-
1
-
-
0001175677
-
Mathematical modelling of tumour invasion and metastasis
-
Anderson, A. R. A., Chaplain, M. A. J., Newman, E. L., Steele, R. J. C., and Thompson, A. M. (2000). Mathematical modelling of tumour invasion and metastasis. Comput. Math. Methods Med. 2, 129-154.
-
(2000)
Comput. Math. Methods Med.
, vol.2
, pp. 129-154
-
-
Anderson, A.R.A.1
Chaplain, M.A.J.2
Newman, E.L.3
Steele, R.J.C.4
Thompson, A.M.5
-
2
-
-
3843079723
-
A history of the study of solid tumour growth: the contribution of mathematical modelling
-
Araujo, R. P., and McElwain, D. L. S. (2004). A history of the study of solid tumour growth: the contribution of mathematical modelling. Bull. Math. Biol. 66, 1039-1091.
-
(2004)
Bull. Math. Biol.
, vol.66
, pp. 1039-1091
-
-
Araujo, R.P.1
McElwain, D.L.S.2
-
3
-
-
0013916715
-
Rate of growth of solid tumours as a problem of diffusion
-
Burton, A. C. (1966). Rate of growth of solid tumours as a problem of diffusion. Growth 30, 157-176.
-
(1966)
Growth
, vol.30
, pp. 157-176
-
-
Burton, A.C.1
-
4
-
-
0031985228
-
The TIMP2 membrane type 1 metalloproteinase "receptor" regulates the concentration and efficient activation of progelatinase A: a kinetic study
-
Butler, G. S., Butler, M. J., Atkinson, S. J., Will, H., Tamura, T., Schade van Westrum, S., et al. (1998). The TIMP2 membrane type 1 metalloproteinase "receptor" regulates the concentration and efficient activation of progelatinase A: a kinetic study. J. Biol. Chem. 273, 871-880.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 871-880
-
-
Butler, G.S.1
Butler, M.J.2
Atkinson, S.J.3
Will, H.4
Tamura, T.5
Schade van Westrum, S.6
-
5
-
-
80052344220
-
Diffusion of MMPs on the surface of collagen fibrils: the mobile cell surface-collagen substratum interface
-
doi:10.1371/journal.pone.0024029
-
Collier, I. E., Legant, W., Marmer, B., Lubman, O., Saffarian, S., Wakatsuki, T., et al. (2011). Diffusion of MMPs on the surface of collagen fibrils: the mobile cell surface-collagen substratum interface. PLoS ONE 6:e24029. doi:10.1371/journal.pone.0024029
-
(2011)
PLoS ONE
, vol.6
-
-
Collier, I.E.1
Legant, W.2
Marmer, B.3
Lubman, O.4
Saffarian, S.5
Wakatsuki, T.6
-
6
-
-
80053190203
-
Robustness analysis and behavior discrimination in enzymatic reaction networks
-
doi:10.1371/journal.pone.0024246
-
Donzé, A., Fanchon, E., Gattepaille, L. M., Maler, O., and Tracqui, P. (2011). Robustness analysis and behavior discrimination in enzymatic reaction networks. PLoS ONE 6:e24246. doi:10.1371/journal.pone.0024246
-
(2011)
PLoS ONE
, vol.6
-
-
Donzé, A.1
Fanchon, E.2
Gattepaille, L.M.3
Maler, O.4
Tracqui, P.5
-
7
-
-
6844250127
-
Membrane-type matrix metalloproteinases 1 and 2 exhibit broad-spectrum proteolytic capacities comparable to many matrix metalloproteinases
-
d'Ortho, M. P., Will, H., Atkinson, S., Butler, G., Messent, A., Gavrilovic, J., et al. (1997). Membrane-type matrix metalloproteinases 1 and 2 exhibit broad-spectrum proteolytic capacities comparable to many matrix metalloproteinases. Eur. J. Biochem. 250, 751.
-
(1997)
Eur. J. Biochem.
