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Volumn 48, Issue 1, 2014, Pages 179-189

Identification of water pathogens by Raman microspectroscopy

Author keywords

Identification; Legionella species; Raman spectroscopy; Water pathogens

Indexed keywords

ESCHERICHIA COLI; PATHOGENS; SUPPORT VECTOR MACHINES;

EID: 84888431615     PISSN: 00431354     EISSN: 18792448     Source Type: Journal    
DOI: 10.1016/j.watres.2013.09.030     Document Type: Article
Times cited : (85)

References (55)
  • 1
    • 53849096988 scopus 로고    scopus 로고
    • Long-term survival of Legionella pneumophila in the viable but nonculturable state after monochloramine treatment
    • Alleron L., Merlet N., Lacombe C., Frere J. Long-term survival of Legionella pneumophila in the viable but nonculturable state after monochloramine treatment. Current Microbiol. 2008, 57(5):497-502.
    • (2008) Current Microbiol. , vol.57 , Issue.5 , pp. 497-502
    • Alleron, L.1    Merlet, N.2    Lacombe, C.3    Frere, J.4
  • 3
    • 0029679924 scopus 로고    scopus 로고
    • Legionella waltersii sp. nov. and an unnamed Legionella genomospecies isolated from water in Australia
    • Benson R.F., Thacker W.L., Daneshvar M.I., Brenner D.J. Legionella waltersii sp. nov. and an unnamed Legionella genomospecies isolated from water in Australia. Int. J. Syst. Bacteriol. 1996, 46(3):631-634.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , Issue.3 , pp. 631-634
    • Benson, R.F.1    Thacker, W.L.2    Daneshvar, M.I.3    Brenner, D.J.4
  • 5
    • 80052542236 scopus 로고    scopus 로고
    • How to pre-process Raman spectra for reliable and stable models?
    • Bocklitz T., Walter A., Hartmann K., Rösch P., Popp J. How to pre-process Raman spectra for reliable and stable models?. Anal. Chim. Acta 2011, 704(1):47-56.
    • (2011) Anal. Chim. Acta , vol.704 , Issue.1 , pp. 47-56
    • Bocklitz, T.1    Walter, A.2    Hartmann, K.3    Rösch, P.4    Popp, J.5
  • 9
    • 79955702502 scopus 로고    scopus 로고
    • LIBSVM: a library for support vector machines
    • 27:21-27:27
    • Chang C.-C., Lin C.-J. LIBSVM: a library for support vector machines. ACM Trans. Intell. Syst. Technol 2011, 2(3). 27:21-27:27.
    • (2011) ACM Trans. Intell. Syst. Technol , vol.2 , Issue.3
    • Chang, C.-C.1    Lin, C.-J.2
  • 10
    • 77955985430 scopus 로고    scopus 로고
    • The influence of intracellular storage material on bacterial identification by means of Raman spectroscopy
    • Ciobotǎ V., Burkhardt E.-M., Schumacher W., Rösch P., Küsel K., Popp J. The influence of intracellular storage material on bacterial identification by means of Raman spectroscopy. Analyt. Bioanalyt. Chem. 2010, 397(7):2929-2937.
    • (2010) Analyt. Bioanalyt. Chem. , vol.397 , Issue.7 , pp. 2929-2937
    • Ciobotǎ, V.1    Burkhardt, E.-M.2    Schumacher, W.3    Rösch, P.4    Küsel, K.5    Popp, J.6
  • 11
    • 0036568032 scopus 로고    scopus 로고
    • On the learnability and design of output codes for multiclass problems
    • Crammer K., Singer Y. On the learnability and design of output codes for multiclass problems. Machine Learn. 2002, 47:201-233.
    • (2002) Machine Learn. , vol.47 , pp. 201-233
    • Crammer, K.1    Singer, Y.2
  • 12
    • 53849086824 scopus 로고    scopus 로고
    • Sure independence screening for ultrahigh dimensional feature space
    • Fan J., Lv J. Sure independence screening for ultrahigh dimensional feature space. J. Royal Stat. Soc.: Series B (Stat. Method.) 2008, 70(5):849-911.
