메뉴 건너뛰기




Volumn 3, Issue , 2013, Pages

Prevalence of psbA-containing cyanobacterial podoviruses in the ocean

Author keywords

[No Author keywords available]

Indexed keywords

PHOTOSYSTEM II; PHOTOSYSTEM II, PSBA SUBUNIT; SEA WATER;

EID: 84887647055     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep03207     Document Type: Article
Times cited : (11)

References (42)
  • 1
    • 0025198355 scopus 로고
    • Viral mortality of marine bacteria and cyanobacteria
    • Proctor, L. M. & Fuhrman, J. A. Viral mortality of marine bacteria and cyanobacteria. Nature 343, 60-62 (1990).
    • (1990) Nature , vol.343 , pp. 60-62
    • Proctor, L.M.1    Fuhrman, J.A.2
  • 2
    • 0033542481 scopus 로고    scopus 로고
    • Marine viruses and their biogeochemical and ecological effects
    • Fuhrman, J. A. Marine viruses and their biogeochemical and ecological effects. Nature 399, 541-548 (1999).
    • (1999) Nature , vol.399 , pp. 541-548
    • Fuhrman J., .A.1
  • 3
    • 25144506135 scopus 로고    scopus 로고
    • Viruses in the sea
    • DOI 10.1038/nature04160, PII N04160
    • Suttle, C. A. Viruses in the sea. Nature 437, 356-361 (2005). (Pubitemid 41613491)
    • (2005) Nature , vol.437 , Issue.7057 , pp. 356-361
    • Suttle, C.A.1
  • 4
    • 0027930755 scopus 로고
    • Dynamics and distribution of cyanophages and their effect on marine Synechococcus spp
    • Suttle, C. A. & Chan, A. M. Dynamics and distribution of cyanophages and their effect on marine Synechococcus spp. Appl Environ Microbiol 60, 3167-3174 (1994). (Pubitemid 24272340)
    • (1994) Applied and Environmental Microbiology , vol.60 , Issue.9 , pp. 3167-3174
    • Suttle, C.A.1    Chan, A.M.2
  • 5
    • 0027329223 scopus 로고
    • Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater
    • Waterbury, J. B. & Valois, F. W. Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater. Appl Environ Microbiol 59, 3393-3399 (1993). (Pubitemid 23296459)
    • (1993) Applied and Environmental Microbiology , vol.59 , Issue.10 , pp. 3393-3399
    • Waterbury, J.B.1    Valois, F.W.2
  • 6
    • 0027376914 scopus 로고
    • Isolation and molecular characterization of five marine cyanophages propagated on Synechococcus sp. Strain WH7803
    • Wilson, W. H., Joint, I. R., Carr, N. G. & Mann, N. H. Isolation and molecular characterization of five marine cyanophages propagated on Synechococcus sp. strain WH7803. Appl Environ Microbiol 59, 3736-3743 (1993). (Pubitemid 23327576)
    • (1993) Applied and Environmental Microbiology , vol.59 , Issue.11 , pp. 3736-3743
    • Wilson, W.H.1    Joint, I.R.2    Carr, N.G.3    Mann, N.H.4
  • 7
    • 0035403340 scopus 로고    scopus 로고
    • Distribution, Isolation, Host Specificity, and Diversity of Cyanophages Infecting Marine Synechococcus spp. in River Estuaries
    • DOI 10.1128/AEM.67.7.3285-3290.2001
    • Lu, J., Chen, F. & Hodson, R. E. Distribution, isolation, host specificity, and diversity of cyanophages infecting marine Synechococcus spp. in river estuaries. Appl Environ Microbiol 67, 3285-3290 (2001). (Pubitemid 33644804)
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.7 , pp. 3285-3290
    • Jingrang, L.U.1    Chen, F.2    Hudson, R.E.3
  • 8
    • 0043031198 scopus 로고    scopus 로고
    • Genetic diversity and temporal variation in the cyanophage community infecting marine Synechococcus species in Rhode Island's Coastal Waters
    • DOI 10.1128/AEM.69.8.4639-4647.2003
    • Marston, M. F. & Sallee, J. L. Genetic diversity and temporal variation in the cyanophage community infecting marine Synechococcus species in Rhode Island's coastal waters. Appl Environ Microbiol 69, 4639-4647 (2003). (Pubitemid 36992922)
    • (2003) Applied and Environmental Microbiology , vol.69 , Issue.8 , pp. 4639-4647
    • Marston, M.F.1    Sallee, J.L.2
  • 9
    • 0041375471 scopus 로고    scopus 로고
