Stock Identification

Fish Reproductive Biology: Implications for Assessment and Management

Volumn , Issue , 2009, Pages 230-253

  Begg, Gavin A ^a   Cadrin, Steven X ^b  

^a BUREAU OF RURAL SCIENCES   (Australia)

^b NOAA/UMass Cooperative Marine Education and Research Program   (United States)

Author keywords

Differences in spawning and hatch day distributions of eggs and larvae, demonstrating differential stock; Genetic variation and environmental conditions influencing phenotypic traits; Geographic information systems, enhancing power of distributional analyses; Morphological correlates to life history variation, in identifying phenotypic stocks; Population modeling of Atlantic bluefin tuna, illustrating role of tagging; Reproductive life history traits, in describing stock dynamics; Spatio temporal patterns, varying by life history stage; Stock identification

Indexed keywords

EID: 84889483586     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9781444312133.ch6     Document Type: Chapter

References (105)

1. Agardy, T.S. (1997) Marine Protected Areas and Ocean Conservation. Academic Press, San Diego.
2. Agardy, T.S. (2000) Information needs for marine protected areas: scientific and societal. Bulletin of Marine Science, 66, 875-88.
3. Altukhov, Y.P. (1981) The stock concept from the viewpoint of population genetics. Canadian Journal of Fisheries and Aquatic Sciences, 38, 1523-38.
4. Armstrong, M.P. & Cadrin, S.X. (2001) Morphometric variation among spawning groups of the Gulf of Maine-Georges Bank herring complex. In: F.J. Funk, J. Blackburn, D. Hay, A.J. Paul, R. Stephenson, R. Toresen & D. Witherell (Eds) Herring: Expectations for the New Millennium. pp. 575-90. University of Alaska Sea Grant, AK-SG-01-04, Fairbanks.
5. Bailey, K.M., Quinn, T.J. II, Bentzen, P. & Grant, W.S. (1999) Population structure and dynamics of walleye pollock, Theragra chalcogramma. Advances in Marine Biology, 37, 179-255.
6. Beacham, T.D. (1983) Variability in median size and age at sexual maturity of Atlantic cod, Gadus morhua, on the Scotian Shelf in the northwest Atlantic Ocean. Fishery Bulletin, 81, 303-21.
7. Begg, G.A. (1998) Reproductive biology of school mackerel (Scomberomorus queenslandicus) and spotted mackerel (S. munroi) in Queensland east-coast waters. Marine and Freshwater Research, 49, 261-70.
8. Begg, G.A. (2005) Life history parameters. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 119-50. Elsevier Academic Press, Burlington.
9. Begg, G.A., Friedland, K.D. & Pearce, J.B. (1999a) Stock identification and its role in stock assessment and fisheries management: an overview. Fisheries Research, 43, 1-8.
10. Begg, G.A., Hare, J.A.&Sheehan, D.D. (1999b) The role of life history parameters as indicators of stock structure. Fisheries Research, 43, 141-63.
11. Begg, G.A., Mapstone, B.D., Williams, A.J., Adams, S., Davies, C.R. & Lou, D.C. (2005) Multivariate life-history indices of exploited coral reef fish populations used to measure the performance of no-take zones in a marine protected area. Canadian Journal of Fisheries and Aquatic Sciences, 62, 679-92.
12. Begg, G.A.&Marteinsdottir, G. (2000) Spawning origins of pelagic juvenile cod Gadus morhua inferred from spatially explicit age distributions: potential influences on year-class strength and recruitment. Marine Ecology Progress Series, 202, 193-217.
13. Begg, G.A.&Waldman, J.R. (1999) An holistic approach to fish stock identification. Fisheries Research, 43, 35-44.
