-
1
-
-
0034705128
-
High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry
-
10.1073/pnas.090099097 1:CAS:528:DC%2BD3cXjvFaktL4%3D
-
Young, M.M.; Tang, N.; Hempel, J.C.; Oshiro, C.M.; Taylor, E.W.; Kuntz, I.D.; Gibson, B.W.; Dollinger, G.: High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry. Proc. Natl. Acad. Sci. U. S. A. 97, 5802-5806 (2000)
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 5802-5806
-
-
Young, M.M.1
Tang, N.2
Hempel, J.C.3
Oshiro, C.M.4
Taylor, E.W.5
Kuntz, I.D.6
Gibson, B.W.7
Dollinger, G.8
-
2
-
-
0042349690
-
Chemical cross-linking and mass spectrometry for protein structural modeling
-
10.1016/S0022-2836(03)00721-6 1:CAS:528:DC%2BD3sXlvVGqsLo%3D
-
Back, J.W.; de Jong, L.; Muijsers, A.O.; de Koster, C.G.: Chemical cross-linking and mass spectrometry for protein structural modeling. J. Mol. Biol. 331, 303-313 (2003)
-
(2003)
J. Mol. Biol.
, vol.331
, pp. 303-313
-
-
Back, J.W.1
De Jong, L.2
Muijsers, A.O.3
De Koster, C.G.4
-
3
-
-
77955865480
-
Elucidating the higher-order structure of biopolymers by structural probing and mass spectrometry: MS3D
-
10.1002/jms.1762 1:CAS:528:DC%2BC3cXhtV2rsLzK
-
Fabris, D.; Yu, E.T.: Elucidating the higher-order structure of biopolymers by structural probing and mass spectrometry: MS3D. J. Mass Spectrom. 45, 841-860 (2010)
-
(2010)
J. Mass Spectrom.
, vol.45
, pp. 841-860
-
-
Fabris, D.1
Yu, E.T.2
-
4
-
-
33745742438
-
Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions
-
10.1002/mas.20082 1:CAS:528:DC%2BD28XmslOqurs%3D
-
Sinz, A.: Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions. Mass Spectrom. Rev. 25, 663-682 (2006)
-
(2006)
Mass Spectrom. Rev.
, vol.25
, pp. 663-682
-
-
Sinz, A.1
-
5
-
-
77956058146
-
Investigation of protein-protein interactions in living cells by chemical crosslinking and mass spectrometry
-
10.1007/s00216-009-3405-5 1:CAS:528:DC%2BC3cXmt1eiug%3D%3D
-
Sinz, A.: Investigation of protein-protein interactions in living cells by chemical crosslinking and mass spectrometry. Anal. Bioanal. Chem. 397, 3433-3440 (2010)
-
(2010)
Anal. Bioanal. Chem.
, vol.397
, pp. 3433-3440
-
-
Sinz, A.1
-
6
-
-
47549096059
-
Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes
-
10.1039/b801810c 1:CAS:528:DC%2BD1cXosFGiu7w%3D
-
Lee, Y.J.: Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes. Mol. Biosyst. 4, 816-823 (2008)
-
(2008)
Mol. Biosyst.
, vol.4
, pp. 816-823
-
-
Lee, Y.J.1
-
7
-
-
63049119068
-
Identification of protein-protein interactions and topologies in living cells with chemical cross-linking and mass spectrometry
-
10.1074/mcp.M800232-MCP200 1:CAS:528:DC%2BD1MXjt12jt7s%3D
-
Zhang, H.Z.; Tang, X.T.; Munske, G.R.; Tolic, N.; Anderson, G.A.; Bruce, J.E.: Identification of protein-protein interactions and topologies in living cells with chemical cross-linking and mass spectrometry. Mol. Cell. Proteom. 8, 409-420 (2009)
-
(2009)
Mol. Cell. Proteom.