    • Cyanophages infecting the oceanic cyanobacterium Prochlorococcus
    • DOI 10.1038/nature01929
    • Sullivan, M. B., Waterbury, J. B. & Chisholm, S. W. Cyanophages infecting the oceanic cyanobacterium Prochlorococcus. Nature 424, 1047-1051 (2003). (Pubitemid 37064303)
    • (2003) Nature , vol.424 , Issue.6952 , pp. 1047-1051
    • Sullivan, M.B.1    Waterbury, J.B.2    Chisholm, S.W.3
  • 10
    • 38049123936 scopus 로고    scopus 로고
    • Prevalence of highly host-specific cyanophages in the estuarine environment
    • Wang, K. & Chen, F. Prevalence of highly host-specific cyanophages in the estuarine environment. Environ Microbiol 10, 300-312 (2007).
    • (2007) Environ Microbiol , vol.10 , pp. 300-312
    • Wang, K.1    Chen, F.2
  • 11
    • 84876489323 scopus 로고    scopus 로고
    • Genomes of marine cyanopodoviruses reveal multiple origins of diversity
    • Labrie, S. et al. Genomes of marine cyanopodoviruses reveal multiple origins of diversity. Environ Microbiol 15, 1356-1376 (2013).
    • (2013) Environ Microbiol , vol.15 , pp. 1356-1376
    • Labrie, S.1
  • 12
    • 84876502182 scopus 로고    scopus 로고
    • Diversity and evolutionary relationships of T7-like podoviruses infecting marine cyanobacteria
    • Dekel-Bird, N. P. et al. Diversity and evolutionary relationships of T7-like podoviruses infecting marine cyanobacteria. Environ Microbiol 15, 1476-1491 (2013).
    • (2013) Environ Microbiol , vol.15 , pp. 1476-1491
    • Dekel-Bird, N.P.1
  • 14
    • 33645461497 scopus 로고    scopus 로고
    • Transcription of a 'photosynthetic' T4-type phage during infection of a marine cyanobacterium
    • Clokie, M. R. J. et al. Transcription of a 'photosynthetic' T4-type phage during infection of a marine cyanobacterium. Environ Microbiol 8, 827-835 (2005).
    • (2005) Environ Microbiol , vol.8 , pp. 827-835
    • Clokie, M.R.J.1
  • 15
    • 33645876180 scopus 로고    scopus 로고
    • Virus isolation studies suggest short-term variations in abundance in natural cyanophage populations of the Indian Ocean
    • Clokie, M. R. J., Millard, A. D.,Mehta, J. Y. &Mann, N. H. Virus isolation studies suggest short-term variations in abundance in natural cyanophage populations of the Indian Ocean. J MAR BIOL ASSOC UK 86, 499-506 (2006).
    • (2006) J Mar Biol Assoc UK , vol.86 , pp. 499-506
    • Clokie, M.R.J.1    Millard, A.D.2    Mehta, J.Y.3    Mann, N.H.4
  • 17
    • 69949104491 scopus 로고    scopus 로고
    • Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence of Synechococcus host genes localized to a hyperplastic region: Implications for mechanisms of cyanophage evolution
    • Millard, A. D., Zwirglmaier, K., Downey, M. J., Mann, N. H. & Scanlan, D. J. Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence of Synechococcus host genes localized to a hyperplastic region: implications for mechanisms of cyanophage evolution. Environ Microbiol 11, 2370-2387 (2009).
    • (2009) Environ Microbiol , vol.11 , pp. 2370-2387
    • Millard, A.D.1    Zwirglmaier, K.2    Downey, M.J.3    Mann, N.H.4    Scanlan, D.J.5
  • 18
    • 21344461027 scopus 로고    scopus 로고
    • Three Prochlorococcus cyanophage genomes: Signature features and ecological interpretations
    • Sullivan, M. B., Coleman,M. L., Weigele, P., Rohwer, F. & Chisholm, S.W. Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations. PLoS Biol 3, e144 (2005).
    • (2005) PLoS Biol , vol.3
    • Sullivan, M.B.1    Coleman, M.L.2    Weigele, P.3    Rohwer, F.4    Chisholm, S.W.5
  • 19
    • 78249280297 scopus 로고    scopus 로고
    • Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments
    • Sullivan, M. B. et al. Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments. Environ Microbiol 12, 3035-3056 (2010).
    • (2010) Environ Microbiol , vol.12 , pp. 3035-3056
    • Sullivan, M.B.1
