-
1
-
-
1542569606
-
Membrane recognition and targeting by lipid-binding domains
-
DiNitto, J. P., T. C. Cronin, and D. G. Lambright. 2003. Membrane recognition and targeting by lipid-binding domains. Sci. STKE. 2003: re16.
-
(2003)
Sci. STKE
, vol.2003
-
-
DiNitto, J.P.1
Cronin, T.C.2
Lambright, D.G.3
-
2
-
-
20544475665
-
Membrane-protein interactions in cell signaling and membrane trafficking
-
DOI 10.1146/annurev.biophys.33.110502.133337
-
Cho, W., and R. V. Stahelin. 2005. Membrane-protein interactions in cell signaling and membrane trafficking. Annu. Rev. Biophys. Biomol. Struct. 34:119-151. (Pubitemid 40847721)
-
(2005)
Annual Review of Biophysics and Biomolecular Structure
, vol.34
, pp. 119-151
-
-
Cho, W.1
Stahelin, R.V.2
-
3
-
-
38549092474
-
Membrane recognition by phospholipidbinding domains
-
Lemmon, M. A. 2008. Membrane recognition by phospholipidbinding domains. Nat. Rev. Mol. Cell Biol. 9:99-111.
-
(2008)
Nat. Rev. Mol. Cell Biol.
, vol.9
, pp. 99-111
-
-
Lemmon, M.A.1
-
4
-
-
33748313081
-
The prevalence and significance of PDZ domain-phosphoinositide interactions
-
DOI 10.1016/j.bbalip.2006.04.003, PII S138819810600117X
-
Zimmermann, P. 2006. The prevalence and significance of PDZ domain-phosphoinositide interactions. Biochim. Biophys. Acta. 1761:947-956. (Pubitemid 44332327)
-
(2006)
Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids
, vol.1761
, Issue.8
, pp. 947-956
-
-
Zimmermann, P.1
-
5
-
-
58549092371
-
Organization and dynamics of PDZ-domain-related supramodules in the postsynaptic density
-
Feng, W., and M. Zhang. 2009. Organization and dynamics of PDZ-domain-related supramodules in the postsynaptic density. Nat. Rev. Neurosci. 10:87-99.
-
(2009)
Nat. Rev. Neurosci
, vol.10
, pp. 87-99
-
-
Feng, W.1
Zhang, M.2
-
6
-
-
84862827172
-
Genome-wide functional annotation of dual-specificity protein- and lipid-binding modules that regulate protein interactions
-
Chen, Y., R. Sheng, M. Kallberg, A. Silkov, M. P. Tun, N. Bhardwaj, S. Kurilova, R. A. Hall, B. Honig, H. Lu, et al. 2012. Genome-wide functional annotation of dual-specificity protein- and lipid-binding modules that regulate protein interactions. Mol. Cell. 46:226-237.
-
(2012)
Mol. Cell.
, vol.46
, pp. 226-237
-
-
Chen, Y.1
Sheng, R.2
Kallberg, M.3
Silkov, A.4
Tun, M.P.5
Bhardwaj, N.6
Kurilova, S.7
Hall, R.A.8
Honig, B.9
Lu, H.10
-
7
-
-
84871861963
-
Cholesterol modulates cell signaling and protein networking by specifically interacting with PDZ domain-containing scaffold proteins
-
Sheng, R., Y. Chen, H. Yung Gee, E. Stec, H. R. Melowic, N. R. Blatner, M. P. Tun, Y. Kim, M. Kallberg, T. K. Fujiwara, et al. 2012. Cholesterol modulates cell signaling and protein networking by specifically interacting with PDZ domain-containing scaffold proteins. Nat. Commun. 3:1249.
-
(2012)
Nat. Commun.
, vol.3
, pp. 1249
-
-
Sheng, R.1
Chen, Y.2
Gee, H.Y.3
Stec, E.4
Melowic, H.R.5
Blatner, N.R.6
Tun, M.P.7
Kim, Y.8
Kallberg, M.9
Fujiwara, T.K.10
-
8
-
-
33646192301
-
Structural bioinformatics prediction of membrane-binding proteins
-
Bhardwaj, N., R. V. Stahelin, R. E. Langlois, W. Cho, and H. Lu. 2006. Structural bioinformatics prediction of membrane-binding proteins. J. Mol. Biol. 359:486-495.