, vol.8
, pp. 409-420
-
-
Zhang, H.Z.1
Tang, X.T.2
Munske, G.R.3
Tolic, N.4
Anderson, G.A.5
Bruce, J.E.6
-
8
-
-
79851513173
-
The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modeling of proteins and multi-protein complexes
-
10.1016/j.jsb.2010.10.014 1:CAS:528:DC%2BC3MXhvFWntb0%3D
-
Rappsilber, J.: The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modeling of proteins and multi-protein complexes. J. Struct. Biol. 173, 530-540 (2011)
-
(2011)
J. Struct. Biol.
, vol.173
, pp. 530-540
-
-
Rappsilber, J.1
-
9
-
-
78149438179
-
Cross-linking combined with mass spectrometry for structural proteomics
-
10.1002/mas.20293 1:CAS:528:DC%2BC3cXhsFyqtLfE
-
Petrotchenko, E.V.; Borchers, C.H.: Cross-linking combined with mass spectrometry for structural proteomics. Mass Spectrom. Rev. 29, 862-876 (2010)
-
(2010)
Mass Spectrom. Rev.
, vol.29
, pp. 862-876
-
-
Petrotchenko, E.V.1
Borchers, C.H.2
-
10
-
-
0035326345
-
Isotope-tagged cross-linking reagents. A new tool in mass spectrometric protein interaction analysis
-
10.1021/ac001379a
-
Müller, D.R.; Schindler, P.; Towbin, H.; Wirth, U.; Voshol, H.; Hoving, S.; Steinmetz, M.O.: Isotope-tagged cross-linking reagents. A new tool in mass spectrometric protein interaction analysis. Anal. Chem. 73, 1927-1934 (2001)
-
(2001)
Anal. Chem.
, vol.73
, pp. 1927-1934
-
-
Müller, D.R.1
Schindler, P.2
Towbin, H.3
Wirth, U.4
Voshol, H.5
Hoving, S.6
Steinmetz, M.O.7
-
11
-
-
29144481619
-
Mapping protein interfaces by chemical cross-linking and Fourier transform ion cyclotron resonance mass spectrometry: Application to a calmodulin/adenylyl cyclase 8 peptide complex
-
10.1255/ejms.748 1:CAS:528:DC%2BD2MXhtlegsrvM
-
Schmidt, A.; Kalkhof, S.; Ihling, C.; Cooper, D.M.F.; Sinz, A.: Mapping protein interfaces by chemical cross-linking and Fourier transform ion cyclotron resonance mass spectrometry: application to a calmodulin/adenylyl cyclase 8 peptide complex. Eur. J. Mass Spectrom. 11, 525-534 (2005)
-
(2005)
Eur. J. Mass Spectrom.
, vol.11
, pp. 525-534
-
-
Schmidt, A.1
Kalkhof, S.2
Ihling, C.3
Cooper, D.M.F.4
Sinz, A.5
-
12
-
-
84875883313
-
Mixed-isotope labeling with LC-IMS-MS for characterization of protein-protein interactions by chemical cross-linking
-
10.1007/s13361-012-0565-x 1:CAS:528:DC%2BC3sXjsVWqsb8%3D
-
Merkley, E.D.; Baker, E.S.; Crowell, K.L.; Orton, D.J.; Taverner, T.; Ansong, C.; Ibrahim, Y.M.; Burnet, M.C.; Cort, J.R.; Anderson, G.A.; Smith, R.D.; Adkins, J.N.: Mixed-isotope labeling with LC-IMS-MS for characterization of protein-protein interactions by chemical cross-linking. J. Am. Soc. Mass Spectrom. 24, 444-449 (2013)
-
(2013)
