Detection and quantification of Xanthomonas albilineans by qPCR and potential characterization of sugarcane resistance to leaf scald

Plant Disease

Volumn 98, Issue 1, 2014, Pages 121-126

  Garces, F F ^a   Gutierrez, A ^a   Hoy, J W ^a  

^a LOUISIANA STATE UNIVERSITY AGRICULTURAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84889637616     PISSN: 01912917     EISSN: None     Source Type: Journal    
DOI: 10.1094/PDIS-04-13-0431-RE     Document Type: Article

References (27)

1. Alvarez, A. M., Schenck S., and Benedict, A. A. 1996. Differentiation of Xanthomonas albilineans strains with monoclonal antibody reaction patterns and DNA fingerprints. Plant Pathol. 43:344-349.
2. Champoiseau, P., Daugrois, J. H., Pieretti, I., Cociancich, S., Royer, M., and Rott, P. 2006. High variation in pathogenicity of genetically closely related strains of Xanthomonas albilineans, the sugarcane leaf scald pathogen, in Guadeloupe. Phytopathology 96:1081-1091.
3. Daugrois, J. H., Dumont, V., Champoiseau, P., Costet, L., Boisne-Noc, R., and Rott, P. 2003. Aerial contamination of sugarcane in Guadeloupe by two strains of Xanthomonas albilineans. Eur. J. Plant Pathol. 109:445-458.
4. Davis, M. J., Rott, P., Baudin, P., and Dean, J. L. 1994. Evaluation of selective media and immunoassays for detection of Xanthomonas albilineans, causal agent of sugarcane leaf scald disease. Plant Dis. 78:78-82.
5. Davis, M. J., Rott, P., and Monge, G. A. 1997. Multiplex polymerase chain reaction (PCR) for diagnosis of leaf scald and ratoon stunting diseases. Sugar Azucar 92:26.
6. Davis, M. J., Rott, P., Warmuth, C. J., Chatenet, M., and Baudin, P. 1997. Intraspecific genomic variation within Xanthomonas albilineans, the leaf scald pathogen. Phytopathology 87:316-324.
7. Garces, F. F. 2011. Comparative proteome and qPCR analysis of the sugarcane reaction to leaf scald caused by Xanthomonas albilineans. Ph.D. diss. Louisiana State University, Baton Rouge.
8. Garces, F. F., Balladarez, C., Quiridumbay, G., and Muñoz, C. 2005. Diagnosis of leaf fleck, leaf scald, mosaic, ratoon stunting disease and yellow leaf of sugarcane in commercial fields and quarantine in Ecuador. Proc. Int. Soc. Sugar Cane Technol. 25:695-700.
9. Ginzinger, D. G. 2002. Gene quantification using real-time quantitative PCR: An emerging technology hits the mainstream. Exp. Hematol. 30:503-512.
10. Guzman, M. L., Angel, J. C., Victoria, J. I., and Alvarez, A. 1997. Diagnostico de la escaldadura de la hoja en cana de azucar. Fitopatol. Colomb. 21:10-17.
11. Higuchi, R., Fockler, C., Dollingger, G., and Waterson, R. 1993. Kinetic PCR analysis: Real-time monitoring of DNA amplification reactions. Biotechnology 11:1026-1030.
12. Hoy, J. W., and Grisham, M. P. 1994. Sugarcane leaf scald distribution, symptomatology, and effect on yield in Louisiana. Plant Dis. 78:1083-1087.
13. Jaufeerally-Fakim, Y., Autrey, J. C., Toth, I., Daniels, M., and Dookun, A. 2002. Amplification polymorphism among Xanthomonas albilineans strains, using a single oligonucleotide primer. Eur. J. Plant Pathol. 108:121-130.
14. Koike, H. 1965. Aluminum-cap method for testing sugarcane varieties against leaf scald disease. Phytopathology 55:317-319.
