-
1
-
-
41449084503
-
Biotin sensing. Universal influence of biotin status on transcription
-
Beckett, D. (2007) Biotin sensing. Universal influence of biotin status on transcription. Annu. Rev. Genet. 41, 443-464
-
(2007)
Annu. Rev. Genet.
, vol.41
, pp. 443-464
-
-
Beckett, D.1
-
2
-
-
0023679220
-
Expression of the biotin biosynthetic operon of Escherichia coli is regulated by the rate of protein biotination
-
Cronan, J. E., Jr. (1988) Expression of the biotin biosynthetic operon of Escherichia coli is regulated by the rate of protein biotination. J. Biol. Chem. 263, 10332-10336
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 10332-10336
-
-
Cronan Jr., J.E.1
-
3
-
-
0037016018
-
The biotin repressor. Thermodynamic coupling of corepressor binding, protein assembly, and sequence-specific DNA binding
-
Streaker, E. D., Gupta, A., and Beckett, D. (2002) The biotin repressor. Thermodynamic coupling of corepressor binding, protein assembly, and sequence-specific DNA binding. Biochemistry 41, 14263-14271
-
(2002)
Biochemistry
, vol.41
, pp. 14263-14271
-
-
Streaker, E.D.1
Gupta, A.2
Beckett, D.3
-
4
-
-
0034982772
-
Oxaloacetate synthesis in the methanarchaeon Methanosarcina barkeri. Pyruvate carboxylase genes and a putative Escherichia coli-type bifunctional biotin protein ligase gene (bpl/birA) exhibit a unique organization
-
Mukhopadhyay, B., Purwantini, E., Kreder, C. L., and Wolfe, R. S. (2001) Oxaloacetate synthesis in the methanarchaeon Methanosarcina barkeri. Pyruvate carboxylase genes and a putative Escherichia coli-type bifunctional biotin protein ligase gene (bpl/birA) exhibit a unique organization. J. Bacteriol. 183, 3804-3810
-
(2001)
J. Bacteriol.
, vol.183
, pp. 3804-3810
-
-
Mukhopadhyay, B.1
Purwantini, E.2
Kreder, C.L.3
Wolfe, R.S.4
-
5
-
-
0032525244
-
Amap of the biotin repressor-biotin operator interface. Binding of a winged helix-turn-helix protein dimer to a forty base-pair site
-
Streaker, E. D., and Beckett, D. (1998)Amap of the biotin repressor-biotin operator interface. Binding of a winged helix-turn-helix protein dimer to a forty base-pair site. J. Mol. Biol. 278, 787-800
-
(1998)
J. Mol. Biol.
, vol.278
, pp. 787-800
-
-
Streaker, E.D.1
Beckett, D.2
-
6
-
-
0026666377
-
Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains
-
Wilson, K. P., Shewchuk, L. M., Brennan, R. G., Otsuka, A. J., and Matthews, B. W. (1992) Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains. Proc. Natl. Acad. Sci. U.S.A. 89, 9257-9261
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 9257-9261
-
-
Wilson, K.P.1
Shewchuk, L.M.2
Brennan, R.G.3
Otsuka, A.J.4
Matthews, B.W.5
-
7
-
-
0033600802
-
Ligand-linked structural changes in the Escherichia coli biotin repressor. The significance of surface loops for binding and allostery
-
Streaker, E. D., and Beckett, D. (1999) Ligand-linked structural changes in the Escherichia coli biotin repressor. The significance of surface loops for binding and allostery. J. Mol. Biol. 292, 619-632
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 619-632
-
-
Streaker, E.D.1
Beckett, D.2
-
8
-
-
84857834296
-
Altered regulation of Escherichia coli biotin biosynthesis in BirA superrepressor mutant strains
-
Chakravartty, V., and Cronan, J. E. (2012) Altered regulation of Escherichia coli biotin biosynthesis in BirA superrepressor mutant strains. J. Bacteriol. 194, 1113-1126
-
(2012)
J. Bacteriol.
, vol.194
, pp. 1113-1126
-
-
Chakravartty, V.1
Cronan, J.E.2
-
9
-
-
0035932977
-
Corepressor-induced organization and assembly of the biotin repressor. A model for allosteric activation of a transcriptional regulator
-
Weaver, L. H., Kwon, K., Beckett, D., and Matthews, B. W. (2001) Corepressor-induced organization and assembly of the biotin repressor. A model for allosteric activation of a transcriptional regulator. Proc. Natl. Acad. Sci. U.S.A. 98, 6045-6050
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 6045-6050
-
-
Weaver, L.H.1
Kwon, K.2
Beckett, D.3
Matthews, B.W.4
-
10
-
-
33344466006
-
Co-repressor induced order and biotin repressor dimerization. A case for divergent followed by convergent evolution
-
Wood, Z. A., Weaver, L. H., Brown, P. H., Beckett, D., and Matthews, B. W. (2006) Co-repressor induced order and biotin repressor dimerization. A case for divergent followed by convergent evolution. J. Mol. Biol. 357, 509-523
-
(2006)
