-
1
-
-
0036714783
-
Microbial cellulose utilization: Fundamentals and biotechnology
-
Lynd, L. R., Weimer, P. J., van Zyl, W. H., and Pretorius, I. S. (2002) Microbial cellulose utilization: fundamentals and biotechnology. Microbiol. Mol. Biol. Rev. 66, 506-577
-
(2002)
Microbiol. Mol. Biol. Rev
, vol.66
, pp. 506-577
-
-
Lynd, L.R.1
Weimer, P.J.2
Van Zyl, W.H.3
Pretorius, I.S.4
-
2
-
-
0001017188
-
Properties of a conidial-bound cellulase enzyme system from Trichoderma reesei
-
Kubicek, C. P., Mühlbauer, G., Grotz, M., John, E., and Kubicek-Pranz, E. M. (1988) Properties of a conidial-bound cellulase enzyme system from Trichoderma reesei. J. Gen. Microbiol. 134, 1215-1222
-
(1988)
J. Gen. Microbiol
, vol.134
, pp. 1215-1222
-
-
Kubicek, C.P.1
Mühlbauer, G.2
Grotz, M.3
John, E.4
Kubicek-Pranz, E.M.5
-
3
-
-
0027214236
-
Triggering of cellulase biosynthesis by cellulose in Trichoderma reesei: Involvement of a constitutive, sophorose-inducible, glucose-inhibited β-diglucoside permease
-
Kubicek, C. P., Messner, R., Gruber, F., Mandels, M., and Kubicek-Pranz, E. M. (1993) Triggering of cellulase biosynthesis by cellulose in Trichoderma reesei: involvement of a constitutive, sophorose-inducible, glucose-inhibited β-diglucoside permease. J. Biol. Chem. 268, 19364-19368
-
(1993)
J. Biol. Chem
, vol.268
, pp. 19364-19368
-
-
Kubicek, C.P.1
Messner, R.2
Gruber, F.3
Mandels, M.4
Kubicek-Pranz, E.M.5
-
4
-
-
0027551663
-
The Trichoderma cellulase regulatory puzzle: From the interior life of a secretory fungus
-
Kubicek, C. P., Messner, R., Gruber, F., Mach, R. L., and Kubicek-Pranz, E. M. (1993) The Trichoderma cellulase regulatory puzzle: from the interior life of a secretory fungus. Enzyme Microb. Technol. 15, 90-99
-
(1993)
Enzyme Microb. Technol
, vol.15
, pp. 90-99
-
-
Kubicek, C.P.1
Messner, R.2
Gruber, F.3
Mach, R.L.4
Kubicek-Pranz, E.M.5
-
5
-
-
0029045457
-
The bgl1 gene of Trichoderma reesei QM 9414 encodes an extracellular, cellulose-inducible β-glucosidase involved in cellulase induction by sophorose
-
Mach, R. L., Seiboth, B., Myasnikov, A., Gonzalez, R., Strauss, J., Harkki, A. M., and Kubicek, C. P. (1995) The bgl1 gene of Trichoderma reesei QM 9414 encodes an extracellular, cellulose-inducible β-glucosidase involved in cellulase induction by sophorose. Mol. Microbiol. 16, 687-697
-
(1995)
Mol. Microbiol
, vol.16
, pp. 687-697
-
-
Mach, R.L.1
Seiboth, B.2
Myasnikov, A.3
Gonzalez, R.4
Strauss, J.5
Harkki, A.M.6
Kubicek, C.P.7
-
6
-
-
0025602002
-
Cellobiose metabolism and cellobiohydrolase i biosynthesis by Trichoderma reesei
-
Fritscher, C., Messner, R., and Kubicek, C. P. (1990) Cellobiose metabolism and cellobiohydrolase I biosynthesis by Trichoderma reesei. Exp. Mycol. 14, 451-461
-
(1990)
Exp. Mycol
, vol.14
, pp. 451-461
-
-
Fritscher, C.1
Messner, R.2
Kubicek, C.P.3
-
7
-
-
0018668809
-
Formation and release of cellulolytic enzymes during growth of Trichoderma reesei on cellobiose and glycerol
-
Vaheri, M. P., Vaheri, M. E. O., and Kauppinen, V. S. (1979) Formation and release of cellulolytic enzymes during growth of Trichoderma reesei on cellobiose and glycerol. Appl. Microbiol. Biotechnol. 8, 73-80
-
(1979)
Appl. Microbiol. Biotechnol
, vol.8
, pp. 73-80
-
-
Vaheri, M.P.1