J. Am. Soc. Mass Spectrom.
, vol.24
, pp. 444-449
-
-
Merkley, E.D.1
Baker, E.S.2
Crowell, K.L.3
Orton, D.J.4
Taverner, T.5
Ansong, C.6
Ibrahim, Y.M.7
Burnet, M.C.8
Cort, J.R.9
Anderson, G.A.10
Smith, R.D.11
Adkins, J.N.12
-
13
-
-
2242437182
-
Characterization of an antagonist interleukin-6 dimer by stable isotope labeling, cross-linking, and mass spectrometry
-
10.1074/jbc.M207370200 1:CAS:528:DC%2BD38XovFKhuro%3D
-
Taverner, T.; Hall, N.E.; O'Hair, R.A.J.; Simpson, R.J.: Characterization of an antagonist interleukin-6 dimer by stable isotope labeling, cross-linking, and mass spectrometry. J. Biol. Chem. 277, 46487-46492 (2002)
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 46487-46492
-
-
Taverner, T.1
Hall, N.E.2
O'Hair, R.A.J.3
Simpson, R.J.4
-
14
-
-
0031009909
-
Calcium binding, but not a calcium-myristoyl switch, controls the ability of guanylyl cyclase-activating protein GCAP-2 to regulate photoreceptor guanylyl cyclase
-
10.1074/jbc.272.22.14327 1:CAS:528:DyaK2sXjsFOru78%3D
-
Olshevskaya, E.V.; Hughes, R.E.; Hurley, J.B.; Dizhoor, A.M.: Calcium binding, but not a calcium-myristoyl switch, controls the ability of guanylyl cyclase-activating protein GCAP-2 to regulate photoreceptor guanylyl cyclase. J. Biol. Chem. 272, 14327-14333 (1997)
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 14327-14333
-
-
Olshevskaya, E.V.1
Hughes, R.E.2
Hurley, J.B.3
Dizhoor, A.M.4
-
15
-
-
0028793850
-
2+-binding protein activating photo receptor guanylyl cyclase
-
10.1074/jbc.270.42.25200 1:CAS:528:DyaK2MXovFWmt7c%3D
-
2+-binding protein activating photo receptor guanylyl cyclase. J. Biol. Chem. 270, 25200-25206 (1995)
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 25200-25206
-
-
Dizhoor, A.M.1
Olshevskaya, E.V.2
Henzel, W.J.3
Wong, S.C.4
Stults, J.T.5
Ankoudinova, I.6
Hurley, J.B.7
-
16
-
-
15844405616
-
The membrane guanylyl cyclase, retinal guanylyl cyclase-1, is activated through its intracellular domain
-
10.1074/jbc.271.20.11646 1:CAS:528:DyaK28XjtV2ltLw%3D
-
Laura, R.P.; Dizhoor, A.M.; Hurley, J.B.: The membrane guanylyl cyclase, retinal guanylyl cyclase-1, is activated through its intracellular domain. J. Biol. Chem. 271, 11646-11651 (1996)
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 11646-11651
-
-
Laura, R.P.1
Dizhoor, A.M.2
Hurley, J.B.3
-
17
-
-
75049084372
-
Membrane guanylate cyclase is a beautiful signal transduction machine: Overview
-
10.1007/s11010-009-0336-6 1:CAS:528:DC%2BC3cXkt1Gqtg%3D%3D
-
Sharma, R.K.: Membrane guanylate cyclase is a beautiful signal transduction machine: overview. Mol. Cell. Biochem. 334, 3-36 (2010)
-
(2010)
Mol. Cell. Biochem.
, vol.334
, pp. 3-36
-
-
Sharma, R.K.1
-
18
-
-
0028903752
-
Identification of sequences mediating guanylyl cyclase dimerization
-
10.1021/bi00014a025 1:CAS:528:DyaK2MXks1Kju70%3D
-
Wilson, E.M.; Chinkers, M.: Identification of sequences mediating guanylyl cyclase dimerization. Biochemistry 34, 4696-4701 (1995)
-
(1995)
Biochemistry
, vol.34
, pp. 4696-4701
-
-
Wilson, E.M.1
Chinkers, M.2
-
19
-
-
0030911218
-
Two eye guanylyl cyclases are expressed in the same photoreceptor cells and form homomers in preference to heteromers
-
10.1074/jbc.272.21.13738 1:CAS:528:DyaK2sXjsFWhsbk%3D
-
Yang, R.B.; Garbers, D.L.: Two eye guanylyl cyclases are expressed in the same photoreceptor cells and form homomers in preference to heteromers. J. Biol. Chem. 272, 13738-13742 (1997)
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 13738-13742
-
-
Yang, R.B.1