, vol.250
, pp. 751
-
-
d'Ortho, M.P.1
Will, H.2
Atkinson, S.3
Butler, G.4
Messent, A.5
Gavrilovic, J.6
-
8
-
-
0035834666
-
Characterization of the role of the 'MT-loop': an eight-amino acid insertion specific to progelatinase A (MMP2) activating membrane-type matrix metalloproteinases
-
English, W. R., Holtz, B., Vogt, G., Knauper, V., and Murphy, G. (2001). Characterization of the role of the "MT-loop": an eight-amino acid insertion specific to progelatinase A (MMP2) activating membrane-type matrix metalloproteinases. J. Biol. Chem. 276, 42018-42026.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 42018-42026
-
-
English, W.R.1
Holtz, B.2
Vogt, G.3
Knauper, V.4
Murphy, G.5
-
9
-
-
1542495339
-
Proteolytic and non-proteolytic migration of tumour cells and leucocytes
-
Friedl, P., and Wolf, K. (2003). Proteolytic and non-proteolytic migration of tumour cells and leucocytes. Biochem. Soc. Symp. 70, 277-285.
-
(2003)
Biochem. Soc. Symp.
, vol.70
, pp. 277-285
-
-
Friedl, P.1
Wolf, K.2
-
10
-
-
38649104788
-
Mathematical modelling of cancer cell invasion of tissue: local and non-local models and the effect of adhesion
-
Gerisch, A., and Chaplain, M. A. (2008). Mathematical modelling of cancer cell invasion of tissue: local and non-local models and the effect of adhesion. J. Theor. Biol. 250, 684-704.
-
(2008)
J. Theor. Biol.
, vol.250
, pp. 684-704
-
-
Gerisch, A.1
Chaplain, M.A.2
-
11
-
-
0034614637
-
The hallmarks of cancer
-
Hanahan, D., and Weinberg, R. A. (2000). The hallmarks of cancer. Cell 100, 57-70.
-
(2000)
Cell
, vol.100
, pp. 57-70
-
-
Hanahan, D.1
Weinberg, R.A.2
-
12
-
-
79952284127
-
Hallmarks of cancer: the next generation
-
Hanahan, D., and Weinberg, R. A. (2011). Hallmarks of cancer: the next generation. Cell 144, 646-674.
-
(2011)
Cell
, vol.144
, pp. 646-674
-
-
Hanahan, D.1
Weinberg, R.A.2
-
13
-
-
84861167206
-
Establishment and validation of computational model for MT1-MMP dependent ECM degradation and intervention strategies
-
doi:10.1371/journal.pcbi.1002479
-
Hoshino, D., Koshikawa, N., Suzuki, T., Quaranta, V., Weaver, A. M., Seiki, M., et al. (2012). Establishment and validation of computational model for MT1-MMP dependent ECM degradation and intervention strategies. PLoS Comput. Biol. 8:e1002479. doi:10.1371/journal.pcbi.1002479
-
(2012)
PLoS Comput. Biol.
, vol.8
-
-
Hoshino, D.1
Koshikawa, N.2
Suzuki, T.3
Quaranta, V.4
Weaver, A.M.5
Seiki, M.6
-
14
-
-
0035022861
-
A-Cell: graphical user interface for the construction of biochemical reaction models
-
Ichikawa, K. (2001). A-Cell: graphical user interface for the construction of biochemical reaction models. Bioinformatics 17, 483-484.
-
(2001)
Bioinformatics
, vol.17
, pp. 483-484
-
-
Ichikawa, K.1
-
15
-
-
4644236059
-
A theoretical model of type I collagen proteolysis by matrix metalloproteinase (MMP) 2 and membrane type 1 MMP in the presence of tissue inhibitor of metalloproteinase 2
-
Karagiannis, E. D., and Popel, A. S. (2004). A theoretical model of type I collagen proteolysis by matrix metalloproteinase (MMP) 2 and membrane type 1 MMP in the presence of tissue inhibitor of metalloproteinase 2. J. Biol. Chem. 279, 39105-39114.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 39105-39114
-
-
Karagiannis, E.D.1
Popel, A.S.2
-
16
-
-
28444488632
-
Distinct modes of collagen type I proteolysis by matrix metalloproteinase (MMP) 2 and membrane type I MMP during the migration of a tip endothelial cell: insights from a computational model
-
Karagiannis, E. D., and Popel, A. S. (2006). Distinct modes of collagen type I proteolysis by matrix metalloproteinase (MMP) 2 and membrane type I MMP during the migration of a tip endothelial cell: insights from a computational model. J. Theor. Biol. 238, 124-145.
