-
1
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW, et al. 2010. PHENIX: A comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66: 213-221.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
-
2
-
-
78650444037
-
The PIN-domain ribonucleases and the prokaryotic VapBC toxin-antitoxin array
-
Arcus VL, McKenzie JL, Robson J, Cook GM. 2011. The PIN-domain ribonucleases and the prokaryotic VapBC toxin-antitoxin array. Protein Eng Des Sel 24: 33-40.
-
(2011)
Protein Eng des Sel
, vol.24
, pp. 33-40
-
-
Arcus, V.L.1
McKenzie, J.L.2
Robson, J.3
Cook, G.M.4
-
3
-
-
0842347403
-
U17/snR30 is a ubiquitous snoRNA with two conserved sequence motifs essential for 18S rRNA production
-
Atzorn V, Fragapane P, Kiss T. 2004. U17/snR30 is a ubiquitous snoRNA with two conserved sequence motifs essential for 18S rRNA production. Mol Cell Biol 24: 1769-1778.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 1769-1778
-
-
Atzorn, V.1
Fragapane, P.2
Kiss, T.3
-
4
-
-
33745462567
-
The PINc domain protein Utp24, a putative nuclease, is required for the early cleavage steps in 18S rRNA maturation
-
Bleichert F, Granneman S, Osheim YN, Beyer AL, Baserga SJ. 2006. The PINc domain protein Utp24, a putative nuclease, is required for the early cleavage steps in 18S rRNA maturation. Proc Natl Acad Sci 103: 9464-9469.
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 9464-9469
-
-
Bleichert, F.1
Granneman, S.2
Osheim, Y.N.3
Beyer, A.L.4
Baserga, S.J.5
-
5
-
-
0034649546
-
PIN domains in nonsense-mediated mRNA decay and RNAi
-
Clissold PM, Ponting CP. 2000. PIN domains in nonsense-mediated mRNA decay and RNAi. Curr Biol 10: R888-R890.
-
(2000)
Curr Biol
, vol.10
-
-
Clissold, P.M.1
Ponting, C.P.2
-
7
-
-
0037182878
-
A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis
-
Dragon F, Gallagher JE, Compagnone-Post PA, Mitchell BM, Porwancher KA, Wehner KA, Wormsley S, Settlage RE, Shabanowitz J, Osheim Y, et al. 2002. A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417: 967-970.
-
(2002)
Nature
, vol.417
, pp. 967-970
-
-
Dragon, F.1
Gallagher, J.E.2
Compagnone-Post, P.A.3
Mitchell, B.M.4
Porwancher, K.A.5
Wehner, K.A.6
Wormsley, S.7
Settlage, R.E.8
Shabanowitz, J.9
Osheim, Y.10
-
10
-
-
7044231044
-
PIN domain of Nob1p is required for D-site cleavage in 20S pre-rRNA
-
Fatica A, Tollervey D, Dlakić M. 2004. PIN domain of Nob1p is required for D-site cleavage in 20S pre-rRNA. RNA 10: 1698-1701.
-
(2004)
RNA
, vol.10
, pp. 1698-1701
-
-
Fatica, A.1
Tollervey, D.2
Dlakić, M.3
-
11
-
-
65649128530
-
18S rRNA processing requires base pairings of snR30 H/ACA snoRNA to eukaryote-specific 18S sequences
-
Fayet-Lebaron E, Atzorn V, Henry Y, Kiss T. 2009. 18S rRNA processing requires base pairings of snR30 H/ACA snoRNA to eukaryote-specific 18S sequences. EMBO J 28: 1260-1270.
-
(2009)
EMBO J
, vol.28
, pp. 1260-1270
-
-
Fayet-Lebaron, E.1
Atzorn, V.2
Henry, Y.3
Kiss, T.4
-
12
-
-
33750490399
-
Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex
-
Glavan F, Behm-Ansmant I, Izaurralde E, Conti E. 2006. Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex. EMBO J 25: 5117-5125.