-
(2006)
J. Mol. Biol.
, vol.359
, pp. 486-495
-
-
Bhardwaj, N.1
Stahelin, R.V.2
Langlois, R.E.3
Cho, W.4
Lu, H.5
-
9
-
-
80053201448
-
Genome-wide structural analysis reveals novel membrane binding properties of AP180 N-terminal homology (ANTH) domains
-
Silkov, A., Y. Yoon, H. Lee, N. Gokhale, E. Adu-Gyamfi, R. V. Stahelin, W. Cho, and D. Murray. 2011. Genome-wide structural analysis reveals novel membrane binding properties of AP180 N-terminal homology (ANTH) domains. J. Biol. Chem. 286:34155-34163.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 34155-34163
-
-
Silkov, A.1
Yoon, Y.2
Lee, H.3
Gokhale, N.4
Adu-Gyamfi, E.5
Stahelin, R.V.6
Cho, W.7
Murray, D.8
-
10
-
-
0035884406
-
Membrane binding assays for peripheral proteins
-
DOI 10.1006/abio.2001.5225
-
Cho, W., L. Bittova, and R. V. Stahelin. 2001. Membrane binding assays for peripheral proteins. Anal. Biochem. 296:153-161. (Pubitemid 32868495)
-
(2001)
Analytical Biochemistry
, vol.296
, Issue.2
, pp. 153-161
-
-
Cho, W.1
Bittova, L.2
Stahelin, R.V.3
-
11
-
-
33746288421
-
Determining selectivity of phosphoinositide-binding domains
-
DOI 10.1016/j.ymeth.2006.05.006, PII S1046202306000764
-
Narayan, K., and M. A. Lemmon. 2006. Determining selectivity of phosphoinositide-binding domains. Methods. 39:122-133. (Pubitemid 44107710)
-
(2006)
Methods
, vol.39
, Issue.2
, pp. 122-133
-
-
Narayan, K.1
Lemmon, M.A.2
-
13
-
-
0027050183
-
1 binds with high affinity to phospholipid vesicles containing phosphatidylinositol 4,5-bisphosphate
-
DOI 10.1021/bi00166a005
-
Rebecchi, M., A. Peterson, and S. McLaughlin. 1992. Phosphoinositidespecific phospholipase C-delta 1 binds with high affinity to phospholipid vesicles containing phosphatidylinositol 4, 5-bisphosphate. Biochemistry. 31:12742-12747. (Pubitemid 23027052)
-
(1992)
Biochemistry
, vol.31
, Issue.51
, pp. 12742-12747
-
-
Rebecchi, M.1
Peterson, A.2
McLaughlin, S.3
-
14
-
-
0031570794
-
2 kinetic and binding assay using phospholipid-coated hydrophobic beads
-
DOI 10.1006/abio.1997.2200
-
Kim, Y., L. Lichtenbergova, Y. Snitko, and W. Cho. 1997. A phospholipase A2 kinetic and binding assay using phospholipid-coated hydrophobic beads. Anal. Biochem. 250:109-116. (Pubitemid 27310319)
-
(1997)
Analytical Biochemistry
, vol.250
, Issue.1
, pp. 109-116
-
-
Kim, Y.1
Lichtenbergova, L.2
Snitko, Y.3
Cho, W.4
-
15
-
-
77950351987
-
Quantitative analysis of protein-lipid interactions using tryptophan fluorescence
-
Kraft, C. A., J. L. Garrido, L. Leiva-Vega, and G. Romero. 2009. Quantitative analysis of protein-lipid interactions using tryptophan fluorescence. Sci. Signal. 2: p 14.
-
(2009)
Sci. Signal.