-
(2006)
J. Theor. Biol.
, vol.238
, pp. 124-145
-
-
Karagiannis, E.D.1
Popel, A.S.2
-
17
-
-
77950931419
-
Matrix metalloproteinases: regulators of the tumor microenvironment
-
Kessenbrock, K., Plaks, V., and Werb, Z. (2010). Matrix metalloproteinases: regulators of the tumor microenvironment. Cell 141, 52-67.
-
(2010)
Cell
, vol.141
, pp. 52-67
-
-
Kessenbrock, K.1
Plaks, V.2
Werb, Z.3
-
18
-
-
0029977810
-
MT-MMP, the cell surface activator of proMMP-2 (pro-gelatinase A), is expressed with its substrate in mouse tissue during embryogenesis
-
Kinoh, H., Sato, H., Tsunezuka, Y., Takino, T., Kawashima, A., Okada, Y., et al. (1996). MT-MMP, the cell surface activator of proMMP-2 (pro-gelatinase A), is expressed with its substrate in mouse tissue during embryogenesis. J. Cell. Sci. 109, 953-959.
-
(1996)
J. Cell. Sci.
, vol.109
, pp. 953-959
-
-
Kinoh, H.1
Sato, H.2
Tsunezuka, Y.3
Takino, T.4
Kawashima, A.5
Okada, Y.6
-
20
-
-
0142169378
-
Selective involvement of TIMP-2 in the second activational cleavage of pro-MMP-2: refinement of the pro-MMP-2 activation mechanism
-
Lafleur, M. A., Tester, A. M., and Thompson, E. W. (2003). Selective involvement of TIMP-2 in the second activational cleavage of pro-MMP-2: refinement of the pro-MMP-2 activation mechanism. FEBS Lett. 553, 457-463.
-
(2003)
FEBS Lett.
, vol.553
, pp. 457-463
-
-
Lafleur, M.A.1
Tester, A.M.2
Thompson, E.W.3
-
21
-
-
54049102110
-
Molecular dissection of the structural machinery underlying the tissue-invasive activity of membrane type-1 matrix metalloproteinase
-
Li, X. Y., Ota, I., Yana, I., Sabeh, F., and Weiss, S. J. (2008). Molecular dissection of the structural machinery underlying the tissue-invasive activity of membrane type-1 matrix metalloproteinase. Mol. Biol. Cell 19, 3221-3233.
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 3221-3233
-
-
Li, X.Y.1
Ota, I.2
Yana, I.3
Sabeh, F.4
Weiss, S.J.5
-
22
-
-
0036302814
-
Protease degradomics: a new challenge for proteomics
-
López-Otín, C., and Overall, C. M. (2002). Protease degradomics: a new challenge for proteomics. Nat. Rev. Mol. Cell Biol. 3, 509-519.
-
(2002)
Nat. Rev. Mol. Cell Biol.
, vol.3
, pp. 509-519
-
-
López-Otín, C.1
Overall, C.M.2
-
23
-
-
76149128357
-
Nonlinear modelling of cancer: bridging the gap between cells and tumours
-
Lowengrub, J. S., Frieboes, H. B., Jin, F., Chuang, Y. L., Li, X., Macklin, P., et al. (2010). Nonlinear modelling of cancer: bridging the gap between cells and tumours. Nonlinearity 23, R1-R9.