Garbers, D.L.2
-
20
-
-
0033520296
-
Dimerization of guanylyl cyclase-activating protein and a mechanism of photoreceptor guanylyl cyclase activation
-
10.1074/jbc.274.36.25583 1:CAS:528:DyaK1MXmtVWhsrg%3D
-
Olshevskaya, E.V.; Ermilov, A.N.; Dizhoor, A.M.: Dimerization of guanylyl cyclase-activating protein and a mechanism of photoreceptor guanylyl cyclase activation. J. Biol. Chem. 274, 25583-25587 (1999)
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 25583-25587
-
-
Olshevskaya, E.V.1
Ermilov, A.N.2
Dizhoor, A.M.3
-
21
-
-
0033516487
-
Three-dimensional structure of guanylyl cyclase activating protein-2, a calcium-sensitive modulator of photoreceptor guanylyl cyclases
-
10.1074/jbc.274.27.19329 1:CAS:528:DyaK1MXksVWltbs%3D
-
Ames, J.B.; Dizhoor, A.M.; Ikura, M.; Palczewski, K.; Stryer, L.: Three-dimensional structure of guanylyl cyclase activating protein-2, a calcium-sensitive modulator of photoreceptor guanylyl cyclases. J. Biol. Chem. 274, 19329-19337 (1999)
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 19329-19337
-
-
Ames, J.B.1
Dizhoor, A.M.2
Ikura, M.3
Palczewski, K.4
Stryer, L.5
-
23
-
-
3042665732
-
Blue silver: A very sensitive colloidal coomassie G-250 staining for proteome analysis
-
10.1002/elps.200305844 1:CAS:528:DC%2BD2cXks12ht7c%3D
-
Candiano, G.; Bruschi, M.; Musante, L.; Santucci, L.; Ghiggeri, G.M.; Carnemolla, B.; Orecchia, P.; Zardi, L.; Righetti, P.G.: Blue silver: a very sensitive colloidal coomassie G-250 staining for proteome analysis. Electrophoresis 25, 1327-1333 (2004)
-
(2004)
Electrophoresis
, vol.25
, pp. 1327-1333
-
-
Candiano, G.1
Bruschi, M.2
Musante, L.3
Santucci, L.4
Ghiggeri, G.M.5
Carnemolla, B.6
Orecchia, P.7
Zardi, L.8
Righetti, P.G.9
-
24
-
-
0002277767
-
Protein analysis by mass spectrometry
-
Creighton, T.E. (ed.) 2nd ed. Oxford University Press, Oxford
-
Jensen, O.N.; Shevchenko, A.; Mann, M.: Protein analysis by mass spectrometry. In: Creighton, T.E. (ed.) In Protein Structure - A Practical Approach, 2nd ed.; pp. 29-57. Oxford University Press, Oxford (1997)
-
(1997)
Protein Structure - A Practical Approach
, pp. 29-57
-
-
Jensen, O.N.1
Shevchenko, A.2
Mann, M.3
-
25
-
-
34548178909
-
In-gel digestion for mass spectrometric characterization of proteins and proteomes
-
10.1038/nprot.2006.468 1:CAS:528:DC%2BD2sXhtFGjt7nM
-
Shevchenko, A.; Tomas, H.; Havlis, J.; Olsen, J.V.; Mann, M.: In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat. Protoc. 1, 2856-2860 (2006)
-
(2006)
Nat. Protoc.
, vol.1
, pp. 2856-2860
-
-
Shevchenko, A.1
Tomas, H.2
Havlis, J.3
Olsen, J.V.4
Mann, M.5
-
26
-
-
84856158133
-
StavroX - A software for analyzing crosslinked products in protein interaction studies
-
10.1007/s13361-011-0261-2
-
Götze, M.; Pettelkau, J.; Schaks, S.; Bosse, K.; Ihling, C.; Krauth, F.; Fritzsche, R.; Kühn, U.; Sinz, A.: StavroX - a software for analyzing crosslinked products in protein interaction studies. J. Am. Soc. Mass. Spectrom. 23, 76-87 (2012)
-
(2012)
J. Am. Soc. Mass. Spectrom.
, vol.23
, pp. 76-87
-
-
Götze, M.1
Pettelkau, J.2
Schaks, S.3
Bosse, K.4
Ihling, C.5
Krauth, F.6
Fritzsche, R.7
Kühn, U.8
Sinz, A.9
-
27
-
-
47749144375
-
Chances and pitfalls of chemical cross-linking with amine-reactive N-hydroxysuccinimide esters
-
10.1007/s00216-008-2231-5 1:CAS:528:DC%2BD1cXhtFeiurrO
-
Kalkhof, S.; Sinz, A.: Chances and pitfalls of chemical cross-linking with amine-reactive N-hydroxysuccinimide esters. Anal. Bioanal. Chem. 392, 305-312 (2008)
-
(2008)
Anal. Bioanal. Chem.