, vol.2
, pp. 14
-
-
Kraft, C.A.1
Garrido, J.L.2
Leiva-Vega, L.3
Romero, G.4
-
16
-
-
0028840151
-
A structure-function study of bovine pancreatic phospholipase A2 using polymerized mixed liposomes
-
Dua, R., S. K. Wu, and W. Cho. 1995. A structure-function study of bovine pancreatic phospholipase A2 using polymerized mixed liposomes. J. Biol. Chem. 270:263-268.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 263-268
-
-
Dua, R.1
Wu, S.K.2
Cho, W.3
-
17
-
-
0023109718
-
Association of protein kinase C with phospholipid vesicles
-
DOI 10.1021/bi00375a017
-
Bazzi, M. D., and G. L. Nelsestuen. 1987. Association of protein kinase C with phospholipid vesicles. Biochemistry. 26:115-122. (Pubitemid 17014419)
-
(1987)
Biochemistry
, vol.26
, Issue.1
, pp. 115-122
-
-
Bazzi, M.D.1
Nelsestuen, G.L.2
-
18
-
-
0030612437
-
Ca2+-signaling cycle of a membrane-docking C2 domain
-
Nalefski, E. A., M. M. Slazas, and J. J. Falke. 1997. Ca2+-signaling cycle of a membrane-docking C2 domain. Biochemistry. 36:12011-12018.
-
(1997)
Biochemistry
, vol.36
, pp. 12011-12018
-
-
Nalefski, E.A.1
Slazas, M.M.2
Falke, J.J.3
-
19
-
-
0033534175
-
2
-
Sumandea, M., S. Das, C. Sumandea, and W. Cho. 1999. Roles of aromatic residues in high interfacial activity of Naja naja atra phospholipase A2. Biochemistry. 38:16290-16297. (Pubitemid 129520551)
-
(1999)
Biochemistry
, vol.38
, Issue.49
, pp. 16290-16297
-
-
Sumandea, M.1
Das, S.2
Sumandea, C.3
Cho, W.4
-
20
-
-
80155147186
-
In situ quantitative imaging of cellular lipids using molecular sensors
-
Yoon, Y., P. J. Lee, S. Kurilova, and W. Cho. 2011. In situ quantitative imaging of cellular lipids using molecular sensors. Nat. Chem. 3:868-874.
-
(2011)
Nat. Chem.
, vol.3
, pp. 868-874
-
-
Yoon, Y.1
Lee, P.J.2
Kurilova, S.3
Cho, W.4
-
21
-
-
78650546282
-
Small molecule inhibition of phosphatidylinositol-3, 4, 5-triphosphate (PIP3) binding to pleckstrin homology domains
-
Miao, B., I. Skidan, J. Yang, A. Lugovskoy, M. Reibarkh, K. Long, T. Brazell, K. A. Durugkar, J. Maki, C. V. Ramana, et al. 2010. Small molecule inhibition of phosphatidylinositol-3, 4, 5-triphosphate (PIP3) binding to pleckstrin homology domains. Proc. Natl. Acad. Sci. USA. 107:20126-20131.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 20126-20131
-
-
Miao, B.1
Skidan, I.2
Yang, J.3
Lugovskoy, A.4
Reibarkh, M.5
Long, K.6
Brazell, T.7
Durugkar, K.A.8
Maki, J.9
Ramana, C.V.10
-
22
-
-
4143120995
-
Fluorescence correlation spectroscopy studies of peptide and protein binding phospholipid vesicles
-
DOI 10.1529/biophysj.104.039958
-
Rusu, L., A. Gambhir, S. McLaughlin, and J. Radler. 2004. Fluorescence correlation spectroscopy studies of Peptide and protein binding to phospholipid vesicles. Biophys. J. 87:1044-1053. (Pubitemid 39095083)
-
(2004)
Biophysical Journal
, vol.87
, Issue.2
, pp. 1044-1053
-
-
Rusu, L.1
Gambhir, A.2
McLaughlin, S.3
Radler, J.4
-
23
-
-
62549083819
-
Microplate-based characterization of protein-phosphoinositide binding interactions using a synthetic biotinylated headgroup analogue
-
Gong, D., M. D. Smith, D. Manna, H. E. Bostic, W. Cho, and M. D. Best. 2009. Microplate-based characterization of protein-phosphoinositide binding interactions using a synthetic biotinylated headgroup analogue. Bioconjug. Chem. 20:310-316.
-
(2009)
Bioconjug. Chem.
