-
1
-
-
0033847562
-
Establishment of Pseudomonas aeruginosa infection: Lessons from a versatile opportunist
-
Lyczak JB, Cannon CL, Pier GB. 2000. Establishment of Pseudomonas aeruginosa infection: lessons from a versatile opportunist. Microbes Infect. 2:1051-1060.
-
(2000)
Microbes Infect
, vol.2
, pp. 1051-1060
-
-
Lyczak, J.B.1
Cannon, C.L.2
Pier, G.B.3
-
2
-
-
84865173458
-
Genetic and functional diversity of Pseudomonas aeruginosa lipopolysaccharide
-
Lam JS, Taylor VL, Islam ST, Hao Y, Kocíncová D. 2011. Genetic and functional diversity of Pseudomonas aeruginosa lipopolysaccharide. Front. Microbiol. 2:1-25.
-
(2011)
Front. Microbiol
, vol.2
, pp. 1-25
-
-
Lam, J.S.1
Taylor, V.L.2
Islam, S.T.3
Hao, Y.4
Kocíncová, D.5
-
3
-
-
84875910878
-
Wzx flippase-mediated membrane translocation of sugar polymer precursors in bacteria
-
Islam ST, Lam JS. 2013. Wzx flippase-mediated membrane translocation of sugar polymer precursors in bacteria. Environ. Microbiol. 15: 1001-1015.
-
(2013)
Environ. Microbiol
, vol.15
, pp. 1001-1015
-
-
Islam, S.T.1
Lam, J.S.2
-
4
-
-
79952152673
-
Membrane topology mapping of the O-antigen flippase (Wzx), polymerase (Wzy), and ligase (WaaL) from Pseudomonas aeruginosa PAO1 reveals novel domain architectures
-
doi:10.1128/mBio.00189-10
-
Islam ST, Taylor VL, Qi M, Lam JS. 2010. Membrane topology mapping of the O-antigen flippase (Wzx), polymerase (Wzy), and ligase (WaaL) from Pseudomonas aeruginosa PAO1 reveals novel domain architectures. mBio 1(3):e00189-10. doi:10.1128/mBio.00189-10.
-
(2010)
MBio
, vol.1
, Issue.3
-
-
Islam, S.T.1
Taylor, V.L.2
Qi, M.3
Lam, J.S.4
-
5
-
-
0032917464
-
Effect of wzx (rfbX) mutations on A-band and B-band lipopolysaccharide biosynthesis in Pseudomonas aeruginosa O5
-
Burrows LL, Lam JS. 1999. Effect of wzx (rfbX) mutations on A-band and B-band lipopolysaccharide biosynthesis in Pseudomonas aeruginosa O5. J. Bacteriol. 181:973-980.
-
(1999)
J. Bacteriol
, vol.181
, pp. 973-980
-
-
Burrows, L.L.1
Lam, J.S.2
-
6
-
-
84865157678
-
A cationic lumen in the Wzx flippase mediates anionic O-antigen subunit translocation in Pseudomonas aeruginosa PAO1
-
Islam ST, Fieldhouse RJ, Anderson EM, Taylor VL, Keates RA, Ford RC, Lam JS. 2012. A cationic lumen in the Wzx flippase mediates anionic O-antigen subunit translocation in Pseudomonas aeruginosa PAO1. Mol. Microbiol. 84:1165-1176.
-
(2012)
Mol. Microbiol
, vol.84
, pp. 1165-1176
-
-
Islam, S.T.1
Fieldhouse, R.J.2
Anderson, E.M.3
Taylor, V.L.4
Keates, R.A.5
Ford, R.C.6
Lam, J.S.7
-
7
-
-
0029998771
-
An O-antigen processing function for Wzx (RfbX): A promising candidate for O-unit flippase
-
Liu D, Cole RA, Reeves PR. 1996. An O-antigen processing function for Wzx (RfbX): a promising candidate for O-unit flippase. J. Bacteriol. 178: 2102-2107.
