-
1
-
-
0003238763
-
The methanotrophs - the families Methylococcaceae and Methylocystaceae
-
(Chapter 3.1.14), M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, E. Stackebrandt (Eds.)
-
Bowman J. The methanotrophs - the families Methylococcaceae and Methylocystaceae. The Prokaryotes 2006, 266-289. (Chapter 3.1.14). third ed. M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, E. Stackebrandt (Eds.).
-
(2006)
The Prokaryotes
, pp. 266-289
-
-
Bowman, J.1
-
2
-
-
0023162881
-
Symbiosis of methylotrophic bacteria and deep-sea mussels
-
Cavanaugh C.M., Levering P.R., Maki J.S., Mitchell R., Lidstrom M.E. Symbiosis of methylotrophic bacteria and deep-sea mussels. Nature 1987, 325:346-348.
-
(1987)
Nature
, vol.325
, pp. 346-348
-
-
Cavanaugh, C.M.1
Levering, P.R.2
Maki, J.S.3
Mitchell, R.4
Lidstrom, M.E.5
-
3
-
-
0022554532
-
A methanotrophic marine molluscan (Bivalvia, Mytilidae) symbiosis - mussels fueled by gas
-
Childress J.J., Fisher C.R., Brooks J.M., Kennicutt M.C., Bidigare R., Anderson A.E. A methanotrophic marine molluscan (Bivalvia, Mytilidae) symbiosis - mussels fueled by gas. Science 1986, 233:1306-1308.
-
(1986)
Science
, vol.233
, pp. 1306-1308
-
-
Childress, J.J.1
Fisher, C.R.2
Brooks, J.M.3
Kennicutt, M.C.4
Bidigare, R.5
Anderson, A.E.6
-
5
-
-
79955015975
-
DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment
-
Dumont M.G., Pommerenke B., Casper P., Conrad R. DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment. Environ. Microbiol. 2011, 13:1153-1167.
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 1153-1167
-
-
Dumont, M.G.1
Pommerenke, B.2
Casper, P.3
Conrad, R.4
-
6
-
-
33846921231
-
Synthetic ecology: a model system for cooperation
-
Dunham M.J. Synthetic ecology: a model system for cooperation. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:1741-1742.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 1741-1742
-
-
Dunham, M.J.1
-
7
-
-
84863920287
-
Microbial interactions: from networks to models
-
Faust K., Raes J. Microbial interactions: from networks to models. Nat. Rev. Microbiol. 2012, 10:538-550.
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, pp. 538-550
-
-
Faust, K.1
Raes, J.2
-
8
-
-
26944454497
-
ROC graphs: notes and practical considerations for researchers
-
Fawcett T. ROC graphs: notes and practical considerations for researchers. Machine Learn. 2004, 1-38.
-
(2004)
Machine Learn.
, pp. 1-38
-
-
Fawcett, T.1
-
9
-
-
84455174807
-
Competitive and cooperative metabolic interactions in bacterial communities
-
Freilich S., Zarecki R., Eilam O., Segal E.S., Henry C.S., Kupiec M., et al. Competitive and cooperative metabolic interactions in bacterial communities. Nat. Commun. 2011, 2:589.
-
(2011)
Nat. Commun.
, vol.2
, pp. 589
-
-
Freilich, S.1
Zarecki, R.2
Eilam, O.3
Segal, E.S.4
Henry, C.S.5
Kupiec, M.6
-
10
-
-
66149150877
-
Microbial community structure and its functional implications
-
Fuhrman J.A. Microbial community structure and its functional implications. Nature 2009, 459:193-199.
-
(2009)
Nature
, vol.459
, pp. 193-199
-
-
Fuhrman, J.A.1
-
11
-
-
84866459051
-
Predicting drug-target interactions from chemical and genomic kernels using Bayesian matrix factorization
-
Gönen M. Predicting drug-target interactions from chemical and genomic kernels using Bayesian matrix factorization. Bioinformatics 2012, 28:2304-2310.
-
(2012)
Bioinformatics
, vol.28
, pp. 2304-2310
-
-
Gönen, M.1
-
13
-
-
84859872663
-
Miniaturized extinction culturing is the preferred strategy for rapid isolation of fast-growing methane-oxidizing bacteria
-
Hoefman S., van der Ha D., De Vos P., Boon N., Heylen K. Miniaturized extinction culturing is the preferred strategy for rapid isolation of fast-growing methane-oxidizing bacteria. Microb. Biotechnol. 2012, 5:368-378.
-
(2012)
Microb. Biotechnol.