  • 20
    • 70350464284 scopus 로고    scopus 로고
    • The genome and structural proteome of an ocean siphovirus: A new window into the cyanobacterial 'mobilome'
    • Sullivan,M. B. et al. The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial 'mobilome'. Environ Microbiol 11, 2935-2951 (2009).
    • (2009) Environ Microbiol , vol.11 , pp. 2935-2951
    • Sullivan, M.B.1
  • 21
    • 77956987118 scopus 로고    scopus 로고
    • Ubiquitous cyanobacterial podoviruses in the global oceans unveiled through viral DNA polymerase gene sequences
    • Huang, S., Wilhelm, S. W., Jiao, N. & Chen, F. Ubiquitous cyanobacterial podoviruses in the global oceans unveiled through viral DNA polymerase gene sequences. ISME J 4, 1243-1251 (2010).
    • (2010) ISME J , vol.4 , pp. 1243-1251
    • Huang, S.1    Wilhelm, S.W.2    Jiao, N.3    Chen, F.4
  • 22
    • 0036255283 scopus 로고    scopus 로고
    • Genomic sequence and evolution of marine cyanophage P60: A new insight on lytic and lysogenic phages
    • DOI 10.1128/AEM.68.5.2589-2594.2002
    • Chen, F. & Lu, J. Genomic sequence and evolution of marine cyanophage P60: a new insight on lytic and lysogenic phages. Appl EnvironMicrobiol 68, 2589-2594 (2002). (Pubitemid 34477864)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.5 , pp. 2589-2594
    • Chen, F.1    Lu, J.2
  • 23
    • 33747369803 scopus 로고    scopus 로고
    • Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts
    • Sullivan,M. B., Lindell, D., Lee, J. A., Thompson, L. R., Bielawski, J. P. & Chisholm, S. W. Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts. PLoS Biol 4, e234 (2006).
    • (2006) PLoS Biol , vol.4
    • Sullivan, M.B.1    Lindell, D.2    Lee, J.A.3    Thompson, L.R.4    Bielawski, J.P.5    Chisholm, S.W.6
  • 25
    • 79551715241 scopus 로고    scopus 로고
    • Intracellular assembly of cyanophage Syn5 proceeds through a scaffold-containing procapsid
    • Raytcheva, D. A., Haase-Pettingell, C., Piret, J. M. & King, J. A. Intracellular assembly of cyanophage Syn5 proceeds through a scaffold-containing procapsid. J Virol 85, 2406-241 (2011).
    • (2011) J Virol , vol.85 , pp. 2406-3241
    • Raytcheva, D.A.1    Haase-Pettingell, C.2    Piret, J.M.3    King, J.A.4
  • 26
    • 0041736065 scopus 로고    scopus 로고
    • Marine ecosystems: Bacterial photosynthesis genes in a virus
    • Mann, N. H., Cook, A., Millard, A., Bailey, S. & Clokie, M. Marine ecosystems: bacterial photosynthesis genes in a virus. Nature 424, 741-741 (2003).
    • (2003) Nature , vol.424 , pp. 741-741
    • Mann, N.H.1    Cook, A.2    Millard, A.3    Bailey, S.4    Clokie, M.5
  • 27
    • 27744480467 scopus 로고    scopus 로고
    • Photosynthesis genes in marine viruses yield proteins during host infection
    • DOI 10.1038/nature04111, PII N04111
    • Lindell, D., Jaffe, J. D., Johnson, Z. I., Church, G. M. & Chisholm, S. W. Photosynthesis genes in marine viruses yield proteins during host infection. Nature 438, 86-89 (2005). (Pubitemid 41599824)
    • (2005) Nature , vol.438 , Issue.7064 , pp. 86-89
    • Lindell, D.1    Jaffe, J.D.2    Johnson, Z.I.3    Church, G.M.4    Chisholm, S.W.5
  • 29
    • 50949084124 scopus 로고    scopus 로고
    • Phylogenetic diversity of sequences of cyanophage photosynthetic gene psbA in marine and freshwaters
    • Chenard, C. & Suttle, C. A. Phylogenetic diversity of sequences of cyanophage photosynthetic gene psbA in marine and freshwaters. Appl EnvironMicrobiol 74, 5317-5324 (2008).
    • (2008) Appl EnvironMicrobiol , vol.74 , pp. 5317-5324
    • Chenard, C.1    Suttle, C.A.2
  • 30
    • 84856579879 scopus 로고    scopus 로고
    • Genome sequences of siphoviruses infecting marine Synechococcus unveil a diverse cyanophage group and extensive phage-host genetic exchanges