-
(1996)
J. Bacteriol
, vol.178
, pp. 2102-2107
-
-
Liu, D.1
Cole, R.A.2
Reeves, P.R.3
-
8
-
-
0029037440
-
Molecular cloning and characterization of the rfc gene of Pseudomonas aeruginosa (serotype O5)
-
de Kievit TR, Dasgupta T, Schweizer H, Lam JS. 1995. Molecular cloning and characterization of the rfc gene of Pseudomonas aeruginosa (serotype O5). Mol. Microbiol. 16:565-574.
-
(1995)
Mol. Microbiol
, vol.16
, pp. 565-574
-
-
de Kievit, T.R.1
Dasgupta, T.2
Schweizer, H.3
Lam, J.S.4
-
9
-
-
79957993746
-
Dual conserved periplasmic loops possess essential charge characteristics that support a catch-and-release mechanism of O-antigen polymerization by Wzy in Pseudomonas aeruginosa PAO1
-
Islam ST, Gold AC, Taylor VL, Anderson EM, Ford RC, Lam JS. 2011. Dual conserved periplasmic loops possess essential charge characteristics that support a catch-and-release mechanism of O-antigen polymerization by Wzy in Pseudomonas aeruginosa PAO1. J. Biol. Chem. 286: 20600-20605.
-
(2011)
J. Biol. Chem
, vol.286
, pp. 20600-20605
-
-
Islam, S.T.1
Gold, A.C.2
Taylor, V.L.3
Anderson, E.M.4
Ford, R.C.5
Lam, J.S.6
-
10
-
-
77952491040
-
In vitro bacterial polysaccharide biosynthesis: Defining the functions of Wzy and Wzz
-
Woodward R, Yi W, Li L, Zhao G, Eguchi H, Sridhar PR, Guo H, Song JK, Motari E, Cai L, Kelleher P, Liu X, Han W, Zhang W, Ding Y, Li M, Wang PG. 2010. In vitro bacterial polysaccharide biosynthesis: defining the functions of Wzy and Wzz. Nat. Chem. Biol. 6:418-423.
-
(2010)
Nat. Chem. Biol
, vol.6
, pp. 418-423
-
-
Woodward, R.1
Yi, W.2
Li, L.3
Zhao, G.4
Eguchi, H.5
Sridhar, P.R.6
Guo, H.7
Song, J.K.8
Motari, E.9
Cai, L.10
Kelleher, P.11
Liu, X.12
Han, W.13
Zhang, W.14
Ding, Y.15
Li, M.16
Wang, P.G.17
-
11
-
-
0031038569
-
Pseudomonas aeruginosa B-band O-antigen chain length is modulated by Wzz (Ro1)
-
Burrows LL, Chow D, Lam JS. 1997. Pseudomonas aeruginosa B-band O-antigen chain length is modulated by Wzz (Ro1). J. Bacteriol. 179: 1482-1489.
-
(1997)
J. Bacteriol
, vol.179
, pp. 1482-1489
-
-
Burrows, L.L.1
Chow, D.2
Lam, J.S.3
-
12
-
-
0036942209
-
Pseudomonas aeruginosa O-antigen chain length is determined before ligation to lipid A core
-
Daniels C, Griffiths C, Cowles B, Lam JS. 2002. Pseudomonas aeruginosa O-antigen chain length is determined before ligation to lipid A core. Environ. Microbiol. 4:883-897.
-
(2002)
Environ. Microbiol
, vol.4
, pp. 883-897
-
-
Daniels, C.1
Griffiths, C.2
Cowles, B.3
Lam, J.S.4
-
13
-
-
17644381899
-
Functional characterization of WaaL, a ligase associated with linking O-antigen polysaccharide to the core of Pseudomonas aeruginosa lipopolysaccharide
-
Abeyrathne PD, Daniels C, Poon KK, Matewish MJ, Lam JS. 2005. Functional characterization of WaaL, a ligase associated with linking O-antigen polysaccharide to the core of Pseudomonas aeruginosa lipopolysaccharide. J. Bacteriol. 187:3002-3012.
