메뉴 건너뛰기




Volumn 117, Issue 48, 2013, Pages 12851-12857

Ultrafast excited-state dynamics and vibrational cooling of 8-oxo-7,8-dihydro-2′-deoxyguanosine in D2O

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOBUTANE PYRIMIDINE DIMERS; EXCITED STATE ABSORPTION; EXCITED-STATE LIFETIME; FEMTOSECOND TIME-RESOLVED; FEMTOSECOND TRANSIENT ABSORPTION SPECTROSCOPY; PHOTO-INDUCED ELECTRON TRANSFER; PHOTOPHYSICAL PARAMETERS; VIBRATIONAL RELAXATION;

EID: 84890068661     PISSN: 10895639     EISSN: 15205215     Source Type: Journal    
DOI: 10.1021/jp4095529     Document Type: Article
Times cited : (19)

References (42)
  • 1
    • 80052794513 scopus 로고    scopus 로고
    • J. Am. Chem. Soc. 2011, 133, 14586-14589
    • (2011) J. Am. Chem. Soc. , vol.133 , pp. 14586-14589
  • 2
    • 0034653650 scopus 로고    scopus 로고
    • The Trap Depth (in DNA) of 8-Oxo-7,8-dihydro-2′-deoxyguanosine as Derived from Electron-Transfer Equilibria in Aqueous Solution
    • Steenken, S.; Jovanovic, S. V.; Bietti, M.; Bernhard, K. The Trap Depth (in DNA) of 8-Oxo-7,8-dihydro-2′-deoxyguanosine as Derived from Electron-Transfer Equilibria in Aqueous Solution J. Am. Chem. Soc. 2000, 122, 2373-2374
    • (2000) J. Am. Chem. Soc. , vol.122 , pp. 2373-2374
    • Steenken, S.1    Jovanovic, S.V.2    Bietti, M.3    Bernhard, K.4
  • 3
    • 84871273149 scopus 로고    scopus 로고
    • Whence Flavins? Redox-Active Ribonucleotides Link Metabolism and Genome Repair to the RNA World
    • Nguyen, K. V.; Burrows, C. J. Whence Flavins? Redox-Active Ribonucleotides Link Metabolism and Genome Repair to the RNA World Acc. Chem. Res. 2012, 45, 2151-2159
    • (2012) Acc. Chem. Res. , vol.45 , pp. 2151-2159
    • Nguyen, K.V.1    Burrows, C.J.2
  • 4
    • 80052794513 scopus 로고    scopus 로고
    • A Prebiotic Role for 8-Oxoguanosine as a Flavin Mimic in Pyrimidine Dimer Photorepair
    • Nguyen, K. V.; Burrows, C. J. A Prebiotic Role for 8-Oxoguanosine as a Flavin Mimic in Pyrimidine Dimer Photorepair J. Am. Chem. Soc. 2011, 133, 14586-14589
    • (2011) J. Am. Chem. Soc. , vol.133 , pp. 14586-14589
    • Nguyen, K.V.1    Burrows, C.J.2
  • 6
    • 0006876277 scopus 로고
    • Photosensitized Cleavage of Thymine Dimer with Reduced Flavin - A Model for Enzymatic Photorepair of DNA
    • Jorns, M. S. Photosensitized Cleavage of Thymine Dimer with Reduced Flavin-A Model for Enzymatic Photorepair of DNA J. Am. Chem. Soc. 1987, 109, 3133-3136
    • (1987) J. Am. Chem. Soc. , vol.109 , pp. 3133-3136
    • Jorns, M.S.1
  • 7
    • 84862866174 scopus 로고    scopus 로고
    • Photorepair of Cyclobutane Pyrimidine Dimers by 8-Oxopurine Nucleosides
    • Nguyen, K. V.; Burrows, C. J. Photorepair of Cyclobutane Pyrimidine Dimers by 8-Oxopurine Nucleosides J. Phys. Org. Chem. 2012, 25, 574-577
    • (2012) J. Phys. Org. Chem. , vol.25 , pp. 574-577
    • Nguyen, K.V.1    Burrows, C.J.2
  • 8
    • 84880363059 scopus 로고    scopus 로고
    • Hydrogen Bond Donors Accelerate Vibrational Cooling of Hot Purine Derivatives in Heavy Water
    • Zhang, Y.; Chen, J.; Kohler, B. Hydrogen Bond Donors Accelerate Vibrational Cooling of Hot Purine Derivatives in Heavy Water J. Phys. Chem. A 2013, 117, 6771-6780