14. Bergenius, M.A.J. (2007) Stock Structure of a Coral Reef Fish, Plectropomus Leopardus: Identification and Implications for Harvest Strategy Evaluation. PhD Thesis, James Cook University, Queensland.
15. Beverton, R.J.H. & Holt, S.J. (1957) On the Dynamics of Exploited Fish Populations. Fisheries Investigation Series II, 19, MAFF, London. 533pp.
16. Bohnsack, J.A. (1998) Application of marine reserves to reef fisheries management. Australian Journal of Ecology, 23, 298-304.
17. Bohnsack, J.A. (2000) A comparison of the short-term impacts of no-take marine reserves and minimum size limits. Bulletin of Marine Science, 66, 635-50.
18. Bolles, K.L. (2006) Morphometric Discrimination of Atlantic Herring (Clupea Harengus) in the Northwestern Atlantic Ocean. MS Thesis, University of Massachusetts.
19. Booke, H.E. (1981) The conundrum of the stock concept-are nature and nurture definable in fishery science? Canadian Journal of Fisheries and Aquatic Sciences, 38, 1479-80.
20. Bradford, R.G. & Stephenson, R.L. (1992) Egg weight, fecundity, and gonad weight variability among northwest Atlantic herring (Clupea harengus) populations. Canadian Journal of Fisheries and Aquatic Sciences, 49, 2045-54.
21. Brown, B.E., Darcy, G.H. & Overholtz, W. (1987) Stock assessment/stock identification: an interactive process. In: H.E. Kumpf, R.N. Vaught, C.B. Grimes, A.G. Johnston & E.L. Nakamura (Eds) Proceedings of the Stock Identification Workshop 5-7 November 1985, Panama, City Beach, Florida. NOAATechnicalMemorandum NMFS-SEFC-199. pp. 1-23. United StatesGovernment Printing Office, Panama City.
22. Bruce, B.D., Evans, K., Sutton, C.A., Young, J.W. & Furlani, D.M. (2001) Influence of mesoscale oceanographic processes on larval distribution and stock structure in jackass morwong (Nemadactylus macropterus: Cheilodactylidae). ICES Journal of Marine Science, 58, 1072-80.
23. Cadrin, S.X. (2003) Stock Structure of Yellowtail Flounder off the Northeastern United States. PhD Thesis, University of Rhode Island.
24. Cadrin, S.X. (2005) Morphometric landmarks. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 153-72. Elsevier Academic Press, Burlington.
25. Cadrin, S.X. & Friedland, K.D. (1999) The utility of image processing techniques for morphometric analysis and stock identification. Fisheries Research, 43, 129-39.
26. Cadrin, S.X. & Friedland, K.D. (2005) Morphometric outlines. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 173-83. Elsevier Academic Press, Burlington.
27. Cadrin, S.X., Friedland, K.D. & Waldman, J.R. (Eds) (2005) Stock Identification Methods. Applications in Fishery Science. Elsevier Academic Press, Burlington.
28. Campana, S.E., Frank, K.T., Hurley, P.C.F., Koeller, P.A., Page, F.H. & Smith, P.C. (1989). Survival and abundance of young Atlantic cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) as indicators of year class strength. Canadian Journal of Fisheries and Aquatic Sciences, 46(Suppl. 1), 171-82.
29. Carvalho, G.R. & Hauser, L. (1994) Molecular genetics and the stock concept in fisheries. Reviews in Fish Biology and Fisheries, 4, 326-50.
30. Casselman, J.M., Collins, J.J., Crossman, E.J., Ihssen, P.E. & Spangler, G.R. (1981) Lake whitefish (Coregonus clupeaformis) in the Great Lakes region. Canadian Journal of Fisheries and Aquatic Sciences, 38, 1772-89.
31. Clark, S.H., Overholtz, W.H. & Hennemuth, R.C. (1982) Review and assessment of the Georges Bank and Gulf of Maine haddock fishery. Journal of the Northwest Atlantic Fishery Science, 3, 1-27.