-
(2005)
J. Bacteriol
, vol.187
, pp. 3002-3012
-
-
Abeyrathne, P.D.1
Daniels, C.2
Poon, K.K.3
Matewish, M.J.4
Lam, J.S.5
-
14
-
-
34547860486
-
WaaL of Pseudomonas aeruginosa utilizes ATP in in vitro ligation of O antigen onto lipid A-core
-
Abeyrathne PD, Lam JS. 2007. WaaL of Pseudomonas aeruginosa utilizes ATP in in vitro ligation of O antigen onto lipid A-core. Mol. Microbiol. 65:1345-1359.
-
(2007)
Mol. Microbiol
, vol.65
, pp. 1345-1359
-
-
Abeyrathne, P.D.1
Lam, J.S.2
-
16
-
-
0037337313
-
The multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily
-
Hvorup RN, Winnen B, Chang AB, Jiang Y, Zhou XF, Saier MH, Jr. 2003. The multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily. Eur. J. Biochem. 270:799-813.
-
(2003)
Eur. J. Biochem
, vol.270
, pp. 799-813
-
-
Hvorup, R.N.1
Winnen, B.2
Chang, A.B.3
Jiang, Y.4
Zhou, X.F.5
Saier Jr., M.H.6
-
17
-
-
64649085938
-
Multidrug efflux transporters in the MATE family
-
Kuroda T, Tsuchiya T. 2009. Multidrug efflux transporters in the MATE family. Biochim. Biophys. Acta 1794:763-768.
-
(2009)
Biochim. Biophys. Acta
, vol.1794
, pp. 763-768
-
-
Kuroda, T.1
Tsuchiya, T.2
-
18
-
-
77958596325
-
Structure of a cation-bound multidrug and toxic compound extrusion transporter
-
He X, Szewczyk P, Karyakin A, Evin M, Hong WX, Zhang Q, Chang G. 2010. Structure of a cation-bound multidrug and toxic compound extrusion transporter. Nature 467:991-994.
-
(2010)
Nature
, vol.467
, pp. 991-994
-
-
He, X.1
Szewczyk, P.2
Karyakin, A.3
Evin, M.4
Hong, W.X.5
Zhang, Q.6
Chang, G.7
-
19
-
-
28044441589
-
Gene cloning and characterization of four MATE family multidrug efflux pumps from Vibrio cholerae non-O1
-
Begum A, Rahman MM, Ogawa W, Mizushima T, Kuroda T, Tsuchiya T. 2005. Gene cloning and characterization of four MATE family multidrug efflux pumps from Vibrio cholerae non-O1. Microbiol. Immunol. 49:949-957.
-
(2005)
Microbiol. Immunol
, vol.49
, pp. 949-957
-
-
Begum, A.1
Rahman, M.M.2
Ogawa, W.3
Mizushima, T.4
Kuroda, T.5
Tsuchiya, T.6
-
20
-
-
0346991732
-
An H-coupled multidrug efflux pump, PmpM, a member of the MATE family of transporters, from Pseudomonas aeruginosa
-
He GX, Kuroda T, Mima T, Morita Y, Mizushima T, Tsuchiya T. 2004. An H-coupled multidrug efflux pump, PmpM, a member of the MATE family of transporters, from Pseudomonas aeruginosa. J. Bacteriol. 186: 262-265.
-
(2004)
J. Bacteriol
, vol.186
, pp. 262-265
-
-
He, G.X.1
Kuroda, T.2
Mima, T.3
Morita, Y.4
Mizushima, T.5
Tsuchiya, T.6
-
21
-
-
0038647631
-
Gene cloning and characterization of VcrM, a Na-coupled multidrug efflux pump, from Vibrio cholerae non-O1
-
Huda MN, Chen J, Morita Y, Kuroda T, Mizushima T, Tsuchiya T. 2003. Gene cloning and characterization of VcrM, a Na-coupled multidrug efflux pump, from Vibrio cholerae non-O1. Microbiol. Immunol. 47:419-427.