, vol.392
, pp. 305-312
-
-
Kalkhof, S.1
Sinz, A.2
-
28
-
-
0023040484
-
Thermodynamics of dimer and tetramer formations in rabbit muscle phosphofructokinase
-
10.1021/bi00372a022 1:CAS:528:DyaL28Xmt1Wltbs%3D
-
Luther, M.A.; Cai, G.Z.; Lee, J.C.: Thermodynamics of dimer and tetramer formations in rabbit muscle phosphofructokinase. Biochemistry 25, 7931-7937 (1986)
-
(1986)
Biochemistry
, vol.25
, pp. 7931-7937
-
-
Luther, M.A.1
Cai, G.Z.2
Lee, J.C.3
-
29
-
-
84865192069
-
Resolution-by-proxy: A simple measure for assessing and comparing the overall quality of NMR protein structures
-
10.1007/s10858-012-9637-2 1:CAS:528:DC%2BC38XhtFSis7rO
-
Berjanskii, M.; Zhou, J.J.; Liang, Y.J.; Lin, G.H.; Wishart, D.S.: Resolution-by-proxy: a simple measure for assessing and comparing the overall quality of NMR protein structures. J. Biomol. NMR 53, 167-180 (2012)
-
(2012)
J. Biomol. NMR
, vol.53
, pp. 167-180
-
-
Berjanskii, M.1
Zhou, J.J.2
Liang, Y.J.3
Lin, G.H.4
Wishart, D.S.5
-
30
-
-
84855757480
-
-
Chemical Computing Group Inc.: Montreal, Canada
-
Molecular Operating Environment (MOE), Chemical Computing Group Inc.: Montreal, Canada (2010)
-
(2010)
Molecular Operating Environment (MOE)
-
-
-
31
-
-
77954275738
-
HexServer: An FFT-based protein docking server powered by graphics processors
-
10.1093/nar/gkq311 1:CAS:528:DC%2BC3cXotVSqsLY%3D
-
Macindoe, G.; Mavridis, L.; Venkatraman, V.; Devignes, M.D.; Ritchie, D.W.: HexServer: an FFT-based protein docking server powered by graphics processors. Nucleic Acids Res. 38, W445-W449 (2010)
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Macindoe, G.1
Mavridis, L.2
Venkatraman, V.3
Devignes, M.D.4
Ritchie, D.W.5
-
32
-
-
0345832301
-
ClusPro: An automated docking and discrimination method for the prediction of protein complexes
-
10.1093/bioinformatics/btg371 1:CAS:528:DC%2BD2cXns1yj
-
Comeau, S.R.; Gatchell, D.W.; Vajda, S.; Camacho, C.J.: ClusPro: an automated docking and discrimination method for the prediction of protein complexes. Bioinformatics 20, 45-50 (2004)
-
(2004)
Bioinformatics
, vol.20
, pp. 45-50
-
-
Comeau, S.R.1
Gatchell, D.W.2
Vajda, S.3
Camacho, C.J.4
-
33
-
-
33747840389
-
GRAMM-X public web server for protein-protein docking
-
10.1093/nar/gkl206 1:CAS:528:DC%2BD28Xps1yiu7k%3D
-
Tovchigrechko, A.; Vakser, I.A.: GRAMM-X public web server for protein-protein docking. Nucleic Acids Res. 34, W310-W314 (2006)
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Tovchigrechko, A.1
Vakser, I.A.2
-
34
-
-
80052903046
-
Accelerating protein docking in ZDOCK using an advanced 3D convolution library
-
doi: 10.1371/journal.pone.0024657
-