-
(2010)
Nonlinearity
, vol.23
-
-
Lowengrub, J.S.1
Frieboes, H.B.2
Jin, F.3
Chuang, Y.L.4
Li, X.5
Macklin, P.6
-
24
-
-
69449084464
-
Increased invasive behaviour in cutaneous squamous cell carcinoma with loss of basement-membrane type VII collagen
-
Martins, V. L., Vyas, J. J., Chen, M., Purdie, K., Mein, C. A., South, A. P., et al. (2009). Increased invasive behaviour in cutaneous squamous cell carcinoma with loss of basement-membrane type VII collagen. J. Cell. Sci. 122(Pt 11), 1788-1799.
-
(2009)
J. Cell. Sci.
, vol.122
, Issue.PART 11
, pp. 1788-1799
-
-
Martins, V.L.1
Vyas, J.J.2
Chen, M.3
Purdie, K.4
Mein, C.A.5
South, A.P.6
-
25
-
-
0033618337
-
Matrix metalloproteinases
-
Nagase, H., and Woessner, J. F. (1999). Matrix metalloproteinases. J. Biol. Chem. 274, 21491-21494.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 21491-21494
-
-
Nagase, H.1
Woessner, J.F.2
-
26
-
-
55349094310
-
Activation of matrix metalloproteinase-2 (MMP-2) by membrane type 1 matrix metalloproteinase through an artificial receptor for proMMP-2 generates active MMP-2
-
Nishida, Y., Miyamori, H., Thompson, E. W., Takino, T., Endo, Y., and Sato, H. (2008). Activation of matrix metalloproteinase-2 (MMP-2) by membrane type 1 matrix metalloproteinase through an artificial receptor for proMMP-2 generates active MMP-2. Cancer Res. 68, 9096-9104.
-
(2008)
Cancer Res.
, vol.68
, pp. 9096-9104
-
-
Nishida, Y.1
Miyamori, H.2
Thompson, E.W.3
Takino, T.4
Endo, Y.5
Sato, H.6
-
27
-
-
84866143444
-
New and paradoxical roles of matrix metalloproteinases in the tumor microenvironment
-
doi:10.3389/fphar.2012.00140
-
Nöel, A., Gutiérrez-Fernández, A., Sounni, N. E., Behrendt, N., Maquoi, E., Lund, I. K., et al. (2012). New and paradoxical roles of matrix metalloproteinases in the tumor microenvironment. Front. Pharmacol. 3:140. doi:10.3389/fphar.2012.00140
-
(2012)
Front. Pharmacol.
, vol.3
, pp. 140
-
-
Nöel, A.1
Gutiérrez-Fernández, A.2
Sounni, N.E.3
Behrendt, N.4
Maquoi, E.5
Lund, I.K.6
-
28
-
-
14944357291
-
Development of a quantitative method to analyse tumour cell invasion in organotypic culture
-
Nyström, M. L., Thomas, G. J., Stone, M., Mackenzie, I. C., Hart, I. R., and Marshall, J. F. (2005). Development of a quantitative method to analyse tumour cell invasion in organotypic culture. J. Pathol. 205, 468-475.
-
(2005)
J. Pathol.
, vol.205
, pp. 468-475
-
-
Nyström, M.L.1
Thomas, G.J.2
Stone, M.3
Mackenzie, I.C.4
Hart, I.R.5
Marshall, J.F.6
-
29
-
-
44149123099
-
Collagen density promotes mammary tumor initiation and progression
-
doi:10.1186/1741-7015-6-11
-
Provenzano, P. P., Inman, D. R., Eliceiri, K. W., Knittel, J. G., Yan, L., Rueden, C. T., et al. (2008). Collagen density promotes mammary tumor initiation and progression. BMC Med. 6:11. doi:10.1186/1741-7015-6-11
-
(2008)
BMC Med.
, vol.6
, pp. 11
-
-
Provenzano, P.P.1
Inman, D.R.2
Eliceiri, K.W.3
Knittel, J.G.4
Yan, L.5
Rueden, C.T.6
-
30
-
-
77951636153
-
Current trends in mathematical modeling of tumor-microenvironment interactions: a survey of tools and applications
-
Rejniak, K. A., and McCawley, L. J. (2010). Current trends in mathematical modeling of tumor-microenvironment interactions: a survey of tools and applications. Exp. Biol. Med. (Maywood) 235, 411-423.