32. Coyle, T. (1998) Stock identification and fisheries management: the importance of using several methods in a stock identification study. In: D.A. Hancock (Ed.) Taking Stock: Defining and Managing Shared Resources. pp. 173-82. Australian Society for Fishery Biology, Sydney.
33. Cushing, D.H. (1969) The regularity of the spawning season of some fishes. Journal du Conseil International pour l'Exploration de la Mer, 33, 81-97.
34. Cushing, D.H. (1990) Plankton production and year-class strength in fish populations: an update of the match/mismatch hypothesis. Advances in Marine Biology, 26, 249-93.
35. Dawson, P. (1994) The Stock Structure of Bering Sea Walleye Pollock (Theragra Chalcogramma). MSc Thesis, University of Washington.
36. DeYoung, B. & Rose, G.A. (1993) On recruitment and distribution of Atlantic cod (Gadus morhua) off Newfoundland. Canadian Journal of Fisheries and Aquatic Sciences, 50, 2729-41.
37. Dizon, A.E., Lockyer, C., Perrin,W.F., Demaster, D.P. & Sisson, J. (1992) Rethinking the stock concept: a phylogenetic approach. Conservation Biology, 6, 24-36.
38. DOC (Department of Commerce) (1996) Magnuson-Stevens Fishery Conservation and Management Act as amended through October 11, 1996. NOAA Tech. Mem. NMFS-F/SPO-23.
39. Fabrizio, M.C. (2005) Experimental design and sampling strategies for mixed-stock analysis. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 467-98. Elsevier Academic Press, Burlington.
40. Field, J.C. & Ralston, S. (2005) Spatial variability in rockfish (Sebastes spp.) recruitment events in the California Current System. Canadian Journal of Fisheries and Aquatic Sciences, 62, 2199-210.
41. Friedland, K.D., Esteves, C., Hansen, L.P. & Lund, R.A. (1994) Discrimination of Norwegian farmed, ranched and wild-origin Atlantic salmon, Salmo salar L., by image processing. Fisheries Management and Ecology, 1, 117-28.
42. Gaughan, D.J., White, K.V. & Fletcher,W.J. (2001) The links between functionally distinct adult assemblages of Sardinops sagax: larval advection across management boundaries. ICES Journal of Marine Science, 58, 597-606.
43. Gauldie, R.W. (1988) Tagging and genetically isolated stocks of fish: a test of one stock hypothesis and the development of another. Journal of Applied Ichthyology, 4, 168-73.
44. Griffiths, M.H. (1997) The life history and stock separation of silver kob, Argyrosomus inodorus in South African waters. Fishery Bulletin, 95, 47-67.
45. Grimes, C.B., Johnson, A.G. & Fable, W.A., Jr (1987) Delineation of king mackerel (Scomberomorus cavalla) stocks along the US east-coast and in the Gulf of Mexico. In: H.E. Kumpf, R.N. Vaught, C.B. Grimes, A.G. Johnston & E.L. Nakamura (Eds) Proceedings of the Stock IdentificationWorkshop 5-7 November 1985, Panama, City Beach, Florida. NOAA Technical Memorandum NMFS-SEFC-199. pp. 186-7. United States Government Printing Office, Panama City.
46. Haddon, M. (2001) Modelling and Quantitative Methods in Fisheries. Chapman and Hall, Boca Raton.
47. Hammer, C. & Zimmerman, C. (2005) The role of stock identification in formulating fishery management advice. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 631-58. Elsevier Academic Press, Burlington.
48. Hanski, I. (1991) Single-species metapopulation dynamics: concepts, models and observations. Biological Journal of the Linnean Society, 42, 17-38.
49. Hanski, I. & Simberloff, D. (1997) The metapopulation approach, its history, conceptual domain, and application to conservation. In: I. Hanski & M.E. Gilpin (Eds) Metapopulation Biology: Ecology, Genetics and Evolution. pp. 5-26. Academic Press, London.