, vol.20
, pp. 310-316
-
-
Gong, D.1
Smith, M.D.2
Manna, D.3
Bostic, H.E.4
Cho, W.5
Best, M.D.6
-
24
-
-
0028255937
-
2 by heparin
-
Dua, R., and W. Cho. 1994 Inhibition of human secretory class II phospholipase A2 by heparin. Eur. J. Biochem. 221:481-490. (Pubitemid 24120594)
-
(1994)
European Journal of Biochemistry
, vol.221
, Issue.1
, pp. 481-490
-
-
Dua, R.1
Cho, W.2
-
25
-
-
0344443708
-
Activation Mechanisms of Conventional Protein Kinase C Isoforms Are Determined by the Ligand Affinity and Conformational Flexibility of Their C1 Domains
-
DOI 10.1074/jbc.M307853200
-
Ananthanarayanan, B., R. V. Stahelin, M. A. Digman, and W. Cho. 2003. Activation mechanisms of conventional protein kinase C isoforms are determined by the ligand affinity and conformational flexibility of their C1 domains. J. Biol. Chem. 278:46886-46894. (Pubitemid 37452270)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.47
, pp. 46886-46894
-
-
Ananthanarayanan, B.1
Stahelin, R.V.2
Digman, M.A.3
Cho, W.4
-
26
-
-
36148957855
-
Mechanistic basis of differential cellular responses of phosphatidylinositol 3,4-bisphosphate- and phosphatidylinositol 3,4,5-trisphosphate-binding pleckstrin homology domains
-
DOI 10.1074/jbc.M703517200
-
Manna, D., A. Albanese, W. S. Park, and W. Cho. 2007. Mechanistic basis of differential cellular responses of phosphatidylinositol 3, 4-bisphosphate- and phosphatidylinositol 3, 4, 5-trisphosphate-binding pleckstrin homology domains. J. Biol. Chem. 282:32093-32105. (Pubitemid 350106465)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.44
, pp. 32093-32105
-
-
Manna, D.1
Albanese, A.2
Wei, S.P.3
Cho, W.4
-
27
-
-
0035901553
-
2
-
DOI 10.1021/bi0020325
-
Stahelin, R. V., and W. Cho. 2001. Differential roles of ionic, aliphatic, and aromatic residues in membrane-protein interactions: a surface plasmon resonance study on phospholipases A2. Biochemistry. 40:4672-4678. (Pubitemid 32374655)
-
(2001)
Biochemistry
, vol.40
, Issue.15
, pp. 4672-4678
-
-
Stahelin, R.V.1
Cho, W.2
-
28
-
-
0035503913
-
Roles of calcium ions in the membrane binding of C2 domains
-
DOI 10.1042/0264-6021:3590679
-
Stahelin, R. V., and W. Cho. 2001. Roles of calcium ions in the membrane binding of C2 domains. Biochem. J. 359:679-685. (Pubitemid 33063393)
-
(2001)
Biochemical Journal
, vol.359
, Issue.3
, pp. 679-685
-
-
Stahelin, R.V.1
Cho, W.2
-
29
-
-
30944467113
-
A guide to choosing fluorescent proteins
-
DOI 10.1038/nmeth819, PII N819
-
Shaner, N. C., P. A. Steinbach, and R. Y. Tsien. 2005. A guide to choosing fluorescent proteins. Nat. Methods. 2:905-909. (Pubitemid 43108726)
-
(2005)
Nature Methods
, vol.2
, Issue.12
, pp. 905-909
-
-
Shaner, N.C.1
Steinbach, P.A.2
Tsien, R.Y.3
-
30
-
-
80053160633
-
Proteins on the move: Insights gained from fluorescent protein technologies
-
Miyawaki, A. 2011. Proteins on the move: insights gained from fluorescent protein technologies. Nat. Rev. Mol. Cell Biol. 12:656-668.
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 656-668
-
-
Miyawaki, A.1
-
31
-
-
82355164165
-
Phosphatidylserine binding is essential for plasma membrane recruitment and signaling function of 3-phosphoinositide-dependent kinase-1
-
Lucas, N., and W. Cho. 2011. Phosphatidylserine binding is essential for plasma membrane recruitment and signaling function of 3-phosphoinositide- dependent kinase-1. J. Biol. Chem. 286:41265-41272.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 41265-41272
-
-
Lucas, N.1
Cho, W.2
-
32
-
-
0029670262
-
Molecular beacons: Probes that fluoresce upon hybridization
-
Tyagi, S., and F. R. Kramer. 1996. Molecular beacons: probes that fluoresce upon hybridization. Nat. Biotechnol. 14:303-308.