-
(2010)
Exp. Biol. Med. (Maywood)
, vol.235
, pp. 411-423
-
-
Rejniak, K.A.1
McCawley, L.J.2
-
31
-
-
70350233406
-
Navigating ECM barriers at the invasive front: the cancer cell-stroma interface
-
Rowe, R. G., and Weiss, S. J. (2009). Navigating ECM barriers at the invasive front: the cancer cell-stroma interface. Annu. Rev. Cell Dev. Biol. 25, 567-595.
-
(2009)
Annu. Rev. Cell Dev. Biol.
, vol.25
, pp. 567-595
-
-
Rowe, R.G.1
Weiss, S.J.2
-
32
-
-
65249155429
-
Protease-dependent versus-independent cancer cell invasion programs: three-dimensional amoeboid movement revisited
-
Sabeh, F., Shimizu-Hirota, R., and Weiss, S. J. (2009). Protease-dependent versus-independent cancer cell invasion programs: three-dimensional amoeboid movement revisited. J. Cell Biol. 185, 11-19.
-
(2009)
J. Cell Biol.
, vol.185
, pp. 11-19
-
-
Sabeh, F.1
Shimizu-Hirota, R.2
Weiss, S.J.3
-
33
-
-
12344252751
-
Mechanisms of cancer cell invasion
-
Sahai, E. (2005). Mechanisms of cancer cell invasion. Curr. Opin. Genet. Dev. 15, 87-96.
-
(2005)
Curr. Opin. Genet. Dev.
, vol.15
, pp. 87-96
-
-
Sahai, E.1
-
34
-
-
0028907318
-
Mechanism of cell surface activation of 72-kDa type IV collagenase
-
Strongin, A. Y., Collier, I., Bannikov, G., Marmer, B. L., Grant, G. A., and Goldberg, G. I. (1995). Mechanism of cell surface activation of 72-kDa type IV collagenase. J. Biol. Chem. 270, 5331-5338.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 5331-5338
-
-
Strongin, A.Y.1
Collier, I.2
Bannikov, G.3
Marmer, B.L.4
Grant, G.A.5
Goldberg, G.I.6
-
35
-
-
5744251586
-
Characterization of the distinct collagen binding, helicase and cleavage mechanisms of matrix metalloproteinase 2 and 14 (gelatinase A and MT1-MMP): the differential roles of the MMP hemopexin c domains and the MMP-2 fibronectin type II modules in collagen triple helicase activities
-
Tam, E. M., Moore, T. R., Butler, G. S., and Overall, C. M. (2004). Characterization of the distinct collagen binding, helicase and cleavage mechanisms of matrix metalloproteinase 2 and 14 (gelatinase A and MT1-MMP): the differential roles of the MMP hemopexin c domains and the MMP-2 fibronectin type II modules in collagen triple helicase activities. J. Biol. Chem. 279, 43336-43344.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 43336-43344
-
-
Tam, E.M.1
Moore, T.R.2
Butler, G.S.3
Overall, C.M.4
-
36
-
-
84966192535
-
The histological structure of some human lung cancers and the possible implications for radiotherapy
-
Thomlinson, R. H., and Gray, L. H. (1955). The histological structure of some human lung cancers and the possible implications for radiotherapy. Br. J. Cancer 9, 539-549.