50. Hare, J.A. (2005) The use of early life stages in stock identification studies. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 89-117. Elsevier Academic Press, Burlington.
51. Hare, J.A. & Cowen, R.K. (1993) Ecological and evolutionary implications of the larval transport and reproductive strategy of bluefish Pomatomus saltatrix. Marine Ecology Progress Series, 98, 1-16.
52. Harrison, S. & Taylor, A.D. (1997) Empirical evidence for metapopulation dynamics. In: I. Hanski & M.E. Gilpin (Eds) Metapopulation Biology: Ecology, Genetics and Evolution. pp. 27-39. Academic Press, London.
53. Heath, M.R. (1992) Field investigations of the early life stages of marine fish. Advances in Marine Biology, 28, 1-174.
54. Hilborn, R. & Walters, C.J. (1992) Quantitative Fisheries Stock Assessment. Choice, Dynamics and Uncertainty. Chapman and Hall, London.
55. Hjort, J. (1914) Fluctuations in the great fisheries of northern Europe viewed in the light of biological research. Rapports et Procès-verbaux des Réunions, Conseil International pour l'Exploration de la Mer, 20, 1-228.
56. Hohn, A.A. (1997) Design for a Multiple-Method Approach to Determine Stock Structure of Bottlenose Dolphins in the Mid-Atlantic. NOAA Technical Memorandum NMFS-SEFSC 401.
57. Horrall, R.M. (1981) Behavioural stock isolating mechanisms in Great Lake fishes with special reference to homing and imprinting. Canadian Journal of Fisheries and Aquatic Sciences, 38, 1481-96.
58. Hutchings, J.A., Myers, R.A. & Lilly, G.R. (1993) Geographic variation in the spawning of Atlantic cod, Gadus morhua, in the northwest Atlantic. Canadian Journal of Fisheries and Aquatic Sciences, 50, 2457-67.
59. Ihssen, P.E., Booke, H.E., Casselman, J.M., McGlade, J.M., Payne, N.R. & Utter, F.M. (1981) Stock identification: materials and methods. Canadian Journal of Fisheries and Aquatic Sciences, 38, 1838-55.
60. Iles, T.D.&Sinclair, M. (1982) Atlantic herring: stock discreteness and abundance. Science, 215, 627-33.
61. Koslow, J.A. (1984) Recruitment patterns in northwest Atlantic fish stocks. Canadian Journal of Fisheries and Aquatic Sciences, 41, 1722-9.
62. Koslow, J.A., Thompson, K.R. & Silvert, W. (1987) Recruitment of northwest Atlantic cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) stocks: influence of stock size and climate. Canadian Journal of Fisheries and Aquatic Sciences, 44, 26-39.
63. Kritzer, J.P. (2001) Patterns of Spatial Variation in the Population Biology of a Coral Reef Fish and Implications for Metapopulation Dynamics. PhD Thesis, James Cook University, Queensland.
64. Kutkuhn, J.H. (1981) Stock definition as a necessary basis for cooperative management of Great Lakes fish resources. Canadian Journal of Fisheries and Aquatic Sciences, 38, 1476-8.
65. MacKenzie, K. & Abaunza, P. (1998) Parasites as biological tags for stock discrimination of marine fish: a guide to procedures and methods. Fisheries Research, 38, 45-56.
66. Marteinsdottir, G. & Begg, G.A. (2002) Essential relationships incorporating the influence of age, size and condition on variables required for estimation of reproductive potential in Atlantic cod Gadus morhua stocks. Marine Ecology Progress Series, 235, 235-56.
67. Marteinsdottir, G., Gudmundsdottir, A., Thorsteinsson, V. & Stefánsson, G. (2000a) Spatial variation in abundance, size composition and viable egg production of spawning cod (Gadus morhua L.) in Icelandic waters. ICES Journal of Marine Science, 57, 824-30.