Vaheri, M.E.O.2
Kauppinen, V.S.3
-
8
-
-
0000992883
-
Sophorose as an inducer of cellulase in Trichoderma reesei
-
Mandels, M., Parrish, F. W., and Reese, E. T. (1962) Sophorose as an inducer of cellulase in Trichoderma reesei. J. Bacteriol. 83, 400-408
-
(1962)
J. Bacteriol
, vol.83
, pp. 400-408
-
-
Mandels, M.1
Parrish, F.W.2
Reese, E.T.3
-
9
-
-
77957347059
-
Cellodextrin transport in yeast for improved biofuel production
-
Galazka, J. M., Tian, C., Beeson, W. T., Martinez, B., Glass, N. L., and Cate, J. H. (2010) Cellodextrin transport in yeast for improved biofuel production. Science 330, 84-86
-
(2010)
Science
, vol.330
, pp. 84-86
-
-
Galazka, J.M.1
Tian, C.2
Beeson, W.T.3
Martinez, B.4
Glass, N.L.5
Cate, J.H.6
-
10
-
-
0025321953
-
The development of a heterologous transformation system for the cellulolytic fungus Trichoderma reesei based on a pyrG-negative mutant strain
-
Gruber, F., Visser, J., Kubicek, C. P., and de Graaff, L. H. (1990) The development of a heterologous transformation system for the cellulolytic fungus Trichoderma reesei based on a pyrG-negative mutant strain. Curr. Genet. 18, 71-76
-
(1990)
Curr. Genet
, vol.18
, pp. 71-76
-
-
Gruber, F.1
Visser, J.2
Kubicek, C.P.3
De Graaff, L.H.4
-
11
-
-
0033373342
-
Concurrent knock-out of at least 20 transporter genes is required to block uptake of hexoses in Saccharomyces cerevisiae
-
Wieczorke, R., Krampe, S., Weierstall, T., Freidel, K., Hollenberg, C. P., and Boles, E. (1999) Concurrent knock-out of at least 20 transporter genes is required to block uptake of hexoses in Saccharomyces cerevisiae. FEBS Lett. 464, 123-128
-
(1999)
FEBS Lett
, vol.464
, pp. 123-128
-
-
Wieczorke, R.1
Krampe, S.2
Weierstall, T.3
Freidel, K.4
Hollenberg, C.P.5
Boles, E.6
-
12
-
-
84868094883
-
Differential involvement of β-glucosidases from Hypocrea jecorina in rapid induction of cellulase genes by cellulose and cellobiose
-
Zhou, Q., Xu, J., Kou, Y., Lv, X., Zhang, X., Zhao, G., Zhang, W., Chen, G., and Liu, W. (2012) Differential involvement of β-glucosidases from Hypocrea jecorina in rapid induction of cellulase genes by cellulose and cellobiose. Eukaryotic Cell 11, 1371-1381
-
(2012)
Eukaryotic Cell
, vol.11
, pp. 1371-1381
-
-
Zhou, Q.1
Xu, J.2
Kou, Y.3
Lv, X.4
Zhang, X.5
Zhao, G.6
Zhang, W.7
Chen, G.8
Liu, W.9
-
13
-
-
34248559599
-
Gene splicing and mutagenesis by PCR-driven overlap extension
-
Heckman, K. L., and Pease, L. R. (2007) Gene splicing and mutagenesis by PCR-driven overlap extension. Nat. Protoc. 2, 924-932
-
(2007)
Nat. Protoc
, vol.2
, pp. 924-932
-
-
Heckman, K.L.1
Pease, L.R.2
-
14
-
-
0026562884
-
Improved method for high efficiency transformation of intact yeast cells
-
Gietz, D., St Jean, A., Woods, R. A., and Schiestl, R. H. (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res. 20, 1425
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 1425
-
-
Gietz, D.1
St Jean, A.2
Woods, R.A.3
Schiestl, R.H.4
-
15
-
-
0025634125
-
Cloning of the Trichoderma reesei pyrG gene and its use as a homologous marker for a high-frequency transformation system
-
Gruber, F., Visser, J., Kubicek, C. P., and de Graaff, L. H. (1990) Cloning of the Trichoderma reesei pyrG gene and its use as a homologous marker for a high-frequency transformation system. Curr. Genet. 18, 447-451