-
(1996)
Nat. Biotechnol.
, vol.14
, pp. 303-308
-
-
Tyagi, S.1
Kramer, F.R.2
-
33
-
-
0027432307
-
Binding of acylated peptides and fatty acids to phospholipid vesicles: Pertinence to myristoylated proteins
-
DOI 10.1021/bi00090a020
-
Peitzsch, R. M., and S. McLaughlin. 1993. Binding of acylated peptides and fatty acids to phospholipid vesicles: pertinence to myristoylated proteins. Biochemistry. 32:10436-10443. (Pubitemid 23320168)
-
(1993)
Biochemistry
, vol.32
, Issue.39
, pp. 10436-10443
-
-
Peitzsch, R.M.1
McLaughlin, S.2
-
34
-
-
0042707772
-
Contrasting membrane interaction mechanisms of AP180 N-terminal homology (ANTH) and epsin N-terminal homology (ENTH) domains
-
DOI 10.1074/jbc.M302865200
-
Stahelin, R. V., F. Long, B. J. Peter, D. Murray, P. De Camilli, H. T. McMahon, and W. Cho. 2003. Contrasting membrane interaction mechanisms of AP180 N-terminal homology (ANTH) and epsin N-terminal homology (ENTH) domains. J. Biol. Chem. 278:28993-28999. (Pubitemid 36935811)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.31
, pp. 28993-28999
-
-
Stahelin, R.V.1
Long, F.2
Peter, B.J.3
Murray, D.4
De Camilli, P.5
McMahon, H.T.6
Cho, W.7
-
35
-
-
34748849547
-
A unique sorting nexin regulates trafficking of potassium channels via a PDZ domain interaction
-
DOI 10.1038/nn1953, PII NN1953
-
Lunn, M. L., R. Nassirpour, C. Arrabit, J. Tan, I. McLeod, C. M. Arias, P. E. Sawchenko, J. R. Yates 3rd, and P. A. Slesinger. 2007. A unique sorting nexin regulates trafficking of potassium channels via a PDZ domain interaction. Nat. Neurosci. 10:1249-1259. (Pubitemid 47480290)
-
(2007)
Nature Neuroscience
, vol.10
, Issue.10
, pp. 1249-1259
-
-
Lunn, M.-L.1
Nassirpour, R.2
Arrabit, C.3
Tan, J.4
Mcleod, I.5
Arias, C.M.6
Sawchenko, P.E.7
Yates III, J.R.8
Slesinger, P.A.9
-
36
-
-
54449098958
-
Differential roles of phosphatidylserine, PtdIns (4, 5) P2, and PtdIns (3, 4, 5) P3 in plasma membrane targeting of C2 domains. Molecular dynamics simulation, membrane binding, and cell translocation studies of the PKCalpha C2 domain
-
Manna, D., N. Bhardwaj, M. S. Vora, R. V. Stahelin, H. Lu, and W. Cho. 2008. Differential roles of phosphatidylserine, PtdIns (4, 5) P2, and PtdIns (3, 4, 5) P3 in plasma membrane targeting of C2 domains. Molecular dynamics simulation, membrane binding, and cell translocation studies of the PKCalpha C2 domain. J. Biol. Chem. 283:: 26047-26058.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 26047-26058
-
-
Manna, D.1
Bhardwaj, N.2
Vora, M.S.3
Stahelin, R.V.4
Lu, H.5
Cho, W.6
-
37
-
-
8144228588
-
Structural insights into the regulation of PDK1 by phosphoinositides and inositol phosphates
-
DOI 10.1038/sj.emboj.7600379
-
Komander, D., A. Fairservice, M. Deak, G. S. Kular, A. R. Prescott, C. Peter Downes, S. T. Safrany, D. R. Alessi, and D. M. van Aalten. 2004. Structural insights into the regulation of PDK1 by phosphoinositides and inositol phosphates. EMBO J. 23:3918-3928. (Pubitemid 39472414)
-
(2004)
EMBO Journal
, vol.23
, Issue.20
, pp. 3918-3928
-
-
Komander, D.1
Fairservice, A.2
Deak, M.3
Kular, G.S.4
Prescott, A.R.5
Downes, C.P.6
Safrany, S.T.7
Alessi, D.R.8
Van Aalten, D.M.F.9
|