15. Lopes, S. A., Damann, K. E., and Grelen, L. B. 2001. Xanthomonas albilineans diversity and identification based on rep-PCR fingerprints. Curr. Microbiol. 42:155-159.
16. Pan, Y. B., Grisham, M. P., and Burner, D. M. 1997. A polymerase chain reaction protocol for the detection of Xanthomonas albilineans, the causal agent of sugarcane leaf scald disease. Plant Dis. 81:189-194.
17. Pan, Y. B., Grisham, M. P., Burner, D. M., Legendre, B. L., and Wei, Q. 1999. Development of polymerase chain reaction primers highly specific for Xanthomonas albilineans, the causal bacterium of sugarcane leaf scald disease. Plant Dis. 83:218-222.
18. Renier, A., Vivien, E., Cociancich, S., Letourmy, P., Perrier, X., Rott, P. C., and Royer, M. 2007. Substrate specificity-conferring regions of the nonribosomal peptide synthetase adenylation domains involved in albicidin pathotoxin biosynthesis are highly conserved within the species Xanthomonas albilineans. Appl. Environ. Microbiol. 73:5523-5530.
19. Ricaud, C., and Ryan, C. C. 1989. Leaf scald. Pages 39-38 in: Diseases of Sugarcane. Major Diseases. C. Ricaud, B. T. Egan, A. G. Gillaspie, Jr., and C. G. Hughes, eds. Elsevier, Amsterdam.
20. Rott, P., Abel, M., Soupa, D., Feldman, P., and Letourmy, P. 1994. Population dynamics of Xanthomonas albilineans in sugarcane plants as determined with an antibiotic resistant mutant. Plant Dis. 78:241-247.
21. Rott, P., and Davis, M. J. 2000. Leaf scald. Pages 38-44 in: A Guide to Sugarcane Diseases. P. Rott, R. A. Bailey, J. C. Comstock, B. J. Croft, and A. S. Saumtally, eds. CIRAD-ISSCT, Paris.
22. Rott, P., Davis, M. J., and Baudin, P. 1994. Serological variability in Xanthomonas albilineans, causal agent of leaf scald disease of sugarcane. Plant Pathol. 43:344-349.
23. Rott, P., Mohamed, I. S., Klett, P., Soupa, D., de Saint-Albin, A., Feldmann, P., and Letourmy, P. 1997. Resistance to leaf scald disease is associated with limited colonization of sugarcane and wild relatives by Xanthomonas albilineans. Phytopathology 87:1202-1213.
24. Royer, M., Costet, L., Vivien, E., Bes, M., Cousin, A., Damais, A., Pieretti, I., Savin, A., Megessier, S., Viard, M., Frutos, R., Gabriel, D. W., and Rott, P. C. 2004. Albicidin pathotoxin produced by Xanthomonas albilineans is encoded by three large PKS and NRPS genes present in a gene cluster also containing several putative modifying, regulatory, and resistance genes. Mol. Plant-Microbe Interact. 17:414-427.
25. Saumtally, A. S., and Dookun, A. 2004. Leaf scald of sugarcane: a disease of worldwide importance. Pages 65-76 in: Sugarcane Pathology. Volume III: Bacterial and Nematode Diseases. G. P. Rao, A. S. Saumtally, and P. Rott, eds. Science Publishers, Inc., Enfield, NH.
26. Victoria, J. I., Guzmán Romero, M. L., Garcés, F. F., and Jaramillo, A. D. 1998. Pathogen-free seed cane production and its impact on a commercial scale. Proc. Int. Soc. Sugar Cane Technol. 23:390-397.
27. Wang, Z. K., Comstock, J., Hatziloukas, C. E., and Schaad, N. W. 1999. Comparison of PCR, BIO-PCR, DIA, ELISA and isolation on semi-selective medium for detection of Xanthomonas albilineans, the causal agent of leaf scald of sugarcane. Plant Pathol. 48:245-252.