    • (2008) J. Royal Stat. Soc.: Series B (Stat. Method.) , vol.70 , Issue.5 , pp. 849-911
    • Fan, J.1    Lv, J.2
  • 13
    • 0036314980 scopus 로고    scopus 로고
    • Legionella and Legionnaires' disease: 25 years of investigation
    • Fields B.S., Benson R.F., Besser R.E. Legionella and Legionnaires' disease: 25 years of investigation. Clin. Microbiol. Rev. 2002, 15(3):506-526.
    • (2002) Clin. Microbiol. Rev. , vol.15 , Issue.3 , pp. 506-526
    • Fields, B.S.1    Benson, R.F.2    Besser, R.E.3
  • 14
    • 0010743717 scopus 로고
    • Polarized Raman spectra and intensities of aromatic amino acids phenylalanine, tyrosine and tryptophan
    • Fischer W.B., Eysel H.H. Polarized Raman spectra and intensities of aromatic amino acids phenylalanine, tyrosine and tryptophan. Spectrochimica Acta Part A: Mol. Spectroscopy 1992, 48(5):725-732.
    • (1992) Spectrochimica Acta Part A: Mol. Spectroscopy , vol.48 , Issue.5 , pp. 725-732
    • Fischer, W.B.1    Eysel, H.H.2
  • 15
    • 61349183929 scopus 로고    scopus 로고
    • Direct analysis of clinical relevant single bacterial cells from cerebrospinal fluid during bacterial meningitis by means of micro-Raman spectroscopy
    • Harz M., Kiehntopf M., Stöckel S., Rösch P., Straube E., Deufel T., Popp J. Direct analysis of clinical relevant single bacterial cells from cerebrospinal fluid during bacterial meningitis by means of micro-Raman spectroscopy. J. Biophoton. 2009, 2(1-2):70-80.
    • (2009) J. Biophoton. , vol.2 , Issue.1-2 , pp. 70-80
    • Harz, M.1    Kiehntopf, M.2    Stöckel, S.3    Rösch, P.4    Straube, E.5    Deufel, T.6    Popp, J.7
  • 16
    • 0026028597 scopus 로고
    • Classification and identification of bacteria by Fourier-transform infrared spectroscopy
    • Helm D., Labischinski H., Schallehn G., Naumann D. Classification and identification of bacteria by Fourier-transform infrared spectroscopy. J. Gen. Microbiol. 1991, 137(1):69-79.
    • (1991) J. Gen. Microbiol. , vol.137 , Issue.1 , pp. 69-79
    • Helm, D.1    Labischinski, H.2    Schallehn, G.3    Naumann, D.4
  • 17
    • 79952092653 scopus 로고    scopus 로고
    • Observation of content and heterogeneity of poly-[ß]-hydroxybutyric acid (PHB) in Legionella bozemanii by vibrational spectroscopy
    • Hermelink A., Stammler M., Naumann D. Observation of content and heterogeneity of poly-[ß]-hydroxybutyric acid (PHB) in Legionella bozemanii by vibrational spectroscopy. Analyst 2011, 136(6):1129-1133.
    • (2011) Analyst , vol.136 , Issue.6 , pp. 1129-1133
    • Hermelink, A.1    Stammler, M.2    Naumann, D.3
  • 19
    • 0023900881 scopus 로고
    • Simultaneous infections with different serogroups of Legionella pneumophila investigated by routine methods and Fourier transform infrared spectroscopy
    • Horbach I., Naumann D., Fehrenbach F.J. Simultaneous infections with different serogroups of Legionella pneumophila investigated by routine methods and Fourier transform infrared spectroscopy. J. Clin. Microbiol. 1988, 26(6):1106-1110.
    • (1988) J. Clin. Microbiol. , vol.26 , Issue.6 , pp. 1106-1110
    • Horbach, I.1    Naumann, D.2    Fehrenbach, F.J.3
  • 20
    • 0032974709 scopus 로고    scopus 로고
    • Poly-3-hydroxybutyrate in Legionella pneumophila, an energy source for survival in low-nutrient environments
    • James B.W., Mauchline W.S., Dennis P.J., Keevil C.W., Wait R. Poly-3-hydroxybutyrate in Legionella pneumophila, an energy source for survival in low-nutrient environments. Appl. Environ. Microbiol. 1999, 65(2):822-827.