68. Marteinsdottir, G., Gunnarsson, B. & Suthers, I.M. (2000b) Spatial variation in hatch date distributions and origin of pelagic juvenile cod in Icelandic waters. ICES Journal of Marine Science, 57, 1182-95.
69. McBride, M.M. & Brown, B.E. (1980) The Status of the Marine Fishery Resources of the Northeastern United States. NOAA Technical Memorandum. NMFS-F/NEC-5.
70. Mertz, G. & Myers, R.A. (1994) Match/mismatch predictions of spawning duration versus recruitment variability. Fisheries Oceanography, 3, 236-45.
71. Myers, R.A., Barrowman, N.J., Hutchings, J.A. & Rosenberg, A.A. (1995) Population dynamics of exploited fish stocks at low population levels. Science, 269, 1106-8.
72. National Research Council (NRC) (1994) An Assessment of Atlantic Bluefin Tuna. National Academy Press, Washington DC.
73. O'Boyle, R.N., Sinclair, M., Conover, R.J., Mann, K.H. & Kohler, A.C. (1984) Temporal and spatial distribution of ichthyoplankton communities of the Scotian Shelf in relation to biological, hydrological, and physiographic features. Rapports et Procès-verbaux des Réunions, Conseil International pour l'Exploration de la Mer, 183, 27-40.
74. O'Brien, L. (1990) Effects of Fluctuations in Stock Abundance upon Life History Parameters of Atlantic Cod, Gadus Morhua, for the 1970-1987 Year Classes from Georges Bank and the Gulf Of Maine. MSc Thesis, University of Washington.
75. Overholtz,W.J. & Friedland, K.D. (2002) Recovery of the Gulf of Maine-Georges Bank Atlantic herring (Clupea harengus) complex: perspectives based on bottom trawl survey data. Fishery Bulletin, 100, 593-608.
76. Page, F.H. & Frank, K.T. (1989) Spawning time and egg stage duration in northwest Atlantic haddock (Melanogrammus aeglefinus) stocks with emphasis on Georges and Browns Bank. Canadian Journal of Fisheries and Aquatic Sciences, 46(Suppl. 1), 68-81.
77. Page, F.H., Sinclair, M., Naimie, C.E., Loder, J.W., Losier, R.J., Berrien, P.L. & Lough, R.G. (1999) Cod and haddock spawning on Georges Bank in relation to water residence times. Fisheries Oceanography, 8, 212-26.
78. Palumbi, S.R. (1994) Genetic divergence, reproductive isolation, and marine speciation. Annual Review of Ecology and Systematics, 25, 547-72.
79. Parrish, R.H., Nelson, C.S. & Bakiun, A. (1981) Transport mechanisms and reproductive success of fishes in the California Current. Biological Oceanography, 1, 175-203.
80. Pawson, M.G. & Jennings, S. (1996) A critique of methods for stock identification in marine capture fisheries. Fisheries Research, 25, 203-17.
81. Polacheck, T. (1990) Year around closed areas as a management tool. Natural Resource Modeling, 4, 327-54.
82. Ricker, W.E. (1954) Stock and recruitment. Journal of the Fisheries Research Board of Canada, 11, 559-623.
83. Ricker, W.E. (1981) Changes in the average size and average age of Pacific salmon. Canadian Journal of Fisheries and Aquatic Sciences, 38, 1636-56.
84. Roberts, C.M. & Polunin, N.V.C. (1991) Are marine reserves effective in management of reef fisheries? Reviews in Fish Biology and Fisheries, 1, 65-91.
85. Rochet, M.-J. (2000) May life history traits be used as indices of population viability? Journal of Sea Research, 44, 145-57.
86. Secor, D.H. (2005) Fish migration and the unit stock: three formative debates. In: S.X. Cadrin, K.D. Friedland & J.R. Waldman (Eds) Stock Identification Methods. Applications in Fishery Science. pp. 17-44. Elsevier Academic Press, Burlington.
87. Sinclair, M. (1988) Marine Populations: An Essay on Population Regulation and Speciation. University of Washington Press, Seattle.