, vol.5
, pp. 368-378
-
-
Hoefman, S.1
van der Ha, D.2
De Vos, P.3
Boon, N.4
Heylen, K.5
-
14
-
-
0031680032
-
Growth characteristics and metabolic activities of the methanotrophic-heterotrophic groundwater community
-
Hrsak D., Begonja A. Growth characteristics and metabolic activities of the methanotrophic-heterotrophic groundwater community. J. Appl. Microbiol. 1998, 85:448-456.
-
(1998)
J. Appl. Microbiol.
, vol.85
, pp. 448-456
-
-
Hrsak, D.1
Begonja, A.2
-
15
-
-
0033778868
-
Possible interactions within a methanotrophic-heterotrophic groundwater community able to transform linear alkylbenzenesulfonates
-
Hrsak D., Begonja A. Possible interactions within a methanotrophic-heterotrophic groundwater community able to transform linear alkylbenzenesulfonates. Appl. Environ. Microbiol. 2000, 66:4433-4439.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 4433-4439
-
-
Hrsak, D.1
Begonja, A.2
-
16
-
-
67049164166
-
Collaborative filtering for implicit feedback datasets
-
D. Gunopulos, F. Turini, C. Zaniolo, N. Ramakrishnan, X.D. Wu (Eds.)
-
Hu Y.F., Koren Y., Volinsky C. Collaborative filtering for implicit feedback datasets. Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008) 2008, 263-272. D. Gunopulos, F. Turini, C. Zaniolo, N. Ramakrishnan, X.D. Wu (Eds.).
-
(2008)
Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008)
, pp. 263-272
-
-
Hu, Y.F.1
Koren, Y.2
Volinsky, C.3
-
17
-
-
1142269619
-
Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing
-
Hutchens E., Radajewski S., Dumont M.G., McDonald I.R., Murrell J.C. Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing. Environ. Microbiol. 2004, 6:111-120.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 111-120
-
-
Hutchens, E.1
Radajewski, S.2
Dumont, M.G.3
McDonald, I.R.4
Murrell, J.C.5
-
18
-
-
83155193043
-
Stimulation of methanotrophic growth in cocultures by cobalamin excreted by rhizobia
-
Iguchi H., Yurimoto H., Sakai Y. Stimulation of methanotrophic growth in cocultures by cobalamin excreted by rhizobia. Appl. Environ. Microbiol. 2011, 77:8509-8515.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 8509-8515
-
-
Iguchi, H.1
Yurimoto, H.2
Sakai, Y.3
-
19
-
-
0028048277
-
Associations of methanotrophs with the roots and rhizomes of aquatic vegetation
-
King G.M. Associations of methanotrophs with the roots and rhizomes of aquatic vegetation. Appl. Environ. Microbiol. 1994, 60:3220-3227.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 3220-3227
-
-
King, G.M.1
-
20
-
-
77956293666
-
Global prevalence of methane oxidation by symbiotic bacteria in peat-moss ecosystems
-
Kip N., van Winden J.F., Pan Y., Bodrossy L., Reichart G.J., Smolders A.J.P., et al. Global prevalence of methane oxidation by symbiotic bacteria in peat-moss ecosystems. Nat. Geosci. 2010, 3:617-621.
-
(2010)
Nat. Geosci.
, vol.3
, pp. 617-621
-
-
Kip, N.1
van Winden, J.F.2
Pan, Y.3
Bodrossy, L.4
Reichart, G.J.5
Smolders, A.J.P.6
-
21
-
-
78649677586
-
Environments that induce synthetic microbial ecosystems
-
Klitgord N., Segrè D. Environments that induce synthetic microbial ecosystems. PLoS Comput. Biol. 2010, 6:e1001002.
-
(2010)
PLoS Comput. Biol.
, vol.6
-
-
Klitgord, N.1
Segrè, D.2
-
22
-
-
84856119548
-
Ecoinformatics: supporting ecology as a data-intensive science
-
Michener W.K., Jones M.B. Ecoinformatics: supporting ecology as a data-intensive science. Trends Ecol. Evol. 2012, 27:85-93.
-
(2012)
Trends Ecol. Evol.
, vol.27
, pp. 85-93
-
-
Michener, W.K.1
Jones, M.B.2
-
23
-
-
34248650946
-
Denitrification with methane as external carbon source
-
Modin O., Fukushi K., Yamamoto K. Denitrification with methane as external carbon source. Water Res. 2007, 41:2726-2738.
-
(2007)
Water Res.
