Photoisomerization action spectroscopy of the carbocyanine dye DTC + in the gas phase

Journal of Physical Chemistry A

Volumn 117, Issue 50, 2013, Pages 13319-13325

  Adamson, Brian D ^a   Coughlan, Neville J A ^a   Da Silva, Gabriel ^a   Bieske, Evan J ^a  

^a UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ACTION SPECTROSCOPY; ARRIVAL-TIME DISTRIBUTIONS; HELIUM BUFFER GAS; ION MOBILITY SPECTROMETRY; MASTER EQUATIONS; MOLECULAR CATIONS; POLYMETHINE DYE; SHORTER WAVELENGTH;

ABSORPTION SPECTROSCOPY; ELECTRIC FIELDS; ELECTROMAGNETIC WAVE ABSORPTION; GASES; ION SOURCES; ISOMERS; LASER SPECTROSCOPY; POSITIVE IONS;

PHOTOISOMERIZATION;

CARBOCYANINE; COLORING AGENT; N,N' DIETHYLTHIACARBOCYANINE IODIDE; N,N'-DIETHYLTHIACARBOCYANINE IODIDE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; CONFORMATION; GAS; ISOMERISM; PHOTOCHEMISTRY; SPECTROSCOPY;

CARBOCYANINES; COLORING AGENTS; GASES; ISOMERISM; MODELS, MOLECULAR; MOLECULAR CONFORMATION; PHOTOCHEMICAL PROCESSES; SPECTRUM ANALYSIS;

EID: 84890385032     PISSN: 10895639     EISSN: 15205215     Source Type: Journal    
DOI: 10.1021/jp405747q     Document Type: Article

References (39)