-
(2003)
Microbiol. Immunol
, vol.47
, pp. 419-427
-
-
Huda, M.N.1
Chen, J.2
Morita, Y.3
Kuroda, T.4
Mizushima, T.5
Tsuchiya, T.6
-
22
-
-
0038607122
-
Evidence that the wzxE gene of Escherichia coli K-12 encodes a protein involved in the transbilayer movement of a trisaccharide-lipid intermediate in the assembly of enterobacterial common antigen
-
Rick PD, Barr K, Sankaran K, Kajimura J, Rush JS, Waechter CJ. 2003. Evidence that the wzxE gene of Escherichia coli K-12 encodes a protein involved in the transbilayer movement of a trisaccharide-lipid intermediate in the assembly of enterobacterial common antigen. J. Biol. Chem. 278:16534-16542.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 16534-16542
-
-
Rick, P.D.1
Barr, K.2
Sankaran, K.3
Kajimura, J.4
Rush, J.S.5
Waechter, C.J.6
-
23
-
-
84876297961
-
Structural basis for the drug extrusion mechanism by a MATE multidrug transporter
-
Tanaka Y, Hipolito CJ, Maturana AD, Ito K, Kuroda T, Higuchi T, Katoh T, Kato HE, Hattori M, Kumazaki K, Tsukazaki T, Ishitani R, Suga H, Nureki O. 2013. Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature 496:247-251.
-
(2013)
Nature
, vol.496
, pp. 247-251
-
-
Tanaka, Y.1
Hipolito, C.J.2
Maturana, A.D.3
Ito, K.4
Kuroda, T.5
Higuchi, T.6
Katoh, T.7
Kato, H.E.8
Hattori, M.9
Kumazaki, K.10
Tsukazaki, T.11
Ishitani, R.12
Suga, H.13
Nureki, O.14
-
24
-
-
33645454462
-
Optimization of membrane protein overexpression and purification using GFP fusions
-
Drew D, Lerch M, Kunji E, Slotboom DJ, de Gier JW. 2006. Optimization of membrane protein overexpression and purification using GFP fusions. Nat. Methods 3:303-313.
-
(2006)
Nat. Methods
, vol.3
, pp. 303-313
-
-
Drew, D.1
Lerch, M.2
Kunji, E.3
Slotboom, D.J.4
de Gier, J.W.5
-
25
-
-
84868243529
-
Cystic fibrosis transmembrane conductance regulator (CFTR) potentiator VX-770 (Ivacaftor) opens the defective channel gate of mutant CFTR in a phosphorylation-dependent but ATP-independent manner
-
Eckford PD, Li C, Ramjeesingh M, Bear CE. 2012. Cystic fibrosis transmembrane conductance regulator (CFTR) potentiator VX-770 (Ivacaftor) opens the defective channel gate of mutant CFTR in a phosphorylation-dependent but ATP-independent manner. J. Biol. Chem. 287:36639-36649.
-
(2012)
J. Biol. Chem
, vol.287
, pp. 36639-36649
-
-
Eckford, P.D.1
Li, C.2
Ramjeesingh, M.3
Bear, C.E.4
-
26
-
-
80051966444
-
Structural basis for alginate secretion across the bacterial outer membrane
-
Whitney JC, Hay ID, Li C, Eckford PD, Robinson H, Amaya MF, Wood LF, Ohman DE, Bear CE, Rehm BH, Howell LP. 2011. Structural basis for alginate secretion across the bacterial outer membrane. Proc. Natl. Acad. Sci. U. S. A. 108:13083-13088.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A
, vol.108
, pp. 13083-13088
-
-
Whitney, J.C.1
Hay, I.D.2
Li, C.3
Eckford, P.D.4
Robinson, H.5
Amaya, M.F.6
Wood, L.F.7
Ohman, D.E.8
Bear, C.E.9
Rehm, B.H.10
Howell, L.P.11
-
27
-
-
0036134936
-
VmrA, a member of a novel class of Na-coupled multidrug efflux pumps from Vibrio parahaemolyticus
-
Chen J, Morita Y, Huda MN, Kuroda T, Mizushima T, Tsuchiya T. 2002. VmrA, a member of a novel class of Na-coupled multidrug efflux pumps from Vibrio parahaemolyticus. J. Bacteriol. 184:572-576.