-
(1990)
Curr. Genet
, vol.18
, pp. 447-451
-
-
Gruber, F.1
Visser, J.2
Kubicek, C.P.3
De Graaff, L.H.4
-
16
-
-
0027947285
-
Transformation of Trichoderma reesei based on hygromycin B resistance using homologous expression signals
-
Mach, R. L., Schindler, M., and Kubicek, C. P. (1994) Transformation of Trichoderma reesei based on hygromycin B resistance using homologous expression signals. Curr. Genet. 25, 567-570
-
(1994)
Curr. Genet
, vol.25
, pp. 567-570
-
-
Mach, R.L.1
Schindler, M.2
Kubicek, C.P.3
-
17
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNASeq
-
Mortazavi, A., Williams, B. A., McCue, K., Schaeffer, L., and Wold, B. (2008) Mapping and quantifying mammalian transcriptomes by RNASeq. Nat. Methods 5, 621-628
-
(2008)
Nat. Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
18
-
-
0035829361
-
Controlling the false discovery rate in behavior genetics research
-
Benjamini, Y., Drai, D., Elmer, G., Kafkafi, N., and Golani, I. (2001) Controlling the false discovery rate in behavior genetics research. Behav. Brain Res. 125, 279-284
-
(2001)
Behav. Brain Res
, vol.125
, pp. 279-284
-
-
Benjamini, Y.1
Drai, D.2
Elmer, G.3
Kafkafi, N.4
Golani, I.5
-
19
-
-
0042858149
-
Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei
-
Foreman, P. K., Brown, D., Dankmeyer, L., Dean, R., Diener, S., Dunn-Coleman, N. S., Goedegebuur, F., Houfek, T. D., England, G. J., Kelley, A. S., Meerman, H. J., Mitchell, T., Mitchinson, C., Olivares, H. A., Teunissen, P. J., Yao, J., and Ward, M. (2003) Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei. J. Biol. Chem. 278, 31988-31997
-
(2003)
J. Biol. Chem
, vol.278
, pp. 31988-31997
-
-
Foreman, P.K.1
Brown, D.2
Dankmeyer, L.3
Dean, R.4
Diener, S.5
Dunn-Coleman, N.S.6
Goedegebuur, F.7
Houfek, T.D.8
England, G.J.9
Kelley, A.S.10
Meerman, H.J.11
Mitchell, T.12
Mitchinson, C.13
Olivares, H.A.14
Teunissen, P.J.15
Yao, J.16
Ward, M.17
-
20
-
-
36448991500
-
Clustal W and ClustalX version 2.0
-
Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J., and Higgins, D. G. (2007) Clustal W and ClustalX version 2.0. Bioinformatics 23, 2947-2948
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
21
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739
-
(2011)
Mol. Biol. Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
22
-
-
70349685126
-
Gene cloning, expression and characterization of a new cold-active and salttolerant endo-β-1,4-xylanase from marine Glaciecola mesophila KMM 241
-
Guo, B., Chen, X. L., Sun, C. Y., Zhou, B. C., and Zhang, Y. Z. (2009) Gene cloning, expression and characterization of a new cold-active and salttolerant endo-β-1,4-xylanase from marine Glaciecola mesophila KMM 241. Appl. Microbiol. Biotechnol. 84, 1107-1115
-
(2009)
Appl. Microbiol. Biotechnol
, vol.84
, pp. 1107-1115
-
-
Guo, B.1
Chen, X.L.2
Sun, C.Y.3
Zhou, B.C.4
Zhang, Y.Z.5
-
23
-
-
0003903343
-
-
3rd Ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Sambrook, J., and Russell, D. W. (2001) Molecular Cloning: A LaboratoryManual, 3rd Ed., p. 18.54, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(2001)
Molecular Cloning: A LaboratoryManual
, pp. 18-54
-
-
Sambrook, J.1
Russell, D.W.2
-
24
-
-
8644278216
-