-
(2006)
EMBO J
, vol.25
, pp. 5117-5125
-
-
Glavan, F.1
Behm-Ansmant, I.2
Izaurralde, E.3
Conti, E.4
-
13
-
-
18544371820
-
90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors
-
Grandi P, Rybin V, Bassler J, Petfalski E, Strauss D, Marzioch M, Schafer T, Kuster B, Tschochner H, Tollervey D, et al. 2002. 90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors. Mol Cell 10: 105-115.
-
(2002)
Mol Cell
, vol.10
, pp. 105-115
-
-
Grandi, P.1
Rybin, V.2
Bassler, J.3
Petfalski, E.4
Strauss, D.5
Marzioch, M.6
Schafer, T.7
Kuster, B.8
Tschochner, H.9
Tollervey, D.10
-
14
-
-
49249139050
-
The post-transcriptional steps of eukaryotic ribosome biogenesis
-
Henras AK, Soudet J, Gérus M, Lebaron S, Caizergues-Ferrer M, Mougin A, Henry Y. 2008. The post-transcriptional steps of eukaryotic ribosome biogenesis. Cell Mol Life Sci 65: 2334-2359.
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 2334-2359
-
-
Henras, A.K.1
Soudet, J.2
Gérus, M.3
Lebaron, S.4
Caizergues-Ferrer, M.5
Mougin, A.6
Henry, Y.7
-
15
-
-
84860369366
-
Utp23p is required for dissociation of snR30 small nucleolar RNP from preribosomal particles
-
Hoareau-Aveilla C, Fayet-Lebaron E, Jády BE, Henras AK, Kiss T. 2011. Utp23p is required for dissociation of snR30 small nucleolar RNP from preribosomal particles. Nucleic Acids Res 40: 3641-3652.
-
(2011)
Nucleic Acids Res
, vol.40
, pp. 3641-3652
-
-
Hoareau-Aveilla, C.1
Fayet-Lebaron, E.2
Jády, B.E.3
Henras, A.K.4
Kiss, T.5
-
16
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm L, Sander C. 1993. Protein structure comparison by alignment of distance matrices. J Mol Biol 233: 123-138.
-
(1993)
J Mol Biol
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
17
-
-
80053576895
-
Inside the 40S ribosome assembly machinery
-
Karbstein K. 2011. Inside the 40S ribosome assembly machinery. Curr Opin Chem Biol 15: 657-663.
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 657-663
-
-
Karbstein, K.1
-
20
-
-
3042846821
-
Crystal structure of a PIN (PilT N-terminus) domain (AF0591) from Archaeoglobus fulgidus at 1.90 Å resolution
-
Levin I, Schwarzenbacher R, Page R, Abdubek P, Ambing E, Biorac T, Brinen LS, Campbell J, Canaves JM, Chiu HJ, et al. 2004. Crystal structure of a PIN (PilT N-terminus) domain (AF0591) from Archaeoglobus fulgidus at 1.90 Å resolution. Proteins 56: 404-408.
-
(2004)
Proteins
, vol.56
, pp. 404-408
-
-
Levin, I.1
Schwarzenbacher, R.2
Page, R.3
Abdubek, P.4
Ambing, E.5
Biorac, T.6
Brinen, L.S.7
Campbell, J.8
Canaves, J.M.9
Chiu, H.J.10
-
21
-
-
84886607786
-
An RNA-binding complex involved in ribosome biogenesis contains a protein with homology to tRNA CCA-adding enzyme
-
doi: 1001610.1001371/journal.pbio.1001669
-
Lin J, Lu J, Feng Y, Sun M, Ye K. 2013. An RNA-binding complex involved in ribosome biogenesis contains a protein with homology to tRNA CCA-adding enzyme. PLoS Biol 11: e1001669. doi: 1001610.1001371/journal.pbio.1001669.
-
(2013)
PLoS Biol
, vol.11
-
-
Lin, J.1
Lu, J.2
Feng, Y.3
Sun, M.4
Ye, K.5
-
22
-
-
0027447757
-
Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis
-
Morrissey JP, Tollervey D. 1993. Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis. Mol Cell Biol 13: 2469-2477.