88. Sinclair, M. & Tremblay, M.J. (1984) Timing of spawning of Atlantic herring (Clupea harengus) populations and the match-mismatch theory. Canadian Journal of Fisheries and Aquatic Sciences, 41, 1055-65.
89. Smedbol, R.K. & Stephenson, R.L. (2001) The importance of managing within-species diversity in cod and herring fisheries of the north-western Atlantic. Journal of Fish Biology, 59(Suppl. A), 109-28.
90. Smedbol, R.K. & Wroblewski, J.S. (2000) Metapopulation Theory and Northern Cod Population Structure: Interdependency of Subpopulations in Recovery of a Groundfish Population. Canadian Stock Assessment Secretariat Research Document 2000/087.
91. Smith, P.J., Francis, R.I.C.C. & McVeagh, M. (1991) Loss of genetic diversity due to fishing pressure. Fisheries Research, 10, 309-16.
92. Smith, P.J., Jamieson, A. & Birley, A.J. (1990) Electrophoretic studies and the stock concept in marine teleosts. Journal du Conseil International pour l'Exploration de la Mer, 47, 231-45.
93. Stephenson, R.L. (1991) Stock discreteness in Atlantic herring: a review of arguments for and against. In: V. Wespestad, J. Collie & E. Collie (Eds) Proceedings of the International Herring Symposium, Anchorage, Alaska, October 23-25, 1990 (9th Lowell Wakefield Fisheries Symposium). pp. 659-66. University of Alaska, Fairbanks.
94. Stephenson, R.L. (1999) Stock complexity in fisheries management: a perspective of emerging issues related to population sub-units. Fisheries Research, 43, 247-9.
95. Stephenson, R.L., Clark, K.J., Power, M.J., Fife, F.J. & Melvin, G.D. (2001) Herring stock structure, stock discreteness, and biodiversity. In: F. Funk, J. Blackburn, D. Hay, A.J. Paul, R. Stephenson, R. Toresen & D. Witherell (Eds) Herring: Expectations for a New Millenium. pp. 559-71. University of Alaska Sea Grant, Ak-SG-01-04, Fairbanks.
96. Swain, A., Parrish, B.B.&Horsted, S.A. (1980) Tagging of salmon smolts in European rivers with special references to recaptures offWest Greenland in 1972 and earlier years. Rapports et Procès-verbaux des Réunions, Conseil International pour l'Exploration de la Mer, 176, 93-113.
97. Thompson, K.R. & Page, F.H. (1989) Detecting synchrony of recruitment using short, autocorrelated time series. Canadian Journal of Fisheries and Aquatic Sciences, 46, 1831-8.
98. Thorrold, S.R., Latkoczy, C., Swart, P.K. & Jones, C.M. (2001) Natal homing in a marine fish metapopulation. Science, 291, 297-9.
99. Trippel, E.A. (1999) Estimation of stock reproductive potential: history and challenges for Canadian Atlantic gadoid stock assessments. Journal of the Northwest Atlantic Fishery Science, 25, 61-81.
100. Tyler, J.A.&Rose, K.A. (1994) Individual variability and spatial heterogeneity in fish population models. Reviews in Fish Biology and Fisheries, 4, 91-123.
101. Waldman, J.R. (1999) The importance of comparative studies in stock analysis. Fisheries Research, 43, 237-46.
102. Waldman, J.R. & Fabrizio, M.C. (1994) Problems of stock definition in estimating relative contributions of Atlantic striped bass to the coastal fishery. Transactions of the American Fisheries Society, 123, 766-78.
103. Waldman, J.R., Grossfield, J. & Wirgin, I. (1988) Review of stock discrimination techniques for striped bass. North American Journal of Fisheries Management, 8, 410-25.
104. Waples, R.S. (1998) Separating the wheat from the chaff: patterns of genetic differentiation in high gene flow species. Journal of Heredity, 89, 438-50.
105. Waples, R.S., Winans, G.A., Utter, F.M. & Mahnken, C. (1990) Genetic approaches to the management of Pacific salmon. Fisheries, 15, 19-25.