1. Wand, A.; Gdor, I.; Zhu, J.; Sheves, M.; Ruhman, S. Shedding New Light on Retinal Protein Photochemistry Annu. Rev. Phys. Chem. 2013, 64, 437-458
2. Browne, W.; Feringa, B. Light Switching of Molecules on Surfaces Annu. Rev. Phys. Chem. 2009, 60, 407-428
3. Ma, X.; Tian, H. Bright Functional Rotaxanes Chem. Soc. Rev. 2010, 39, 70-80
4. Conyard, J.; Addison, K.; Heisler, I. A.; Cnossen, A.; Browne, W. R.; Feringa, B. L.; Meech, S. R. Ultrafast Dynamics in the Power Stroke of a Molecular Rotary Motor Nat. Chem. 2012, 4, 547-551
5. Waldeck, D. H. Photoisomerization Dynamics of Stilbenes Chem. Rev. 1991, 91, 415-436
6. Révész, á.; Schröder, D.; Rokob, T. A.; Havlk, M.; Dolenský, B. In-Flight Epimerization of a Bis-Tröger Base Angew. Chem., Int. Ed. 2011, 50, 2401-2404
7. - Int. J. Mass Spectrom. Ion Processes 1995, 149, 217
8. Hudgins, R. R.; Imai, M.; Jarrold, M. F.; Dugourd, P. High-Resolution Ion Mobility Measurements for Silicon Cluster Anions and Cations J. Chem. Phys. 1999, 111, 7865
9. Kanu, A. B.; Dwivedi, P.; Tam, M.; Matz, L.; Hill, H. H., Jr. Ion Mobility-Mass Spectrometry J. Mass Spectrom. 2008, 43, 1
10. Wyttenbach, T.; Bowers, M. T. Intermolecular Interactions in Biomolecular Systems Examined by Mass Spectrometry Annu. Rev. Phys. Chem. 2007, 58, 511
11. Zucker, S. M.; Lee, S.; Webber, N.; Valentine, S. J.; Reilly, J. P.; Clemmer, D. E. An Ion Mobility/Ion Trap/Photodissociation Instrument for Characterization of Ion Structure J. Am. Soc. Mass Spectrom. 2011, 22, 1477-1485
12. West, W.; Pearce, S.; Grum, F. Stereoisomerism in Cyanine Dyes-meso -Substituted Thiacarbocyanines J. Phys. Chem. 1967, 71, 1316-1326
13. 1H NMR Spectroscopy J. Mol. Struct. 1995, 355, 193-200
14. Baraldi, I.; Carnevali, A.; Momicchioli, F.; Ponterini, G. Electronic Spectra and trans-cis Photoisomerism of Carbocyanines. A Theoretical (CS INDO CI) and Experimental Study Spectrochim. Acta, Part A 1993, 49A, 471-495
15. Aramendia, P. F.; Negri, R. M.; Roman, E. S. Temperature Dependence of Fluorescence and Photoisomerization in Symmetric Carbocyanines. Influence of Medium Viscosity and Molecular Structure J. Phys. Chem. 1994, 98, 3165-3173
16. Adamson, B. D.; Coughlan, N. J. A.; Continetti, R. E.; Bieske, E. J. Changing the Shape of Molecular Ions: Photoisomerization Action Spectroscopy in the Gas Phase Phys. Chem. Chem. Phys. 2013, 15, 9540-9548
17. Rizzo, T. R.; Stearns, J. A.; Boyarkin, O. V. Spectroscopic Studies of Cold, Gas-Phase Biomolecular Ions. International Reviews in Physical Chemistry; Taylor & Francis: London, 2009; Volume 28, Issue 3.
18. 2+ Revealed by Cold Ion Spectroscopy Coupled with FAIMS J. Am. Soc. Mass Spectrom. 2012, 1-25
19. Revercomb, H. E.; Mason, E. A. Theory of Plasma Chromatography/Gaseous Electrophoresis Anal. Chem. 1975, 47, 970-983
20. Frisch, M. J. Gaussian 09, revision A.1; Gaussian Inc.: Wallingford, CT, 2009.
21. Shvartsburg, A. A.; Jarrold, M. F. An Exact Hard-Spheres Scattering Model for the Mobilities of Polyatomic Ions Chem. Phys. Lett. 1996, 261, 86-91
22. Mesleh, M.; Hunter, J.; Shvartsburg, A.; Schatz, G.; Jarrold, M. Structural Information from Ion Mobility Measurements: Effects of the Long-Range Potential J. Phys. Chem. 1996, 100, 16082-16086
23. Mesleh, M. F.; Hunter, J. M.; Shvartsburg, A. A.; Schatz, G. C.; Jarrold, M. F. Structural Information from Ion Mobility Measurements: Effects of the Long-Range Potential J. Phys. Chem. A 1997, 101, 968-968
24. Vladimirova, K. G.; Freidzon, A. Y.; Bagatur'yants, A. A.; Zakharova, G. V.; Chibisov, A. K.; Alfimov, M. V. Modeling the Structure, Absorption Spectra, and cis-trans Isomerization of Thiacarbocyanine Dyes High Energy Chem. 2008, 42, 275-282
25. Di Paolo, R. E.; Scaffardi, L. B.; Duchowicz, R.; Bilmes, G. M. Photoisomerization Dynamics and Spectroscopy of the Polymethine Dye DTCI J. Phys. Chem. 1995, 99, 13796-13799
26. Ponterini, G.; Momicchioli, F. Trans-Cis Photoisomerization Mechanism of Carbocyanines: Experimental Check of Theoretical Models Chem. Phys. 1991, 151, 111-126
27. Baraldi, I.; Carnevali, A.; Momicchioli, F.; Ponterini, G.; Berthier, G. Photoisomerization of 3,3′-Diethyloxacarbocyanine (DOC) and 3,3′-Diethylthiacarbocyanine ((DTC): CD INDO CI Potential Energy Curves for the Free and Solvated Molecules Gazz. Chim. Ital. 1996, 126, 211-215
28. Fouassier, J.; Lougnot, D.; Faure, J. Excited States and Laser Properties of Tricarbocyanine Dyes Opt. Commun. 1976, 18, 263-267
29. Rullière, C. Laser Action and Photoisomerisation of 3,3′-Diethyl Oxadicarbocyanine Iodide (DODCI): Influence of Temperature and Concentration Chem. Phys. Lett. 1976, 43, 303-308
30. Sanchez-Galvez, A.; Hunt, P.; Robb, M. A.; Olivucci, M.; Vreven, T.; Schlegel, H. B. Ultrafast Radiationless Deactivation of Organic Dyes: Evidence for a Two-State Two-Mode Pathway in Polymethine Cyanines J. Am. Chem. Soc. 2000, 122, 2911-2924
31. Krieg, M.; Redmond, R. W. Photophysical Properties of the 3,3′-Dialkylthiacarbocyanine Dyes in Homogeneous Solution Photochem. Photobiol. 1993, 57, 472-479
32. Barker, J. R.; Ortiz, N. F.; Preses, J. M.; Lohr, L. L.; Maranzana, A.; Stimac, P. J.; Nguyen, T. L.; Dhilip Kumar, T. J.; MultiWell-2013 Software; University of Michigan: Ann Arbor, MI, 2013.
33. Barker, J. R. Multiple-Well, Multiple-Path Unimolecular Reaction Systems. I. MultiWell Computer Program Suite Int. J. Chem. Kinet. 2001, 33, 232-245
34. Barker, J. R. Energy Transfer in Master Equation Simulations: A New Approach Int. J. Chem. Kinet. 2009, 41, 748-763
35. -1 J. Chem. Phys. 2000, 112, 4090-4110
36. Lam, A. K. Y.; Li, C.; Khairallah, G.; Kirk, B. B.; Blanksby, S. J.; Trevitt, A. J.; Wille, U.; O'Hair, R. A. J.; da Silva, G. Gas-Phase Reactions of Aryl Radicals with 2-Butyne: An Experimental and Theoretical Investigation Employing the N-Methyl-pyridinium-4-yl Radical Cation Phys. Chem. Chem. Phys. 2012, 14, 2417-2426
37. Golden, D. M. What, Methane Again?! Int. J. Chem. Kinet. 2013, 45, 213-220
38. Pinches, S. J.; da Silva, G. On the Separation of Timescales in Chemically Activated Reactions Int. J. Chem. Kinet. 2013, 45, 387-396
39. 1 Cavity Ring-down Absorption Spectrum of Jet-Cooled Azulene: Dependence of Internal Conversion on the Excess Energy Phys. Chem. Chem. Phys. 1999, 1, 5121-5128