-
(2002)
J. Bacteriol
, vol.184
, pp. 572-576
-
-
Chen, J.1
Morita, Y.2
Huda, M.N.3
Kuroda, T.4
Mizushima, T.5
Tsuchiya, T.6
-
28
-
-
0035949635
-
Na-driven multidrug efflux pump VcmA from Vibrio cholerae non-O1, a non-halophilic bacterium
-
Huda MN, Morita Y, Kuroda T, Mizushima T, Tsuchiya T. 2001. Na-driven multidrug efflux pump VcmA from Vibrio cholerae non-O1, a non-halophilic bacterium. FEMS Microbiol. Lett. 203:235-239.
-
(2001)
FEMS Microbiol. Lett
, vol.203
, pp. 235-239
-
-
Huda, M.N.1
Morita, Y.2
Kuroda, T.3
Mizushima, T.4
Tsuchiya, T.5
-
29
-
-
50949102768
-
Functional cloning and characterization of the multidrug efflux pumps NorM from Neisseria gonorrhoeae and YdhE from Escherichia coli. Antimicrob
-
Long F, Rouquette-Loughlin C, Shafer WM, Yu EW. 2008. Functional cloning and characterization of the multidrug efflux pumps NorM from Neisseria gonorrhoeae and YdhE from Escherichia coli. Antimicrob. Agents Chemother. 52:3052-3060.
-
(2008)
Agents Chemother
, vol.52
, pp. 3052-3060
-
-
Long, F.1
Rouquette-Loughlin, C.2
Shafer, W.M.3
Yu, E.W.4
-
30
-
-
0034459552
-
NorM of Vibrio parahaemolyticus is an Na-driven multidrug efflux pump
-
Morita Y, Kataoka A, Shiota S, Mizushima T, Tsuchiya T. 2000. NorM of Vibrio parahaemolyticus is an Na-driven multidrug efflux pump. J. Bacteriol. 182:6694-6697.
-
(2000)
J. Bacteriol
, vol.182
, pp. 6694-6697
-
-
Morita, Y.1
Kataoka, A.2
Shiota, S.3
Mizushima, T.4
Tsuchiya, T.5
-
31
-
-
84862192588
-
Accurate de novo structure prediction of large transmembrane protein domains using fragment-assembly and correlated mutation analysis
-
doi: 10.1073/pnas.1120036109
-
Nugent T, Jones DT. 2012. Accurate de novo structure prediction of large transmembrane protein domains using fragment-assembly and correlated mutation analysis. Proc. Natl. Acad. Sci. U. S. A. 109:E1540-E1547. doi: 10.1073/pnas.1120036109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A
, vol.109
-
-
Nugent, T.1
Jones, D.T.2
-
32
-
-
84858133323
-
Homology modeling of transporter proteins (carriers and ion channels)
-
In Orry AJW, Abagyan R, Humana Press, New York, NY
-
Ravna AW, Sylte I. 2012. Homology modeling of transporter proteins (carriers and ion channels), p 281-299. In Orry AJW, Abagyan R (ed), Homology modeling: methods and Protocols, vol 857. Humana Press, New York, NY.