Pierce, B.G.; Hourai, Y.; Weng, Z.P.: Accelerating protein docking in ZDOCK using an advanced 3D convolution library. Plos One 6, (9): e24657 (2011). doi: 10.1371/journal.pone.0024657
-
(2011)
Plos One
, vol.6
, Issue.9
-
-
Pierce, B.G.1
Hourai, Y.2
Weng, Z.P.3
-
35
-
-
84875151263
-
SwarmDock: A server for flexible protein-protein docking
-
10.1093/bioinformatics/btt038 1:CAS:528:DC%2BC3sXktFOjsr0%3D
-
Torchala, M.; Moal, I.H.; Chaleil, R.A.G.; Fernandez-Recio, J.; Bates, P.A.: SwarmDock: a server for flexible protein-protein docking. Bioinformatics 29, 807-809 (2013)
-
(2013)
Bioinformatics
, vol.29
, pp. 807-809
-
-
Torchala, M.1
Moal, I.H.2
Chaleil, R.A.G.3
Fernandez-Recio, J.4
Bates, P.A.5
-
36
-
-
21644476468
-
PatchDock and SymmDock: Servers for rigid and symmetric docking
-
10.1093/nar/gki481 1:CAS:528:DC%2BD2MXlslyqtbo%3D
-
Schneidman-Duhovny, D.; Inbar, Y.; Nussinov, R.; Wolfson, H.J.: PatchDock and SymmDock: servers for rigid and symmetric docking. Nucleic Acids Res. 33, W363-W367 (2005)
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Schneidman-Duhovny, D.1
Inbar, Y.2
Nussinov, R.3
Wolfson, H.J.4
-
37
-
-
77955391393
-
The HADDOCK web server for data-driven biomolecular docking
-
10.1038/nprot.2010.32
-
De Vries, S.J.; van Dijk, M.; Bonvin, A.: The HADDOCK web server for data-driven biomolecular docking. Nat. Protoc. 5, 883-897 (2010)
-
(2010)
Nat. Protoc.
, vol.5
, pp. 883-897
-
-
De Vries, S.J.1
Van Dijk, M.2
Bonvin, A.3
-
38
-
-
84862614975
-
-
University of California San Francisco
-
Case, D.A.; Darden, T.A.; Cheatham III, T.E.; Simmerling, C.L.; Wang, J.; Duke, R.E.; Luo, R.; Walker, R.C.; Zhang, W.; Merz, K.M.; Roberts, B.; Hayik, S.; Roitberg, A.; Seabra, G.; Swails, J.; Goetz, A.W.; Kolossváry, I.; Wong, K.F.; Paesani, F.; Vanicek, J.; Wolf, R.M.; Liu, J.; Wu, X.; Brozell, S.R.; Steinbrecher, T.; Gohlke, H.; Cai, Q.; Ye, X.; Wang, J.; Hsieh, M.J.; Cui, G.; Roe, D.R.; Mathews, D.H.; Seetin, M.G.; Salomon-Ferrer, R.; Sagui, C.; Babin, V.; Luchko, T.; Gusarov, S.; Kovalenko, A.; Kollman, P.A.: AMBER 12. University of California, San Francisco (2012)
-
(2012)
AMBER 12
-
-
Case, D.A.1
Darden, T.A.2
Cheatham III, T.E.3
Simmerling, C.L.4
Wang, J.5
Duke, R.E.6
Luo, R.7
Walker, R.C.8
Zhang, W.9
Merz, K.M.10
Roberts, B.11
Hayik, S.12
Roitberg, A.13
Seabra, G.14
Swails, J.15
Goetz, A.W.16
Kolossváry, I.17
Wong, K.F.18
Paesani, F.19
Vanicek, J.20
Wolf, R.M.21
Liu, J.22
Wu, X.23
Brozell, S.R.24
Steinbrecher, T.25
Gohlke, H.26
Cai, Q.27
Ye, X.28
Wang, J.29
Hsieh, M.J.30
Cui, G.31
Roe, D.R.32
Mathews, D.H.33
Seetin, M.G.34
Salomon-Ferrer, R.35
Sagui, C.36
Babin, V.37
Luchko, T.38
Gusarov, S.39
Kovalenko, A.40
Kollman, P.A.41
more..