    • (1999) Appl. Environ. Microbiol. , vol.65 , Issue.2 , pp. 822-827
    • James, B.W.1    Mauchline, W.S.2    Dennis, P.J.3    Keevil, C.W.4    Wait, R.5
  • 24
    • 34247164460 scopus 로고    scopus 로고
    • The investigation of single bacteria by means of fluorescence staining and Raman spectroscopy
    • Krause M., Radt B., Rösch P., Popp J. The investigation of single bacteria by means of fluorescence staining and Raman spectroscopy. J. Raman Spect. 2007, 38(4):369-372.
    • (2007) J. Raman Spect. , vol.38 , Issue.4 , pp. 369-372
    • Krause, M.1    Radt, B.2    Rösch, P.3    Popp, J.4
  • 25
    • 56549097898 scopus 로고    scopus 로고
    • Localizing and identifying living bacteria in an abiotic environment by a combination of Raman and fluorescence microscopy
    • Krause M., Rösch P., Radt B., Popp J.r Localizing and identifying living bacteria in an abiotic environment by a combination of Raman and fluorescence microscopy. Anal. Chem. 2008, 80(22):8568-8575.
    • (2008) Anal. Chem. , vol.80 , Issue.22 , pp. 8568-8575
    • Krause, M.1    Rösch, P.2    Radt, B.3    Popp, J.4
  • 26
    • 80755125871 scopus 로고    scopus 로고
    • Assessment of two isolation techniques for bacteria in milk towards their compatibility with Raman spectroscopy
    • Meisel S., Stöckel S., Elschner M., Rösch P., Popp J. Assessment of two isolation techniques for bacteria in milk towards their compatibility with Raman spectroscopy. Analyst 2011, 136(23):4997-5005.
    • (2011) Analyst , vol.136 , Issue.23 , pp. 4997-5005
    • Meisel, S.1    Stöckel, S.2    Elschner, M.3    Rösch, P.4    Popp, J.5
  • 29
    • 3142512687 scopus 로고    scopus 로고
    • Differentiate to thrive: lessons from the Legionella pneumophila life cycle
    • Molofsky A.B., Swanson M.S. Differentiate to thrive: lessons from the Legionella pneumophila life cycle. Mol. Microbiol. 2004, 53(1):29-40.
    • (2004) Mol. Microbiol. , vol.53 , Issue.1 , pp. 29-40
    • Molofsky, A.B.1    Swanson, M.S.2
  • 31
    • 0037108389 scopus 로고    scopus 로고
    • Infection due to Legionella species other than L. pneumophila
    • Muder R.R., Victor L.Y. Infection due to Legionella species other than L. pneumophila. Clin. Infect. Dis. 2002, 35(8):990-998.
    • (2002) Clin. Infect. Dis. , vol.35 , Issue.8 , pp. 990-998
    • Muder, R.R.1    Victor, L.Y.2
  • 32
    • 0033965839 scopus 로고    scopus 로고
    • Nosocomial Legionella micdadei infection in transplant patients: fortune favors the prepared mind
    • Muder R.R., Stout J.E., Yu V.L. Nosocomial Legionella micdadei infection in transplant patients: fortune favors the prepared mind. Am. J. Med. 2000, 108(4):346-348.
    • (2000) Am. J. Med. , vol.108 , Issue.4 , pp. 346-348
    • Muder, R.R.1    Stout, J.E.2    Yu, V.L.3
  • 33
    • 84863314336 scopus 로고    scopus 로고
    • High-dimensional Bayesian clustering with variable selection: the R Package bclust
    • Nia V.P., Davison A.C. High-dimensional Bayesian clustering with variable selection: the R Package bclust. J. Stat. Soft. 2012, 47(5):1-22.