    • (2013) J. Phys. Chem. A , vol.117 , pp. 6771-6780
    • Zhang, Y.1    Chen, J.2    Kohler, B.3
  • 9
    • 84880367513 scopus 로고    scopus 로고
    • Ultrafast Excited-State Dynamics in Hexaethyleneglycol-Linked DNA Homoduplexes Made of A·T Base Pairs
    • Chen, J. Q.; Thazhathveetil, A. K.; Lewis, F. D.; Kohler, B. Ultrafast Excited-State Dynamics in Hexaethyleneglycol-Linked DNA Homoduplexes Made of A·T Base Pairs J. Am. Chem. Soc. 2013, 135, 10290-10293
    • (2013) J. Am. Chem. Soc. , vol.135 , pp. 10290-10293
    • Chen, J.Q.1    Thazhathveetil, A.K.2    Lewis, F.D.3    Kohler, B.4
  • 10
    • 0024841281 scopus 로고
    • Structural and Conformational-Analyses of 8-Hydroxy-2′- deoxyguanosine
    • Culp, S. J.; Cho, B. P.; Kadlubar, F. F.; Evans, F. E. Structural and Conformational-Analyses of 8-Hydroxy-2′-deoxyguanosine Chem. Res. Toxicol. 1989, 2, 416-422
    • (1989) Chem. Res. Toxicol. , vol.2 , pp. 416-422
    • Culp, S.J.1    Cho, B.P.2    Kadlubar, F.F.3    Evans, F.E.4
  • 11
    • 0015138001 scopus 로고
    • Sites and Thermodynamic Quantities Associated with Proton and Metal Ion Interaction with Ribonucleic Acid, Deoxyribonucleic Acid, and Their Constituent Bases, Nucleosides, and Nucleotides
    • Izatt, R. M.; Christensen, J. J.; Rytting, J. H. Sites and Thermodynamic Quantities Associated with Proton and Metal Ion Interaction with Ribonucleic Acid, Deoxyribonucleic Acid, and Their Constituent Bases, Nucleosides, and Nucleotides Chem. Rev. 1971, 71, 439-481
    • (1971) Chem. Rev. , vol.71 , pp. 439-481
    • Izatt, R.M.1    Christensen, J.J.2    Rytting, J.H.3
  • 12
    • 63849244916 scopus 로고    scopus 로고
    • Solution Structure of the DNA Damage Lesion 8-Oxoguanosine from Ultraviolet Resonance Raman Spectroscopy
    • Jayanth, N.; Ramachandran, S.; Puranik, M. Solution Structure of the DNA Damage Lesion 8-Oxoguanosine from Ultraviolet Resonance Raman Spectroscopy J. Phys. Chem. A 2009, 113, 1459-1471
    • (2009) J. Phys. Chem. A , vol.113 , pp. 1459-1471
    • Jayanth, N.1    Ramachandran, S.2    Puranik, M.3
  • 13
    • 69949158122 scopus 로고    scopus 로고
    • Photoinduced Dynamics of Guanosine Monophosphate in Water from Broad-Band Transient Absorption Spectroscopy and Quantum-Chemical Calculations
    • Karunakaran, V.; Kleinermanns, K.; Improta, R.; Kovalenko, S. A. Photoinduced Dynamics of Guanosine Monophosphate in Water from Broad-Band Transient Absorption Spectroscopy and Quantum-Chemical Calculations J. Am. Chem. Soc. 2009, 131, 5839-5850
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 5839-5850
    • Karunakaran, V.1    Kleinermanns, K.2    Improta, R.3    Kovalenko, S.A.4
  • 14
    • 84890063310 scopus 로고    scopus 로고
    • Mode-Specific Vibrational Relaxation of Photoexcited Guanosine 5′-Monophosphate and Its Acid Form: A Femtosecond Broadband Mid-IR Transient Absorption and Theoretical Study
    • 10.1039/C3CP53815J
    • Zhang, Y.; Improta, R.; Kohler, B. Mode-Specific Vibrational Relaxation of Photoexcited Guanosine 5′-Monophosphate and Its Acid Form: A Femtosecond Broadband Mid-IR Transient Absorption and Theoretical Study Phys. Chem. Chem. Phys. 2013, 10.1039/C3CP53815J
    • (2013) Phys. Chem. Chem. Phys.
