J.M.4    Mareiniss, D.P.5
  • 9
    • 78650811522 scopus 로고    scopus 로고
    • An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics
    • Taylor RC (2010) An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics. BMC Bioinformatics 11 Suppl 12: S1.
    • (2010) BMC Bioinformatics , vol.11 , Issue.SUPPL. 12
    • Taylor, R.C.1
  • 12
    • 0035042776 scopus 로고    scopus 로고
    • A literature network of human genes for high-throughput analysis of gene expression
    • Jenssen TK, Laegreid A, Komorowski J, Hovig E (2001) A literature network of human genes for high-throughput analysis of gene expression. Nat Genet 28: 21-28.
    • (2001) Nat Genet , vol.28 , pp. 21-28
    • Jenssen, T.K.1    Laegreid, A.2    Komorowski, J.3    Hovig, E.4
  • 13
    • 34848893347 scopus 로고    scopus 로고
    • Using online databases to find peer-reviewed journal articles on injury prevention and safety promotion research: A study of textword queries by SafetyLit users
    • Lawrence DW (2007) Using online databases to find peer-reviewed journal articles on injury prevention and safety promotion research: a study of textword queries by SafetyLit users. Inj Prev 13: 232-236.
    • (2007) Inj Prev , vol.13 , pp. 232-236
    • Lawrence, D.W.1
  • 14
    • 84879324220 scopus 로고    scopus 로고
    • GO2PUB: Querying PubMed with semantic expansion of gene ontology terms
    • Bettembourg C, Diot C, Burgun A, Dameron O (2012) GO2PUB: Querying PubMed with semantic expansion of gene ontology terms. J Biomed Semantics 3: 7.
    • (2012) J Biomed Semantics , vol.3 , pp. 7
    • Bettembourg, C.1    Diot, C.2    Burgun, A.3    Dameron, O.4
  • 16
    • 33748192576 scopus 로고    scopus 로고
    • Text mining of full-text journal articles combined with gene expression analysis reveals a relationship between sphingosine-1-phosphate and invasiveness of a glioblastoma cell line
    • Natarajan J, Berrar D, Dubitzky W, Hack C, Zhang Y, et al. (2006) Text mining of full-text journal articles combined with gene expression analysis reveals a relationship between sphingosine-1-phosphate and invasiveness of a glioblastoma cell line. BMC Bioinformatics 7: 373.
    • (2006) BMC Bioinformatics , vol.7 , pp. 373
    • Natarajan, J.1    Berrar, D.2    Dubitzky, W.3    Hack, C.4    Zhang, Y.5
  • 18
    • 79957895842 scopus 로고    scopus 로고
    • CloudAligner: A fast and full-featured MapReduce based tool for sequence mapping
    • Nguyen T, Shi W, Ruden D (2011) CloudAligner: A fast and full-featured MapReduce based tool for sequence mapping. BMC Res Notes 4: 171.
    • (2011) BMC Res Notes , vol.4 , pp. 171
    • Nguyen, T.1    Shi, W.2    Ruden, D.3
  • 19
    • 65649120715 scopus 로고    scopus 로고
    • CloudBurst: Highly sensitive read mapping with MapReduce
    • Schatz MC (2009) CloudBurst: highly sensitive read mapping with MapReduce. Bioinformatics 25: 1363-1369.
    • (2009) Bioinformatics , vol.25 , pp. 1363-1369
    • Schatz, M.C.1
  • 24
    • 14044254746 scopus 로고    scopus 로고
    • Textpresso: An ontology-based information retrieval and extraction system for biological literature
    • Muller HM, Kenny EE, Sternberg PW (2004) Textpresso: an ontology-based information retrieval and extraction system for biological literature. PLoS Biol 2: e309.
    • (2004) PLoS Biol , vol.2
    • Muller, H.M.1    Kenny, E.E.2    Sternberg, P.W.3
  • 25
    • 84869181977 scopus 로고    scopus 로고
    • Molecular classification of gliomas based on whole genome gene expression: A systematic report of 225 samples from the Chinese Glioma Cooperative Group
    • Yan W, Zhang W, You G, Zhang J, Han L, et al. (2012) Molecular classification of gliomas based on whole genome gene expression: a systematic report of 225 samples from the Chinese Glioma Cooperative Group. Neuro Oncol 14: 1432-1440.
    • (2012) Neuro Oncol , vol.14 , pp. 1432-1440
    • Yan, W.1    Zhang, W.2    You, G.3    Zhang, J.4    Han, L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.