-
(1993)
Mol Cell Biol
, vol.13
, pp. 2469-2477
-
-
Morrissey, J.P.1
Tollervey, D.2
-
23
-
-
0032897075
-
Efficient anisotropic refinement of macromolecular structures using FFT
-
Murshudov GN, Vagin AA, Lebedev A, Wilson KS, Dodson EJ. 1999. Efficient anisotropic refinement of macromolecular structures using FFT. Acta Crystallogr D Biol Crystallogr 55: 247-255.
-
(1999)
Acta Crystallogr D Biol Crystallogr
, vol.55
, pp. 247-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Lebedev, A.3
Wilson, K.S.4
Dodson, E.J.5
-
24
-
-
10944222974
-
Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae
-
Osheim YN, French SL, Keck KM, Champion EA, Spasov K, Dragon F, Baserga SJ, Beyer AL. 2004. Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae. Mol Cell 16: 943 -954.
-
(2004)
Mol Cell
, vol.16
, pp. 943-954
-
-
Osheim, Y.N.1
French, S.L.2
Keck, K.M.3
Champion, E.A.4
Spasov, K.5
Dragon, F.6
Baserga, S.J.7
Beyer, A.L.8
-
25
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z, MinorW. 1997. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 276: 307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
26
-
-
77952583684
-
Maturation of eukaryotic ribosomes: Acquisition of functionality
-
Panse VG, Johnson AW. 2010. Maturation of eukaryotic ribosomes: Acquisition of functionality. Trends Biochem Sci 35: 260-266.
-
(2010)
Trends Biochem Sci
, vol.35
, pp. 260-266
-
-
Panse, V.G.1
Johnson, A.W.2
-
27
-
-
70449656291
-
RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1
-
Pertschy B, Schneider C, Gnädig M, Schäfer T, Tollervey D, Hurt E. 2009. RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1. J Biol Chem 284: 35079-35091.
-
(2009)
J Biol Chem
, vol.284
, pp. 35079-35091
-
-
Pertschy, B.1
Schneider, C.2
Gnädig, M.3
Schäfer, T.4
Tollervey, D.5
Hurt, E.6
-
29
-
-
0036068193
-
Crystal structure of the FHA domain of the Chfr mitotic checkpoint protein and its complex with tungstate
-
Stavridi ES, Huyen Y, Loreto IR, Scolnick DM, Halazonetis TD, Pavletich NP, Jeffrey PD. 2002. Crystal structure of the FHA domain of the Chfr mitotic checkpoint protein and its complex with tungstate. Structure 10: 891-899.
-
(2002)
Structure
, vol.10
, pp. 891-899
-
-
Stavridi, E.S.1
Huyen, Y.2
Loreto, I.R.3
Scolnick, D.M.4
Halazonetis, T.D.5
Pavletich, N.P.6
Jeffrey, P.D.7
-
30
-
-
0038738334
-
Pre-ribosomes on the road from the nucleolus to the cytoplasm
-
Tschochner H, Hurt E. 2003. Pre-ribosomes on the road from the nucleolus to the cytoplasm. Trends Cell Biol 13: 255-263.
-
(2003)
Trends Cell Biol
, vol.13
, pp. 255-263
-
-
Tschochner, H.1
Hurt, E.2
-
32
-
-
84865837598
-
The box C/D and H/ACA snoRNPs: Key players in the modification, processing and the dynamic folding of ribosomal RNA
-
Watkins NJ, Bohnsack MT. 2011. The box C/D and H/ACA snoRNPs: Key players in the modification, processing and the dynamic folding of ribosomal RNA. Wiley Interdiscip Rev RNA 3: 397-414.
-
(2011)
Wiley Interdiscip Rev RNA
, vol.3
, pp. 397-414
-
-
Watkins, N.J.1
Bohnsack, M.T.2
|