    • Zhang, Y.1    Improta, R.2    Kohler, B.3
  • 16
    • 0242362228 scopus 로고    scopus 로고
    • Ultrafast Excited-State Dynamics of Adenine and Monomethylated Adenines in Solution: Implications for the Nonradiative Decay Mechanism
    • Cohen, B.; Hare, P. M.; Kohler, B. Ultrafast Excited-State Dynamics of Adenine and Monomethylated Adenines in Solution: Implications for the Nonradiative Decay Mechanism J. Am. Chem. Soc. 2003, 125, 13594-13601
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 13594-13601
    • Cohen, B.1    Hare, P.M.2    Kohler, B.3
  • 18
    • 84863905925 scopus 로고    scopus 로고
    • Ultrafast Nonradiative Decay by Hypoxanthine and Several Methylxanthines in Aqueous and Acetonitrile Solution
    • Chen, J.; Kohler, B. Ultrafast Nonradiative Decay by Hypoxanthine and Several Methylxanthines in Aqueous and Acetonitrile Solution Phys. Chem. Chem. Phys. 2012, 14, 10677-10682
    • (2012) Phys. Chem. Chem. Phys. , vol.14 , pp. 10677-10682
    • Chen, J.1    Kohler, B.2
  • 19
    • 4043151600 scopus 로고    scopus 로고
    • Influence of Secondary Structure on Electronic Energy Relaxation in Adenine Homopolymers
    • Crespo-Hernández, C. E.; Kohler, B. Influence of Secondary Structure on Electronic Energy Relaxation in Adenine Homopolymers J. Phys. Chem. B 2004, 108, 11182-11188
    • (2004) J. Phys. Chem. B , vol.108 , pp. 11182-11188
    • Crespo-Hernández, C.E.1    Kohler, B.2
  • 20
    • 0034721472 scopus 로고    scopus 로고
    • Ultrafast Internal Conversion of Electronically Excited RNA and DNA Nucleosides in Water
    • Pecourt, J. M. L.; Peon, J.; Kohler, B. Ultrafast Internal Conversion of Electronically Excited RNA and DNA Nucleosides in Water J. Am. Chem. Soc. 2000, 122, 9348-9349
    • (2000) J. Am. Chem. Soc. , vol.122 , pp. 9348-9349
    • Pecourt, J.M.L.1    Peon, J.2    Kohler, B.3
  • 21
    • 85051589455 scopus 로고    scopus 로고
    • Erratum
    • Erratum. J. Am. Chem. Soc. 2001, 123, 5166-5166.
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 5166-5166
  • 22
    • 0037206814 scopus 로고    scopus 로고
    • Fluorescence Properties of DNA Nucleosides and Nucleotides: A Refined Steady-State and Femtosecond Investigation
    • Onidas, D.; Markovitsi, D.; Marguet, S.; Sharonov, A.; Gustavsson, T. Fluorescence Properties of DNA Nucleosides and Nucleotides: A Refined Steady-State and Femtosecond Investigation J. Phys. Chem. B 2002, 106, 11367-11374
    • (2002) J. Phys. Chem. B , vol.106 , pp. 11367-11374
    • Onidas, D.1    Markovitsi, D.2    Marguet, S.3    Sharonov, A.4    Gustavsson, T.5
  • 23
    • 17044418064 scopus 로고    scopus 로고
    • Photostability of 9H-Adenine: Mechanisms of the Radiationless Deactivation of the Lowest Excited Singlet States
    • Perun, S.; Sobolewski, A. L.; Domcke, W. Photostability of 9H-Adenine: Mechanisms of the Radiationless Deactivation of the Lowest Excited Singlet States Chem. Phys. 2005, 313, 107-112
    • (2005) Chem. Phys. , vol.313 , pp. 107-112
    • Perun, S.1    Sobolewski, A.L.2    Domcke, W.3
  • 24
    • 18244362335 scopus 로고    scopus 로고
    • Ab Initio Studies on the Radiationless Decay Mechanisms of the Lowest Excited Singlet States of 9H-Adenine
    • Perun, S.; Sobolewski, A. L.; Domcke, W. Ab Initio Studies on the Radiationless Decay Mechanisms of the Lowest Excited Singlet States of 9H-Adenine J. Am. Chem. Soc. 2005, 127, 6257-6265
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 6257-6265
    • Perun, S.1    Sobolewski, A.L.2    Domcke, W.3
  • 25