J. Mol. Biol.
, vol.357
, pp. 509-523
-
-
Wood, Z.A.1
Weaver, L.H.2
Brown, P.H.3
Beckett, D.4
Matthews, B.W.5
-
11
-
-
0030060228
-
Evidence for interdomain interaction in the Escherichia coli repressor of biotin biosynthesis from studies of an N-terminal domain deletion mutant
-
Xu, Y., and Beckett, D. (1996) Evidence for interdomain interaction in the Escherichia coli repressor of biotin biosynthesis from studies of an N-terminal domain deletion mutant. Biochemistry 35, 1783-1792
-
(1996)
Biochemistry
, vol.35
, pp. 1783-1792
-
-
Xu, Y.1
Beckett, D.2
-
12
-
-
77956600125
-
In vivo biotinylation of bacterial magnetic particles by a truncated form of Escherichia coli biotin ligase and biotin acceptor peptide
-
Maeda, Y., Yoshino, T., and Matsunaga, T. (2010) In vivo biotinylation of bacterial magnetic particles by a truncated form of Escherichia coli biotin ligase and biotin acceptor peptide. Appl. Environ. Microbiol. 76, 5785-5790
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 5785-5790
-
-
Maeda, Y.1
Yoshino, T.2
Matsunaga, T.3
-
13
-
-
0024571640
-
The helix-turn-helix DNA binding motif
-
Brennan, R. G., and Matthews, B. W. (1989) The helix-turn-helix DNA binding motif. J. Biol. Chem. 264, 1903-1906
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 1903-1906
-
-
Brennan, R.G.1
Matthews, B.W.2
-
14
-
-
0029160348
-
Gene activation by the Escherichia coli positive regulator OmpR. A mutational study of the DNA-binding domain of OmpR
-
Kato, N., Tsuzuki, M., Aiba, H., and Mizuno, T. (1995) Gene activation by the Escherichia coli positive regulator OmpR. A mutational study of the DNA-binding domain of OmpR. Mol. Gen. Genet. 248, 399-406
-
(1995)
Mol. Gen. Genet.
, vol.248
, pp. 399-406
-
-
Kato, N.1
Tsuzuki, M.2
Aiba, H.3
Mizuno, T.4
-
15
-
-
0015303407
-
A mutant of Escherichia coli that requires high concentrations of biotin
-
Campbell, A., Del Campillo-Campbell, A., and Chang, R. (1972) A mutant of Escherichia coli that requires high concentrations of biotin. Proc. Natl. Acad. Sci. U.S.A. 69, 676-680
-
(1972)
Proc. Natl. Acad. Sci. U.S.A.
, vol.69
, pp. 676-680
-
-
Campbell, A.1
Del Campillo-Campbell, A.2
Chang, R.3
-
16
-
-
0018946749
-
Use of bio-lac fusion strains to study regulation of biotin biosynthesis in Escherichia coli
-
Barker, D. F., and Campbell, A. M. (1980) Use of bio-lac fusion strains to study regulation of biotin biosynthesis in Escherichia coli. J. Bacteriol. 143, 789-800
-
(1980)
J. Bacteriol.
, vol.143
, pp. 789-800
-
-
Barker, D.F.1
Campbell, A.M.2
-
17
-
-
0022535750
-
DNA-binding and enzymatic domains of the bifunctional biotin operon repressor (BirA) of Escherichia coli
-
Buoncristiani, M. R., Howard, P. K., and Otsuka, A. J. (1986) DNA-binding and enzymatic domains of the bifunctional biotin operon repressor (BirA) of Escherichia coli. Gene 44, 255-261
-
(1986)
Gene
, vol.44
, pp. 255-261
-
-
Buoncristiani, M.R.1
Howard, P.K.2
Otsuka, A.J.3
-
18
-
-
0033846484
-
Function of a conserved sequence motif in biotin holoenzyme synthetases
-
Kwon, K., and Beckett, D. (2000) Function of a conserved sequence motif in biotin holoenzyme synthetases. Protein Sci. 9, 1530-1539
-
(2000)
Protein Sci.