Transcriptional response to glucose starvation and functional analysis of a glucose transporter of Neurospora crassa
-
Xie, X., Wilkinson, H. H., Correa, A., Lewis, Z. A., Bell-Pedersen, D., and Ebbole, D. J. (2004) Transcriptional response to glucose starvation and functional analysis of a glucose transporter of Neurospora crassa. Fungal Genet. Biol. 41, 1104-1119
-
(2004)
Fungal Genet. Biol
, vol.41
, pp. 1104-1119
-
-
Xie, X.1
Wilkinson, H.H.2
Correa, A.3
Lewis, Z.A.4
Bell-Pedersen, D.5
Ebbole, D.J.6
-
25
-
-
2342540411
-
Aspergillus niger mstA encodes a high-affinity sugar/ H+ symporter which is regulated in response to extracellular pH
-
Vankuyk, P. A., Diderich, J. A., MacCabe, A. P., Hererro, O., Ruijter, G. J., and Visser, J. (2004) Aspergillus niger mstA encodes a high-affinity sugar/ H+ symporter which is regulated in response to extracellular pH. Biochem. J. 379, 375-383
-
(2004)
Biochem. J
, vol.379
, pp. 375-383
-
-
Vankuyk, P.A.1
Diderich, J.A.2
Maccabe, A.P.3
Hererro, O.4
Ruijter, G.J.5
Visser, J.6
-
26
-
-
1242274644
-
Glucose sensing and signaling in Saccharomyces cerevisiae through the Rgt2 glucose sensor and casein kinase i
-
Moriya, H., and Johnston, M. (2004) Glucose sensing and signaling in Saccharomyces cerevisiae through the Rgt2 glucose sensor and casein kinase I. Proc. Natl. Acad. Sci. U.S.A. 101, 1572-1577
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 1572-1577
-
-
Moriya, H.1
Johnston, M.2
-
27
-
-
33845671822
-
Xyr1 (xylanase regulator 1) regulates both the hydrolytic enzyme system and D-xylose metabolism in Hypocrea jecorina
-
Stricker, A. R., Grosstessner-Hain, K., Würleitner, E., and Mach, R. L. (2006) Xyr1 (xylanase regulator 1) regulates both the hydrolytic enzyme system and D-xylose metabolism in Hypocrea jecorina. Eukaryotic Cell 5, 2128-2137
-
(2006)
Eukaryotic Cell
, vol.5
, pp. 2128-2137
-
-
Stricker, A.R.1
Grosstessner-Hain, K.2
Würleitner, E.3
Mach, R.L.4
-
28
-
-
84877263015
-
Systems analysis of lactose metabolism in Trichoderma reesei identifies a lactose permease that is essential for cellulase induction
-
Ivanova, C., Bååth, J. A., Seiboth, B., and Kubicek, C. P. (2013) Systems analysis of lactose metabolism in Trichoderma reesei identifies a lactose permease that is essential for cellulase induction. PLoS One 8, e62631
-
(2013)
PLoS One
, vol.8
-
-
Ivanova, C.1
Bååth, J.A.2
Seiboth, B.3
Kubicek, C.P.4
-
29
-
-
0026326567
-
Origin of oxidized cellulose degradation products and mechanism of their promotion of cellobiohydrolase i biosynthesis in Trichoderma reesei
-
Szakmary, K., Wottawa, A., and Kubicek, C. P. (1991) Origin of oxidized cellulose degradation products and mechanism of their promotion of cellobiohydrolase I biosynthesis in Trichoderma reesei. J. Gen. Microbiol. 137, 2873-2878
-
(1991)
J. Gen. Microbiol
, vol.137
, pp. 2873-2878
-
-
Szakmary, K.1
Wottawa, A.2
Kubicek, C.P.3
-
30
-
-
84859972859
-
Induction of lignocellulosedegrading enzymes in Neurospora crassa by cellodextrins
-
Znameroski, E. A., Coradetti, S. T., Roche, C. M., Tsai, J. C., Iavarone, A. T., Cate, J. H., and Glass, N. L. (2012) Induction of lignocellulosedegrading enzymes in Neurospora crassa by cellodextrins. Proc. Natl. Acad. Sci. U.S.A. 109, 6012-6017
-
(2012)
Proc. Natl. Acad. Sci. U.S.A