, vol.41
, pp. 2726-2738
-
-
Modin, O.1
Fukushi, K.2
Yamamoto, K.3
-
24
-
-
37849021587
-
Microbial interactions within a cheese microbial community
-
Mounier J., Monnet C., Vallaeys T., Arditi R., Sarthou A.-S., Hélias A., Irlinger F. Microbial interactions within a cheese microbial community. Appl. Environ. Microbiol. 2008, 74:172-181.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 172-181
-
-
Mounier, J.1
Monnet, C.2
Vallaeys, T.3
Arditi, R.4
Sarthou, A.-S.5
Hélias, A.6
Irlinger, F.7
-
25
-
-
35948978521
-
A methane-driven microbial food web in a wetland rice soil
-
Murase J., Frenzel P. A methane-driven microbial food web in a wetland rice soil. Environ. Microbiol. 2007, 9:3025-3034.
-
(2007)
Environ. Microbiol.
, vol.9
, pp. 3025-3034
-
-
Murase, J.1
Frenzel, P.2
-
26
-
-
77953873482
-
Modelling the morphology of migrating bacterial colonies
-
Nishiyama A., Tokihiro T., Badoual M., Grammaticos B. Modelling the morphology of migrating bacterial colonies. J. Phys. D 2010, 239:1573-1580.
-
(2010)
J. Phys. D
, vol.239
, pp. 1573-1580
-
-
Nishiyama, A.1
Tokihiro, T.2
Badoual, M.3
Grammaticos, B.4
-
27
-
-
25644458211
-
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
-
Overbeek R., Begley T., Butler R.M., Choudhuri J.V., Chuang H.-Y., Cohoon M., et al. The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res. 2005, 33:5691-5702.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 5691-5702
-
-
Overbeek, R.1
Begley, T.2
Butler, R.M.3
Choudhuri, J.V.4
Chuang, H.-Y.5
Cohoon, M.6
-
28
-
-
70349770739
-
Constraints-based genome-scale metabolic simulation for systems metabolic engineering
-
Park J.M., Kim T.Y., Lee S.Y. Constraints-based genome-scale metabolic simulation for systems metabolic engineering. Biotechnol. Adv. 2009, 27:979-988.
-
(2009)
Biotechnol. Adv.
, vol.27
, pp. 979-988
-
-
Park, J.M.1
Kim, T.Y.2
Lee, S.Y.3
-
29
-
-
1242283921
-
Use of genome-scale microbial models for metabolic engineering
-
Patil K.R., Akesson M., Nielsen J. Use of genome-scale microbial models for metabolic engineering. Curr. Opin. Biotechnol. 2004, 15:64-69.
-
(2004)
Curr. Opin. Biotechnol.
, vol.15
, pp. 64-69
-
-
Patil, K.R.1
Akesson, M.2
Nielsen, J.3
-
30
-
-
77953193381
-
Methanotrophic symbioses in marine invertebrates
-
Petersen J.M., Dubilier N. Methanotrophic symbioses in marine invertebrates. Environ. Microbiol. Rep. 2009, 1:319-335.
-
(2009)
Environ. Microbiol. Rep.
, vol.1
, pp. 319-335
-
-
Petersen, J.M.1
Dubilier, N.2
-
31
-
-
0032549541
-
A new combined differential-discrete cellular automaton approach for biofilm modeling: application for growth in gel beads
-
Picioreanu C., van Loosdrecht M.C., Heijnen J.J. A new combined differential-discrete cellular automaton approach for biofilm modeling: application for growth in gel beads. Biotechnol. Bioeng. 1998, 57:718-731.
-
(1998)
Biotechnol. Bioeng.
, vol.57
, pp. 718-731
-
-
Picioreanu, C.1
van Loosdrecht, M.C.2
Heijnen, J.J.3
-
32
-
-
43249113326
-
Predicting co-complexed protein pairs from heterogeneous data
-
Qiu J., Noble W.S. Predicting co-complexed protein pairs from heterogeneous data. PLoS Comput. Biol. 2008, 4:e1000054.
-
(2008)
PLoS Comput. Biol.
, vol.4
-
-
Qiu, J.1
Noble, W.S.2
-
33
-
-
77953026721
-
Cross-feeding of methane carbon among bacteria on rice roots revealed by DNA-stable isotope probing
-
Qiu Q., Conrad R., Lu Y. Cross-feeding of methane carbon among bacteria on rice roots revealed by DNA-stable isotope probing. Environ. Microbiol. Rep. 2009, 1:355-361.
-
(2009)
Environ. Microbiol. Rep.
, vol.1
, pp. 355-361
-
-
Qiu, Q.1
Conrad, R.2
Lu, Y.3
-
34
-
-
24144437435
-
Methanotrophic symbionts provide carbon for photosynthesis in peat bogs
-
Raghoebarsing A.A., Smolders A.J.P., Schmid M.C., Rijpstra W.I.C., Wolters-Arts M., Derksen J., et al. Methanotrophic symbionts provide carbon for photosynthesis in peat bogs. Nature 2005, 436:1153-1156.