    • 33745062050 scopus 로고    scopus 로고
    • Adenine and 2-Aminopurine: Paradigms of Modern Theoretical Photochemistry
    • Serrano-Andrés, L.; Merchán, M.; Borin, A. C. Adenine and 2-Aminopurine: Paradigms of Modern Theoretical Photochemistry Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 8691-8696
    • (2006) Proc. Natl. Acad. Sci. U.S.A. , vol.103 , pp. 8691-8696
    • Serrano-Andrés, L.1    Merchán, M.2    Borin, A.C.3
  • 26
    • 49449088107 scopus 로고    scopus 로고
    • Initio Studies on the Photophysics of Guanine Tautomers: Out-of-Plane Deformation and NH Dissociation Pathways to Conical Intersections
    • Yamazaki, S.; Domcke, W. Initio Studies on the Photophysics of Guanine Tautomers: Out-of-Plane Deformation and NH Dissociation Pathways to Conical Intersections J. Phys. Chem. A 2008, 112, 7090-7097
    • (2008) J. Phys. Chem. A , vol.112 , pp. 7090-7097
    • Yamazaki, S.1    Domcke, W.2
  • 27
    • 57449115595 scopus 로고    scopus 로고
    • Nonradiative Decay Mechanisms of the Biologically Relevant Tautomer of Guanine
    • Yamazaki, S.; Domcke, W.; Sobolewski, A. L. Nonradiative Decay Mechanisms of the Biologically Relevant Tautomer of Guanine J. Phys. Chem. A 2008, 112, 11965-11968
    • (2008) J. Phys. Chem. A , vol.112 , pp. 11965-11968
    • Yamazaki, S.1    Domcke, W.2    Sobolewski, A.L.3
  • 28
    • 71049181064 scopus 로고    scopus 로고
    • Photophysics of Xanthine: Computational Study of the Radiationless Decay Mechanisms
    • Yamazaki, S.; Sobolewski, A. L.; Domcke, W. Photophysics of Xanthine: Computational Study of the Radiationless Decay Mechanisms Phys. Chem. Chem. Phys. 2009, 11, 10165-10174
    • (2009) Phys. Chem. Chem. Phys. , vol.11 , pp. 10165-10174
    • Yamazaki, S.1    Sobolewski, A.L.2    Domcke, W.3
  • 29
  • 30
    • 20144369490 scopus 로고    scopus 로고
    • Monitoring the Effect of Ultrafast Deactivation of the Electronic Excited States of DNA Bases and Polynucleotides Following 267 nm Laser Excitation Using Picosecond Time-Resolved Infrared Spectroscopy
    • Kuimova, M. K.; Dyer, J.; George, M. W.; Grills, D. C.; Kelly, J. M.; Matousek, P.; Parker, A. W.; Sun, X. Z.; Towrie, M.; Whelan, A. M. Monitoring the Effect of Ultrafast Deactivation of the Electronic Excited States of DNA Bases and Polynucleotides Following 267 nm Laser Excitation Using Picosecond Time-Resolved Infrared Spectroscopy Chem. Commun. 2005, 1182-1184
    • (2005) Chem. Commun. , pp. 1182-1184
    • Kuimova, M.K.1    Dyer, J.2    George, M.W.3    Grills, D.C.4    Kelly, J.M.5    Matousek, P.6    Parker, A.W.7    Sun, X.Z.8    Towrie, M.9    Whelan, A.M.10
  • 31
    • 63849106973 scopus 로고    scopus 로고
    • A Study of the pH Dependence of Electronically Excited Guanosine Compounds by Picosecond Time-Resolved Infrared Spectroscopy
    • McGovern, D. A.; Doorley, G. W.; Whelan, A. M.; Parker, A. W.; Towrie, M.; Kelly, J. M.; Quinn, S. J. A Study of the pH Dependence of Electronically Excited Guanosine Compounds by Picosecond Time-Resolved Infrared Spectroscopy Photochem. Photobiol. Sci. 2009, 8, 542-548
    • (2009) Photochem. Photobiol. Sci. , vol.8 , pp. 542-548
    • McGovern, D.A.1    Doorley, G.W.2    Whelan, A.M.3    Parker, A.W.4    Towrie, M.5    Kelly, J.M.6    Quinn, S.J.7
  • 32
    • 67649878998 scopus 로고    scopus 로고
    • Ps-TRIR Covers All the Bases - Recent Advances in the Use of Transient IR for the Detection of Short-Lived Species in Nucleic Acids