-
(1955)
Br. J. Cancer
, vol.9
, pp. 539-549
-
-
Thomlinson, R.H.1
Gray, L.H.2
-
37
-
-
0034731479
-
Tissue inhibitor of metalloproteinase (TIMP)-2 acts synergistically with synthetic matrix metalloproteinase (MMP) inhibitors but not with TIMP-4 to enhance the (Membrane type 1)-MMP-dependent activation of pro-MMP-2
-
Toth, M., Bernardo, M. M., Gervasi, D. C., Soloway, P. D., Wang, Z., Bigg, H. F., et al. (2000). Tissue inhibitor of metalloproteinase (TIMP)-2 acts synergistically with synthetic matrix metalloproteinase (MMP) inhibitors but not with TIMP-4 to enhance the (Membrane type 1)-MMP-dependent activation of pro-MMP-2. J. Biol. Chem. 275, 41415-41423.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 41415-41423
-
-
Toth, M.1
Bernardo, M.M.2
Gervasi, D.C.3
Soloway, P.D.4
Wang, Z.5
Bigg, H.F.6
-
38
-
-
84876372443
-
A multiscale moving boundary model arising in cancer invasion
-
Trucu, D., Lin, P., Chaplain, M., and Wang, Y. (2013). A multiscale moving boundary model arising in cancer invasion. Multiscale Model. Simul. 11, 309-335.
-
(2013)
Multiscale Model. Simul.
, vol.11
, pp. 309-335
-
-
Trucu, D.1
Lin, P.2
Chaplain, M.3
Wang, Y.4
-
39
-
-
0142117232
-
Use of plasma MMP-2 and MMP-9 levels as a surrogate for tumour expression in colorectal cancer patients
-
Tutton, M. G., George, M. L., Eccles, S. A., Burton, S., Swift, R. I., and Abulafi, A. M. (2003). Use of plasma MMP-2 and MMP-9 levels as a surrogate for tumour expression in colorectal cancer patients. Int. J. Cancer 107, 541-550.
-
(2003)
Int. J. Cancer
, vol.107
, pp. 541-550
-
-
Tutton, M.G.1
George, M.L.2
Eccles, S.A.3
Burton, S.4
Swift, R.I.5
Abulafi, A.M.6
-
40
-
-
0030715322
-
ECM and cell surface proteolysis: regulating cellular ecology
-
Werb, Z. (1997). ECM and cell surface proteolysis: regulating cellular ecology. Cell 91, 439-442.
-
(1997)
Cell
, vol.91
, pp. 439-442
-
-
Werb, Z.1
-
41
-
-
70449133451
-
Collagen-based cell migration models in vitro and in vivo
-
Wolf, K., Alexander, S., Schacht, V., Coussens, L. M., von Andrian, U. H., van Rheenen, J., et al. (2009). Collagen-based cell migration models in vitro and in vivo. Semin. Cell Dev. Biol. 20, 931-941.
-
(2009)
Semin. Cell Dev. Biol.
, vol.20
, pp. 931-941
-
-
Wolf, K.1
Alexander, S.2
Schacht, V.3
Coussens, L.M.4
von Andrian, U.H.5
van Rheenen, J.6
-
42
-
-
84874965736
-
Resistance of corneal RFUVA-cross-linked collagens and small leucine-rich proteoglycans to degradation by matrix metalloproteinases
-
Zhang, Y., Mao, X., Schwend, T., Littlechild, S., and Conrad, G. W. (2013). Resistance of corneal RFUVA-cross-linked collagens and small leucine-rich proteoglycans to degradation by matrix metalloproteinases. Invest. Ophthalmol. Vis. Sci. 54, 1014-1025.
-
(2013)
Invest. Ophthalmol. Vis. Sci.
, vol.54
, pp. 1014-1025
-
-
Zhang, Y.1
Mao, X.2
Schwend, T.3
Littlechild, S.4
Conrad, G.W.5
-
43
-
-
0035138546
-
Collagen-induced proMMP-2 activation by MT1-MMP in human dermal fibroblasts and the possible role of alpha2beta1 integrins
-
Zigrino, P., Drescher, C., and Mauch, C. (2001). Collagen-induced proMMP-2 activation by MT1-MMP in human dermal fibroblasts and the possible role of alpha2beta1 integrins. Eur. J. Cell Biol. 80, 68-77.
-
(2001)
Eur. J. Cell Biol.
, vol.80
, pp. 68-77
-
-
Zigrino, P.1
Drescher, C.2
Mauch, C.3
|