    • Huang, S., Wang, K., Jiao, N. & Chen, F. Genome sequences of siphoviruses infecting marine Synechococcus unveil a diverse cyanophage group and extensive phage-host genetic exchanges. Environ Microbiol 14, 540-558 (2012).
    • (2012) Environ Microbiol , vol.14 , pp. 540-558
    • Huang, S.1    Wang, K.2    Jiao, N.3    Chen, F.4
  • 31
    • 79955111696 scopus 로고    scopus 로고
    • Evidence of a dominant lineage of Vibrio cholerae-specific lytic bacteriophages shed by cholera patients over a 10-year period in Dhaka, Bangladesh
    • Seed, K. D. et al. Evidence of a dominant lineage of Vibrio cholerae-specific lytic bacteriophages shed by cholera patients over a 10-year period in Dhaka, Bangladesh. MBio 2, e00334-10 (2011).
    • (2011) MBio , vol.2
    • Seed, K.D.1
  • 32
    • 70350439595 scopus 로고    scopus 로고
    • Diverse and dynamic populations of cyanobacterial podoviruses in the Chesapeake Bay unveiled through DNA polymerase gene sequences
    • Chen, F. et al. Diverse and dynamic populations of cyanobacterial podoviruses in the Chesapeake Bay unveiled through DNA polymerase gene sequences. Environ Microbiol 11, 2884-2892 (2009).
    • (2009) Environ Microbiol , vol.11 , pp. 2884-2892
    • Chen, F.1
  • 33
    • 38149140067 scopus 로고    scopus 로고
    • Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes
    • Zwirglmaier, K. et al. Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes. Environ Microbiol 10, 147-161 (2008).
    • (2008) Environ Microbiol , vol.10 , pp. 147-161
    • Zwirglmaier, K.1
  • 34
    • 66749151555 scopus 로고    scopus 로고
    • Ecological genomics of marine picocyanobacteria
    • Scanlan, D. J. et al. Ecological genomics of marine picocyanobacteria. Microbiol Mol Biol Rev 73, 249-299 (2009).
    • (2009) Microbiol Mol Biol Rev , vol.73 , pp. 249-299
    • Scanlan, D.J.1
  • 35
    • 33947238287 scopus 로고    scopus 로고
    • The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through Eastern Tropical Pacific
    • Rusch, D. B. et al. The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through Eastern Tropical Pacific. PLoS Biol 5, 398-431 (2007).
    • (2007) PLoS Biol , vol.5 , pp. 398-431
    • Rusch, D.B.1
  • 36
    • 77956095592 scopus 로고    scopus 로고
    • Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing
    • Ghai, R. et al. Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing. ISME J 4, 1154-1166 (2010).
    • (2010) ISME J , vol.4 , pp. 1154-1166
    • Ghai, R.1
  • 38
    • 78649868522 scopus 로고    scopus 로고
    • Ecosystemspecific selection pressures revealed through comparative population genomics
    • Coleman, M. L. & Chisholm, S.W. Ecosystemspecific selection pressures revealed through comparative population genomics. Proc Natl Acad Sci USA 107, 18634-18639 (2010).
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 18634-18639
    • Coleman, M.L.1    Chisholm, S.W.2
  • 39
    • 33751059692 scopus 로고    scopus 로고
    • The marine viromes of four oceanic regions
    • Angly, F. E. et al. The marine viromes of four oceanic regions. PLoS Biol 4, e368 (2006).
    • (2006) PLoS Biol , vol.4
    • Angly, F.E.1
  • 40
    • 38849200974 scopus 로고    scopus 로고
    • Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data
    • Wilhelm, L., Tripp, H. J., Givan, S., Smith, D. & Giovannoni, S. Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data. Biology Direct 2, 27 (2007).
    • (2007) Biology Direct , vol.2 , pp. 27
    • Wilhelm, L.1    Tripp, H.J.2    Givan, S.3    Smith, D.4    Giovannoni, S.5
  • 41
    • 84874193410 scopus 로고    scopus 로고
    • Abundant SAR11 viruses in the ocean
    • Zhao, Y. et al. Abundant SAR11 viruses in the ocean. Nature 494, 357-360 (2013).
    • (2013) Nature , vol.494 , pp. 357-360
    • Zhao, Y.1
  • 42
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163 (2004).
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.