    • Towrie, M.; Doorley, G. W.; George, M. W.; Parker, A. W.; Quinn, S. J.; Kelly, J. M. ps-TRIR Covers All the Bases-Recent Advances in the Use of Transient IR for the Detection of Short-Lived Species in Nucleic Acids Analyst 2009, 134, 1265-1273
    • (2009) Analyst , vol.134 , pp. 1265-1273
    • Towrie, M.1    Doorley, G.W.2    George, M.W.3    Parker, A.W.4    Quinn, S.J.5    Kelly, J.M.6
  • 34
    • 79955399638 scopus 로고    scopus 로고
    • Broadband Spectral Probing Revealing Ultrafast Photochemical Branching after Ultraviolet Excitation of the Aqueous Phenolate Anion
    • Chen, X. Y.; Larsen, D. S.; Bradforth, S. E.; van Stokkum, I. H. M. Broadband Spectral Probing Revealing Ultrafast Photochemical Branching after Ultraviolet Excitation of the Aqueous Phenolate Anion J. Phys. Chem. A 2011, 115, 3807-3819
    • (2011) J. Phys. Chem. A , vol.115 , pp. 3807-3819
    • Chen, X.Y.1    Larsen, D.S.2    Bradforth, S.E.3    Van Stokkum, I.H.M.4
  • 35
    • 84862678566 scopus 로고    scopus 로고
    • First-Principle Protocol for Calculating Ionization Energies and Redox Potentials of Solvated Molecules and Ions: Theory and Application to Aqueous Phenol and Phenolate
    • Ghosh, D.; Roy, A.; Seidel, R.; Winter, B.; Bradforth, S.; Krylov, A. I. First-Principle Protocol for Calculating Ionization Energies and Redox Potentials of Solvated Molecules and Ions: Theory and Application to Aqueous Phenol and Phenolate J. Phys. Chem. B 2012, 116, 7269-7280
    • (2012) J. Phys. Chem. B , vol.116 , pp. 7269-7280
    • Ghosh, D.1    Roy, A.2    Seidel, R.3    Winter, B.4    Bradforth, S.5    Krylov, A.I.6
  • 37
    • 0037678783 scopus 로고    scopus 로고
    • The Nature and Absolute Hydration Free Energy of the Solvated Electron in Water
    • Zhan, C. G.; Dixon, D. A. The Nature and Absolute Hydration Free Energy of the Solvated Electron in Water J. Phys. Chem. B 2003, 107, 4403-4417
    • (2003) J. Phys. Chem. B , vol.107 , pp. 4403-4417
    • Zhan, C.G.1    Dixon, D.A.2
  • 39
    • 25844448817 scopus 로고    scopus 로고
    • Quantum Chemical Investigation of the Electronic Spectra of the Keto, Enol, and Keto-Imine Tautomers of Cytosine
    • Tomic, K.; Tatchen, J.; Marian, C. M. Quantum Chemical Investigation of the Electronic Spectra of the Keto, Enol, and Keto-Imine Tautomers of Cytosine J. Phys. Chem. A 2005, 109, 8410-8418
    • (2005) J. Phys. Chem. A , vol.109 , pp. 8410-8418
    • Tomic, K.1    Tatchen, J.2    Marian, C.M.3
  • 40
    • 33846286785 scopus 로고    scopus 로고
    • Internal Conversion to the Electronic Ground State Occurs via Two Distinct Pathways for Pyrimidine Bases in Aqueous Solution
    • Hare, P. M.; Crespo-Hernández, C. E.; Kohler, B. Internal Conversion to the Electronic Ground State Occurs via Two Distinct Pathways for Pyrimidine Bases in Aqueous Solution Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 435-440
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 435-440
    • Hare, P.M.1    Crespo-Hernández, C.E.2    Kohler, B.3
  • 42
    • 84881107471 scopus 로고    scopus 로고
    • Excited State Proton-Coupled Electron Transfer in 8-OxoG-C and 8-OxoG-A Base Pairs: A Time Dependent Density Functional Theory (TD-DFT) Study
    • Kumar, A.; Sevilla, M. D. Excited State Proton-Coupled Electron Transfer in 8-OxoG-C and 8-OxoG-A Base Pairs: A Time Dependent Density Functional Theory (TD-DFT) Study Photochem. Photobiol. Sci. 2013, 12, 1328-1340
    • (2013) Photochem. Photobiol. Sci. , vol.12 , pp. 1328-1340
    • Kumar, A.1    Sevilla, M.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.