-
(2012)
Homology Modeling: Methods and Protocols
, vol.857
, pp. 281-299
-
-
Ravna, A.W.1
Sylte, I.2
-
33
-
-
17644392830
-
TM-align: A protein structure alignment algorithm based on the TM-score
-
Zhang Y, Skolnick J. 2005. TM-align: a protein structure alignment algorithm based on the TM-score. Nucleic Acids Res. 33:2302-2309.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2302-2309
-
-
Zhang, Y.1
Skolnick, J.2
-
34
-
-
77958533259
-
Structural biology: Last of the multidrug transporters
-
van Veen HW. 2010. Structural biology: last of the multidrug transporters. Nature 467:926-927.
-
(2010)
Nature
, vol.467
, pp. 926-927
-
-
van Veen, H.W.1
-
35
-
-
0025877963
-
Spectral and photophysical studies of benzo[c]xanthene dyes: Dual emission pH sensors
-
Whitaker JE, Haugland RP, Prendergast FG. 1991. Spectral and photophysical studies of benzo[c]xanthene dyes: dual emission pH sensors. Anal. Biochem. 194:330-344.
-
(1991)
Anal. Biochem
, vol.194
, pp. 330-344
-
-
Whitaker, J.E.1
Haugland, R.P.2
Prendergast, F.G.3
-
36
-
-
78650297251
-
The structural basis of secondary active transport mechanisms
-
Forrest LR, Krämer R, Ziegler C. 2011. The structural basis of secondary active transport mechanisms. Biochim. Biophys. Acta 1807:167-188.
-
(2011)
Biochim. Biophys. Acta
, vol.1807
, pp. 167-188
-
-
Forrest, L.R.1
Krämer, R.2
Ziegler, C.3
-
37
-
-
33746548445
-
Identification and functional characterization of a new human kidney-specific H /organic cation antiporter, kidneyspecific multidrug and toxin extrusion 2
-
Masuda S, Terada T, Yonezawa A, Tanihara Y, Kishimoto K, Katsura T, Ogawa O, Inui KJ. 2006. Identification and functional characterization of a new human kidney-specific H /organic cation antiporter, kidneyspecific multidrug and toxin extrusion 2. J. Am. Soc. Nephrol. 17: 2127-2135.
-
(2006)
J. Am. Soc. Nephrol
, vol.17
, pp. 2127-2135
-
-
Masuda, S.1
Terada, T.2
Yonezawa, A.3
Tanihara, Y.4
Kishimoto, K.5
Katsura, T.6
Ogawa, O.7
Inui, K.J.8
-
38
-
-
29144523534
-
A human transporter protein that mediates the final excretion step for toxic organic cations
-
Otsuka M, Matsumoto T, Morimoto R, Arioka S, Omote H, Moriyama Y. 2005. A human transporter protein that mediates the final excretion step for toxic organic cations. Proc. Natl. Acad. Sci. U. S. A. 102: 17923-17928.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A
, vol.102
, pp. 17923-17928
-
-
Otsuka, M.1
Matsumoto, T.2
Morimoto, R.3
Arioka, S.4
Omote, H.5
Moriyama, Y.6
-
39
-
-
84873431135
-
Structures of a Na-coupled, substrate-bound MATE multidrug transporter
-
Lu M, Symersky J, Radchenko M, Koide A, Guo Y, Nie R, Koide S. 2013. Structures of a Na-coupled, substrate-bound MATE multidrug transporter. Proc. Natl. Acad. Sci. U. S. A. 110:2099-2104.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A
, vol.110
, pp. 2099-2104
-
-
Lu, M.1
Symersky, J.2
Radchenko, M.3
Koide, A.4
Guo, Y.5
Nie, R.6
Koide, S.7
-
40
-
-
84856927958
-
Ion binding and internal hydration in the multidrug resistance secondary active transporter NorM investigated by molecular dynamics simulations
-
Vanni S, Campomanes P, Marcia M, Rothlisberger U. 2012. Ion binding and internal hydration in the multidrug resistance secondary active transporter NorM investigated by molecular dynamics simulations. Biochemistry 51:1281-1287.