    • (2012) J. Stat. Soft. , vol.47 , Issue.5 , pp. 1-22
    • Nia, V.P.1    Davison, A.C.2
  • 34
    • 84886639359 scopus 로고
    • Fourier transform-infrared spectroscopic methods for microbial ecology: analysis of bacteria, bacteri-polymer mixtures and biofilms
    • Nichols P.D., Michael Henson J., Guckert J.B., Nivens D.E., White D.C. Fourier transform-infrared spectroscopic methods for microbial ecology: analysis of bacteria, bacteri-polymer mixtures and biofilms. J. Microbiol. Meth. 1985, 4(2):79-94.
    • (1985) J. Microbiol. Meth. , vol.4 , Issue.2 , pp. 79-94
    • Nichols, P.D.1    Michael Henson, J.2    Guckert, J.B.3    Nivens, D.E.4    White, D.C.5
  • 37
    • 0010803916 scopus 로고    scopus 로고
    • The first clinical isolate of Legionella parisiensis, from a liver transplant patient with pneumonia
    • Presti F.L., Riffard S., Vandenesch F., Reyrolle M., Ronco E., Ichai P., Etienne J. The first clinical isolate of Legionella parisiensis, from a liver transplant patient with pneumonia. J. Clin. Microbiol. 1997, 35(7):1706-1709.
    • (1997) J. Clin. Microbiol. , vol.35 , Issue.7 , pp. 1706-1709
    • Presti, F.L.1    Riffard, S.2    Vandenesch, F.3    Reyrolle, M.4    Ronco, E.5    Ichai, P.6    Etienne, J.7
  • 38
    • 0031717330 scopus 로고    scopus 로고
    • Identification of Legionella species by random amplified polymorphic DNA profiles
    • Presti F.L., Riffard S., Vandenesch F., Etienne J. Identification of Legionella species by random amplified polymorphic DNA profiles. J. Clin. Microbiol. 1998, 36(11):3193-3197.
    • (1998) J. Clin. Microbiol. , vol.36 , Issue.11 , pp. 3193-3197
    • Presti, F.L.1    Riffard, S.2    Vandenesch, F.3    Etienne, J.4
  • 40
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team, R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team R: a Language and Environment for Statistical Computing 2011, R Foundation for Statistical Computing, Vienna, Austria.
    • (2011) R: a Language and Environment for Statistical Computing
  • 41
    • 0021195923 scopus 로고
    • Legionella pneumonia in the United States: the distribution of serogroups and species causing human illness
    • Reingold A.L., Thomason B.M., Brake B.J., Thacker L., Wilkinson H.W., Kuritsky J.N. Legionella pneumonia in the United States: the distribution of serogroups and species causing human illness. J. Infect. Dis. 1984, 149(5):819-824.
    • (1984) J. Infect. Dis. , vol.149 , Issue.5 , pp. 819-824
    • Reingold, A.L.1    Thomason, B.M.2    Brake, B.J.3    Thacker, L.4    Wilkinson, H.W.5    Kuritsky, J.N.6
  • 42
    • 0028212860 scopus 로고
    • Influence of temperature and plumbing material selection on biofilm formation and growth of Legionella pneumophila in a model potable water system containing complex microbial flora
    • Rogers J., Dowsett A.B., Dennis P.J., Lee J.V., Keevil C.W. Influence of temperature and plumbing material selection on biofilm formation and growth of Legionella pneumophila in a model potable water system containing complex microbial flora. Appl. Environ. Microbiol. 1994, 60(5):1585-1592.
    • (1994) Appl. Environ. Microbiol. , vol.60 , Issue.5 , pp. 1585-1592
    • Rogers, J.1    Dowsett, A.B.2    Dennis, P.J.3    Lee, J.V.4    Keevil, C.W.5
  • 43
    • 85189260812 scopus 로고    scopus 로고
    • Discrimination of single-porin Escherichia (E.) coli mutants by ATR and transmission mode FTIR spectroscopy
    • Saraiva R.G., Lopes J.A., Machado J., Gameiro P., Feio M.J. Discrimination of single-porin Escherichia (E.) coli mutants by ATR and transmission mode FTIR spectroscopy. J. Biophot. 2012.
    • (2012) J. Biophot.