, vol.109
, pp. 6012-6017
-
-
Znameroski, E.A.1
Coradetti, S.T.2
Roche, C.M.3
Tsai, J.C.4
Iavarone, A.T.5
Cate, J.H.6
Glass, N.L.7
-
31
-
-
84878685056
-
Identification of major facilitator transporters involved in cellulase production during lactose culture of Trichoderma reesei PC-3-7
-
Porciuncula Jde, O., Furukawa, T., Shida, Y., Mori, K., Kuhara, S., Morikawa, Y., and Ogasawara, W. (2013) Identification of major facilitator transporters involved in cellulase production during lactose culture of Trichoderma reesei PC-3-7. Biosci. Biotechnol. Biochem. 77, 1014-1022
-
(2013)
Biosci. Biotechnol. Biochem
, vol.77
, pp. 1014-1022
-
-
Porciuncula Jde, O.1
Furukawa, T.2
Shida, Y.3
Mori, K.4
Kuhara, S.5
Morikawa, Y.6
Ogasawara, W.7
-
32
-
-
80054682244
-
From transporter to transceptor: Signaling from transporters provokes re-evaluation of complex trafficking and regulatory controls: Endocytic internalization and intracellular trafficking of nutrient transceptors may, at least in part, be governed by their signaling function
-
Kriel, J., Haesendonckx, S., Rubio-Texeira, M., Van Zeebroeck, G., and Thevelein, J. M. (2011) From transporter to transceptor: signaling from transporters provokes re-evaluation of complex trafficking and regulatory controls: endocytic internalization and intracellular trafficking of nutrient transceptors may, at least in part, be governed by their signaling function. BioEssays 33, 870-879
-
(2011)
BioEssays
, vol.33
, pp. 870-879
-
-
Kriel, J.1
Haesendonckx, S.2
Rubio-Texeira, M.3
Van Zeebroeck, G.4
Thevelein, J.M.5
-
33
-
-
0242437856
-
The Gap1 general amino acid permease acts as an amino acid sensor for activation of protein kinase A targets in the yeast Saccharomyces cerevisiae
-
Donaton, M. C., Holsbeeks, I., Lagatie, O., Van Zeebroeck, G., Crauwels, M., Winderickx, J., and Thevelein, J. M. (2003) The Gap1 general amino acid permease acts as an amino acid sensor for activation of protein kinase A targets in the yeast Saccharomyces cerevisiae. Mol. Microbiol. 50, 911-929
-
(2003)
Mol. Microbiol
, vol.50
, pp. 911-929
-
-
Donaton, M.C.1
Holsbeeks, I.2
Lagatie, O.3
Van Zeebroeck, G.4
Crauwels, M.5
Winderickx, J.6
Thevelein, J.M.7
-
34
-
-
77649249654
-
Transport and signaling through the phosphate-binding site of the yeast Pho84 phosphate transceptor
-
Popova, Y., Thayumanavan, P., Lonati, E., Agrochão, M., and Thevelein, J. M. (2010) Transport and signaling through the phosphate-binding site of the yeast Pho84 phosphate transceptor. Proc. Natl. Acad. Sci. U.S.A. 107, 2890-2895
-
(2010)
Proc. Natl. Acad. Sci. U.S.A
, vol.107
, pp. 2890-2895
-
-
Popova, Y.1
Thayumanavan, P.2
Lonati, E.3
Agrochão, M.4
Thevelein, J.M.5
-
35
-
-
51349144690
-
A Mep2-dependent transcriptional profile links permease function to gene expression during pseudohyphal growth in Saccharomyces cerevisiae
-
Rutherford, J. C., Chua, G., Hughes, T., Cardenas, M. E., and Heitman, J. (2008) A Mep2-dependent transcriptional profile links permease function to gene expression during pseudohyphal growth in Saccharomyces cerevisiae. Mol. Biol. Cell 19, 3028-3039
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 3028-3039
-
-
Rutherford, J.C.1
Chua, G.2
Hughes, T.3
Cardenas, M.E.4
Heitman, J.5
|