-
(2012)
Biochemistry
, vol.51
, pp. 1281-1287
-
-
Vanni, S.1
Campomanes, P.2
Marcia, M.3
Rothlisberger, U.4
-
41
-
-
14244266607
-
Identification of essential amino acid residues of the NorM Na /multidrug antiporter in Vibrio parahaemolyticus
-
Otsuka M, Yasuda M, Morita Y, Otsuka C, Tsuchiya T, Omote H, Moriyama Y. 2005. Identification of essential amino acid residues of the NorM Na /multidrug antiporter in Vibrio parahaemolyticus. J. Bacteriol. 187:1552-1558.
-
(2005)
J. Bacteriol
, vol.187
, pp. 1552-1558
-
-
Otsuka, M.1
Yasuda, M.2
Morita, Y.3
Otsuka, C.4
Tsuchiya, T.5
Omote, H.6
Moriyama, Y.7
-
42
-
-
78649365640
-
Membrane topology and identification of critical amino acid residues in the Wzx O-antigen translocase from Escherichia coli
-
Marolda CL, Li B, Lung M, Yang M, Hanuszkiewicz A, Rosales AR, Valvano MA. 2010. Membrane topology and identification of critical amino acid residues in the Wzx O-antigen translocase from Escherichia coli. J. Bacteriol. 192:6160-6171.
-
(2010)
J. Bacteriol
, vol.192
, pp. 6160-6171
-
-
Marolda, C.L.1
Li, B.2
Lung, M.3
Yang, M.4
Hanuszkiewicz, A.5
Rosales, A.R.6
Valvano, M.A.7
-
43
-
-
84885445028
-
Topological mapping methods for ÷-helical bacterial membrane proteins-an update and a guide
-
doi:10.1002/mbo3.72
-
Islam ST, Lam JS. 2013. Topological mapping methods for ÷-helical bacterial membrane proteins-an update and a guide. MicrobiologyOpen 2:350-364. doi:10.1002/mbo3.72.
-
(2013)
MicrobiologyOpen
, vol.2
, pp. 350-364
-
-
Islam, S.T.1
Lam, J.S.2
-
44
-
-
79951630927
-
Membrane topology and identification of critical amino acid residues in the Wzx O-antigen translocase from Escherichia coli
-
Marolda CL, Li B, Lung M, Yang M, Hanuszkiewicz A, Rosales AR, Valvano MA. 2011. Membrane topology and identification of critical amino acid residues in the Wzx O-antigen translocase from Escherichia coli. J. Bacteriol. 193:1291-1292.
-
(2011)
J. Bacteriol
, vol.193
, pp. 1291-1292
-
-
Marolda, C.L.1
Li, B.2
Lung, M.3
Yang, M.4
Hanuszkiewicz, A.5
Rosales, A.R.6
Valvano, M.A.7
-
45
-
-
0346734230
-
Molecular cloning and characterization of the HmrM multidrug efflux pump from Haemophilus influenzae Rd
-
Xu XJ, Su XZ, Morita Y, Kuroda T, Mizushima T, Tsuchiya T. 2003. Molecular cloning and characterization of the HmrM multidrug efflux pump from Haemophilus influenzae Rd. Microbiol. Immunol. 47: 937-943.
-
(2003)
Microbiol. Immunol
, vol.47
, pp. 937-943
-
-
Xu, X.J.1
Su, X.Z.2
Morita, Y.3
Kuroda, T.4
Mizushima, T.5
Tsuchiya, T.6
-
46
-
-
78650075360
-
Investigation of cationinteractions in sugar-binding proteins
-
Elumalai P, Rajasekaran M, Liu HL, Chen C. 2010. Investigation of cationinteractions in sugar-binding proteins. Protoplasma 247:13-24.