    • Saraiva, R.G.1    Lopes, J.A.2    Machado, J.3    Gameiro, P.4    Feio, M.J.5
  • 44
    • 64249114977 scopus 로고    scopus 로고
    • Gaussian mixture discriminant analysis for the single-cell differentiation of bacteria using micro-Raman spectroscopy
    • Schmid U., Rösch P., Krause M., Harz M., Popp J., Baumann K. Gaussian mixture discriminant analysis for the single-cell differentiation of bacteria using micro-Raman spectroscopy. Chemom. Intell. Lab Syst. 2009, 96(2):159-171.
    • (2009) Chemom. Intell. Lab Syst. , vol.96 , Issue.2 , pp. 159-171
    • Schmid, U.1    Rösch, P.2    Krause, M.3    Harz, M.4    Popp, J.5    Baumann, K.6
  • 46
    • 84899677143 scopus 로고    scopus 로고
    • Identification of carbapenem-resistant Acinetobacter baumannii clones using infrared spectroscopy
    • Sousa C., Grosso F., Meirinhos-Soares L., Peixe L., Lopes J. Identification of carbapenem-resistant Acinetobacter baumannii clones using infrared spectroscopy. J. Biophoton. 2012.
    • (2012) J. Biophoton.
    • Sousa, C.1    Grosso, F.2    Meirinhos-Soares, L.3    Peixe, L.4    Lopes, J.5
  • 47
    • 84869442998 scopus 로고    scopus 로고
    • Identification of Bacillus anthracis via Raman spectroscopy and chemometric approaches
    • Stöckel S., Meisel S., Elschner M., Rösch P., Popp J. Identification of Bacillus anthracis via Raman spectroscopy and chemometric approaches. Anal. Chem. 2012, 84(22):9873-9880.
    • (2012) Anal. Chem. , vol.84 , Issue.22 , pp. 9873-9880
    • Stöckel, S.1    Meisel, S.2    Elschner, M.3    Rösch, P.4    Popp, J.5
  • 48
  • 49
    • 33947525422 scopus 로고    scopus 로고
    • Margin trees for high-dimensional classification
    • Tibshirani R., Hastie T. Margin trees for high-dimensional classification. J. Mach. Learn. Res. 2007, 8:637-652.
    • (2007) J. Mach. Learn. Res. , vol.8 , pp. 637-652
    • Tibshirani, R.1    Hastie, T.2
  • 51
    • 79958105960 scopus 로고    scopus 로고
    • Raman spectroscopic detection of physiology changes in plasmid-bearing Escherichia coli with and without antibiotic treatment
    • Walter A., Reinicke M., Bocklitz T., Schumacher W., Rösch P., Kothe E., Popp J. Raman spectroscopic detection of physiology changes in plasmid-bearing Escherichia coli with and without antibiotic treatment. Anal. Bioanaly. Chem. 2011, 400(9):2763-2773.
    • (2011) Anal. Bioanaly. Chem. , vol.400 , Issue.9 , pp. 2763-2773
    • Walter, A.1    Reinicke, M.2    Bocklitz, T.3    Schumacher, W.4    Rösch, P.5    Kothe, E.6    Popp, J.7
  • 53
    • 0025213611 scopus 로고
    • Problems associated with identification of Legionella species from the environment and isolation of six possible new species
    • Wilkinson I.J., Sangster N., Ratcliff R.M., Mugg P.A., Davos D.E., Lanser J.A. Problems associated with identification of Legionella species from the environment and isolation of six possible new species. Appl. Environ. Microbiol. 1990, 56(3):796-802.
    • (1990) Appl. Environ. Microbiol. , vol.56 , Issue.3 , pp. 796-802
    • Wilkinson, I.J.1    Sangster, N.2    Ratcliff, R.M.3    Mugg, P.A.4    Davos, D.E.5    Lanser, J.A.6
  • 54
    • 84986745995 scopus 로고
    • Fourier transform Raman spectroscopy of bacterial cell walls
    • Williams A.C., Edwards H.G.M. Fourier transform Raman spectroscopy of bacterial cell walls. J. Raman Spectro. 1994, 25(7-8):673-677.
    • (1994) J. Raman Spectro. , vol.25 , Issue.7-8 , pp. 673-677
    • Williams, A.C.1    Edwards, H.G.M.2


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