-
39
-
-
66249146087
-
Chemical cross-linking with NHS esters: A systematic study on amino acid reactivities
-
10.1002/jms.1544
-
Mädler, S.; Bich, C.; Touboul, D.; Zenobi, R.: Chemical cross-linking with NHS esters: a systematic study on amino acid reactivities. J. Mass Spectrom. 44, 694-706 (2009)
-
(2009)
J. Mass Spectrom.
, vol.44
, pp. 694-706
-
-
Mädler, S.1
Bich, C.2
Touboul, D.3
Zenobi, R.4
-
40
-
-
84862543719
-
Structural insights into retinal guanylylcyclase-GCAP-2 interaction determined by cross-linking and mass spectrometry
-
10.1021/bi300064v 1:CAS:528:DC%2BC38XnsFOnurg%3D
-
Pettelkau, J.; Schröder, T.; Ihling, C.H.; Olausson, B.E.S.; Kölbel, K.; Lange, C.; Sinz, A.: Structural insights into retinal guanylylcyclase-GCAP-2 interaction determined by cross-linking and mass spectrometry. Biochemistry 51, 4932-4949 (2012)
-
(2012)
Biochemistry
, vol.51
, pp. 4932-4949
-
-
Pettelkau, J.1
Schröder, T.2
Ihling, C.H.3
Olausson, B.E.S.4
Kölbel, K.5
Lange, C.6
Sinz, A.7
-
41
-
-
77149146167
-
Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry
-
10.1038/emboj.2009.401 1:CAS:528:DC%2BC3cXlvFGkug%3D%3D
-
Chen, Z.A.; Jawhari, A.; Fischer, L.; Buchen, C.; Tahir, S.; Kamenski, T.; Rasmussen, M.; Lariviere, L.; Bukowski-Wills, J.C.; Nilges, M.; Cramer, P.; Rappsilber, J.: Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J. 29, 717-726 (2010)
-
(2010)
EMBO J.
, vol.29
, pp. 717-726
-
-
Chen, Z.A.1
Jawhari, A.2
Fischer, L.3
Buchen, C.4
Tahir, S.5
Kamenski, T.6
Rasmussen, M.7
Lariviere, L.8
Bukowski-Wills, J.C.9
Nilges, M.10
Cramer, P.11
Rappsilber, J.12
-
42
-
-
0034973193
-
Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers
-
10.1110/ps.51201 1:CAS:528:DC%2BD3MXkvVejt7c%3D
-
Green, N.S.; Reisler, E.; Houk, K.N.: Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers. Protein Sci. 10, 1293-1304 (2001)
-
(2001)
Protein Sci.
, vol.10
, pp. 1293-1304
-
-
Green, N.S.1
Reisler, E.2
Houk, K.N.3
-
43
-
-
0041846956
-
MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides
-
10.1016/S1044-0305(03)00327-1 1:CAS:528:DC%2BD3sXlvVCqtbo%3D
-
Schilling, B.; Row, R.H.; Gibson, B.W.; Guo, X.; Young, M.M.: MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides. J. Am. Soc. Mass. Spectrom. 14, 834-850 (2003)
-
(2003)
J. Am. Soc. Mass. Spectrom.
, vol.14
, pp. 834-850
-
-
Schilling, B.1
Row, R.H.2
Gibson, B.W.3
Guo, X.4
Young, M.M.5
-
44
-
-
79952548800
-
Fragmentation features of intermolecular cross-linked peptides using N-hydroxy-succinimide esters by MALDI- and ESI-MS/MS for use in structural proteomics
-
10.1002/jms.1951 1:CAS:528:DC%2BC3MXptVehsLk%3D
-
Santos, L.F.A.; Iglesias, A.H.; Gozzo, F.C.: Fragmentation features of intermolecular cross-linked peptides using N-hydroxy-succinimide esters by MALDI- and ESI-MS/MS for use in structural proteomics. J. Mass Spectrom. 46, 742-750 (2011)
-
(2011)
J. Mass Spectrom.
, vol.46
, pp. 742-750
-
-
Santos, L.F.A.1
Iglesias, A.H.2
Gozzo, F.C.3
-
45
-
-
78349301919
-
Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking
-
10.1002/prot.22848 1:CAS:528:DC%2BC3cXhsF2jsrnF
-
Kalkhof, S.; Haehn, S.; Paulsson, M.; Smyth, N.; Meiler, J.; Sinz, A.: Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking. Proteins 78, 3409-3427 (2010)
-
(2010)
Proteins
, vol.78
, pp. 3409-3427
-
-
Kalkhof, S.1
Haehn, S.2
Paulsson, M.3
Smyth, N.4
Meiler, J.5
Sinz, A.6
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