-
(2010)
Protoplasma
, vol.247
, pp. 13-24
-
-
Elumalai, P.1
Rajasekaran, M.2
Liu, H.L.3
Chen, C.4
-
47
-
-
33847317012
-
Sequence and structural features of carbohydrate binding in proteins and assessment of predictability using a neural network
-
doi:10.1186/1472-6807-7-1
-
Malik A, Ahmad S. 2007. Sequence and structural features of carbohydrate binding in proteins and assessment of predictability using a neural network. BMC Struct. Biol. 7:1. doi:10.1186/1472-6807-7-1.
-
(2007)
BMC Struct. Biol
, vol.7
, pp. 1
-
-
Malik, A.1
Ahmad, S.2
-
48
-
-
84055217548
-
Synthesis and properties of molecular probes for the rescue site on mutant cystic fibrosis transmembrane conductance regulator
-
Alkhouri B, Denning RA, Kim Chiaw P, Eckford PD, Yu W, Li C, Bogojeski JJ, Bear CE, Viirre RD. 2011. Synthesis and properties of molecular probes for the rescue site on mutant cystic fibrosis transmembrane conductance regulator. J. Med. Chem. 54:8693-8701.
-
(2011)
J. Med. Chem
, vol.54
, pp. 8693-8701
-
-
Alkhouri, B.1
Denning, R.A.2
Kim, C.P.3
Eckford, P.D.4
Yu, W.5
Li, C.6
Bogojeski, J.J.7
Bear, C.E.8
Viirre, R.D.9
-
49
-
-
59849091513
-
Direct interaction of a small-molecule modulator with G551D-CFTR, a cystic fibrosis-causing mutation associated with severe disease
-
Pasyk S, Li C, Ramjeesingh M, Bear CE. 2009. Direct interaction of a small-molecule modulator with G551D-CFTR, a cystic fibrosis-causing mutation associated with severe disease. Biochem. J. 418:185-190.
-
(2009)
Biochem. J
, vol.418
, pp. 185-190
-
-
Pasyk, S.1
Li, C.2
Ramjeesingh, M.3
Bear, C.E.4
-
50
-
-
80055082271
-
Accelerated profile HMM searches
-
Eddy SR. 2011. Accelerated profile HMM searches. PLOS Comput. Biol. 7:e1002195. http://dx.doi.org/10.1371/journal.pcbi.1002195.
-
(2011)
PLOS Comput. Biol
, vol.7
-
-
Eddy, S.R.1
-
52
-
-
84856090271
-
PSICOV: Precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments
-
Jones DT, Buchan DW, Cozzetto D, Pontil M. 2012. PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments. Bioinformatics 28:184-190.
-
(2012)
Bioinformatics
, vol.28
, pp. 184-190
-
-
Jones, D.T.1
Buchan, D.W.2
Cozzetto, D.3
Pontil, M.4
-
53
-
-
77954287478
-
Protein annotation and modelling servers at University College London
-
doi:10.1093/nar/gkq427
-
Buchan DW, Ward SM, Lobley AE, Nugent TC, Bryson K, Jones DT. 2010. Protein annotation and modelling servers at University College London. Nucleic Acids Res. 38:W563-W568. doi:10.1093/nar/gkq427.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Buchan, D.W.1
Ward, S.M.2
Lobley, A.E.3
Nugent, T.C.4
Bryson, K.5
Jones, D.T.6
-
54
-
-
84866158866
-
Detecting pore-lining regions in transmembrane protein sequences
-
doi:10.1186/1471-2105-13-169
-
Nugent T, Jones DT. 2012. Detecting pore-lining regions in transmembrane protein sequences. BMC Bioinformatics 13:169. doi:10.1186/1471-2105-13-169.
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 169
-
-
Nugent, T.1
Jones, D.T.2
-
55
-
-
77951961719
-
How significant is a protein structure similarity with TM-score 0.5?
-
Xu J, Zhang Y. 2010. How significant is a protein structure similarity with TM-score 0.5? Bioinformatics 26:889-895.
-
(2010)
Bioinformatics
, vol.26
, pp. 889-895
-
-
Xu, J.1
Zhang, Y.2
|