, vol.9
, pp. 1530-1539
-
-
Kwon, K.1
Beckett, D.2
-
19
-
-
0019473758
-
Genetic and biochemical characterization of the birA gene and its product. Evidence for a direct role of biotin holoenzyme synthetase in repression of the biotin operon in Escherichia coli
-
Barker, D. F., and Campbell, A. M. (1981) Genetic and biochemical characterization of the birA gene and its product. Evidence for a direct role of biotin holoenzyme synthetase in repression of the biotin operon in Escherichia coli. J. Mol. Biol. 146, 469-492
-
(1981)
J. Mol. Biol.
, vol.146
, pp. 469-492
-
-
Barker, D.F.1
Campbell, A.M.2
-
20
-
-
0029565346
-
Evidence for distinct ligand-bound conformational states of the multifunctional Escherichia coli repressor of biotin biosynthesis
-
Xu, Y., Nenortas, E., and Beckett D (1995) Evidence for distinct ligand-bound conformational states of the multifunctional Escherichia coli repressor of biotin biosynthesis. Biochemistry 34, 16624-16631
-
(1995)
Biochemistry
, vol.34
, pp. 16624-16631
-
-
Xu, Y.1
Nenortas, E.2
Beckett, D.3
-
21
-
-
77955602256
-
Structure of the LexA-DNA complex and implications for SOS box measurement
-
Zhang, A. P., Pigli, Y. Z., and Rice, P. A. (2010) Structure of the LexA-DNA complex and implications for SOS box measurement. Nature 466, 883-886
-
(2010)
Nature
, vol.466
, pp. 883-886
-
-
Zhang, A.P.1
Pigli, Y.Z.2
Rice, P.A.3
-
22
-
-
77955395804
-
Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition
-
Ni, L., Xu, W., Kumaraswami, M., and Schumacher, M. A. (2010) Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition. Proc. Natl. Acad. Sci. U.S.A. 107, 11763-11768
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 11763-11768
-
-
Ni, L.1
Xu, W.2
Kumaraswami, M.3
Schumacher, M.A.4
-
23
-
-
0032936785
-
A new use for the "wing" of the "winged" helix-turn-helix motif in the HSF-DNA cocrystal
-
Littlefield, O., and Nelson, H. C. (1999) A new use for the "wing" of the "winged" helix-turn-helix motif in the HSF-DNA cocrystal. Nat. Struct. Biol. 6, 464-470
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 464-470
-
-
Littlefield, O.1
Nelson, H.C.2
-
24
-
-
84857020702
-
Structural and functional aspects of winged-helix domains at the core of transcription initiation complexes
-
Teichmann, M., Dumay-Odelot, H., and Fribourg, S. (2012) Structural and functional aspects of winged-helix domains at the core of transcription initiation complexes. Transcription 3, 2-7
-
(2012)
Transcription
, vol.3
, pp. 2-7
-
-
Teichmann, M.1
Dumay-Odelot, H.2
Fribourg, S.3
-
25
-
-
0003785155
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Miller, J. H. (1972) Experiments in Molecular Genetics, pp. 352-355, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(1972)
Experiments in Molecular Genetics
, pp. 352-355
-
-
Miller, J.H.1
-
26
-
-
0028108943
-
Expression, biotinylation and purification of a biotin-domain peptide from the biotin carboxy carrier protein of Escherichia coli acetyl-CoA carboxylase
-
Chapman-Smith, A., Turner, D. L., Cronan, J. E., Jr., Morris, T. W., and Wallace, J. C. (1994) Expression, biotinylation and purification of a biotin-domain peptide from the biotin carboxy carrier protein of Escherichia coli acetyl-CoA carboxylase. Biochem. J. 302, 881-887
-
(1994)
Biochem. J.
, vol.302
, pp. 881-887
-
-
Chapman-Smith, A.1
Turner, D.L.2
Cronan Jr., J.E.3
Morris, T.W.4
Wallace, J.C.5
-
27
-
-
0018538322
-
Biotinyl 5′-adenylate. Corepressor role in the regulation of the biotin genes of Escherichia coli K-12
-
Prakash, O., and Eisenberg, M. A. (1979) Biotinyl 5′-adenylate. Corepressor role in the regulation of the biotin genes of Escherichia coli K-12. Proc. Natl. Acad. Sci. U.S.A. 76, 5592-5595
-
(1979)
Proc. Natl. Acad. Sci. U.S.A.
, vol.76
, pp. 5592-5595
-
-
Prakash, O.1
Eisenberg, M.A.2
-
28
-
-
4444221565
-
UCSF Chimera - A visualization system for exploratory research and analysis
-
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
29
-
-
0028816609
-
The gene encoding the biotin-apoprotein ligase of Saccharomyces cerevisiae
-
Cronan, J. E., Jr., and Wallace, J. C. (1995) The gene encoding the biotin-apoprotein ligase of Saccharomyces cerevisiae. FEMS Microbiol. Lett. 130, 221-229
-
(1995)
FEMS Microbiol. Lett.
, vol.130
, pp. 221-229
-
-
Cronan Jr., J.E.1
Wallace, J.C.2
-
30
-
-
75149116205
-
The switch regulating transcription of the Escherichia coli biotin operon does not require extensive protein-protein interactions
-
Solbiati, J., and Cronan, J. E. (2010) The switch regulating transcription of the Escherichia coli biotin operon does not require extensive protein-protein interactions. Chem. Biol. 17, 11-17
-
(2010)
Chem. Biol.
, vol.17
, pp. 11-17
-
-
Solbiati, J.1
Cronan, J.E.2
|