-
(2005)
Nature
, vol.436
, pp. 1153-1156
-
-
Raghoebarsing, A.A.1
Smolders, A.J.P.2
Schmid, M.C.3
Rijpstra, W.I.C.4
Wolters-Arts, M.5
Derksen, J.6
-
35
-
-
79954939586
-
Microbial Resource Management revisited: successful parameters and new concepts
-
Read S., Marzorati M., Guimaraes B.C., Boon N. Microbial Resource Management revisited: successful parameters and new concepts. Appl. Microbiol. Biotechnol. 2011, 90:861-871.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.90
, pp. 861-871
-
-
Read, S.1
Marzorati, M.2
Guimaraes, B.C.3
Boon, N.4
-
36
-
-
34548305141
-
Mobility promotes and jeopardizes biodiversity in rock-paper-scissors games
-
Reichenbach T., Mobilia M., Frey E. Mobility promotes and jeopardizes biodiversity in rock-paper-scissors games. Nature 2007, 448:1046-1049.
-
(2007)
Nature
, vol.448
, pp. 1046-1049
-
-
Reichenbach, T.1
Mobilia, M.2
Frey, E.3
-
37
-
-
83755163018
-
Detecting novel associations in large data sets
-
Reshef D.N., Reshef Y.a., Finucane H.K., Grossman S.R., McVean G., Turnbaugh P.J., et al. Detecting novel associations in large data sets. Science 2011, 334:1518-1524.
-
(2011)
Science
, vol.334
, pp. 1518-1524
-
-
Reshef, D.N.1
Reshef, Y.2
Finucane, H.K.3
Grossman, S.R.4
McVean, G.5
Turnbaugh, P.J.6
-
38
-
-
34249847958
-
PcaMethods - a bioconductor package providing PCA methods for incomplete data
-
Stacklies W., Redestig H., Scholz M., Walther D., Selbig J. pcaMethods - a bioconductor package providing PCA methods for incomplete data. Bioinformatics 2007, 23:1164-1167.
-
(2007)
Bioinformatics
, vol.23
, pp. 1164-1167
-
-
Stacklies, W.1
Redestig, H.2
Scholz, M.3
Walther, D.4
Selbig, J.5
-
39
-
-
77954418047
-
A survey of collaborative filtering techniques
-
Su X., Khoshgoftaar T.M. A survey of collaborative filtering techniques. Adv. Artif. Intel. 2009, 2009:1-19.
-
(2009)
Adv. Artif. Intel.
, vol.2009
, pp. 1-19
-
-
Su, X.1
Khoshgoftaar, T.M.2
-
40
-
-
0038959172
-
Probabilistic principal component analysis
-
Tipping M., Bishop C. Probabilistic principal component analysis. J. R. Stat. Soc. 1997, 3:611-622.
-
(1997)
J. R. Stat. Soc.
, vol.3
, pp. 611-622
-
-
Tipping, M.1
Bishop, C.2
-
41
-
-
79954628781
-
A sustainable, carbon neutral methane oxidation by a partnership of methane oxidizing communities and microalgae
-
van der Ha D., Bundervoet B., Verstraete W., Boon N. A sustainable, carbon neutral methane oxidation by a partnership of methane oxidizing communities and microalgae. Water Res. 2011, 45:2845-2854.
-
(2011)
Water Res.
, vol.45
, pp. 2845-2854
-
-
van der Ha, D.1
Bundervoet, B.2
Verstraete, W.3
Boon, N.4
-
42
-
-
84877130263
-
Selection of associated heterotrophs by methane-oxidizing bacteria at different copper concentrations
-
van der Ha D., Vanwonterghem I., Hoefman S., De Vos P., Boon N. Selection of associated heterotrophs by methane-oxidizing bacteria at different copper concentrations. Antonie Leeuwenhoek 2012, 103:527-537.
-
(2012)
Antonie Leeuwenhoek
, vol.103
, pp. 527-537
-
-
van der Ha, D.1
Vanwonterghem, I.2
Hoefman, S.3
De Vos, P.4
Boon, N.5
-
43
-
-
42149134851
-
A new pairwise kernel for biological network inference with support vector machines
-
Vert J., Qiu J., Noble W.S. A new pairwise kernel for biological network inference with support vector machines. BMC Bioinform. 2007, 8. 10.1186/1471-2105-8-S10-S8.
-
(2007)
BMC Bioinform.
, vol.8
-
-
Vert, J.1
Qiu, J.2
Noble, W.S.3
|