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Volumn 63, Issue PART 11, 2013, Pages 4006-4011

Gracilimonas rosea sp. nov., isolated from tropical seawater, and emended description of the genus Gracilimonas

Author keywords

[No Author keywords available]

Indexed keywords

CARDIOLIPIN; FATTY ACID; GENOMIC DNA; GLYCOLIPID; INORGANIC SALT; LIPID; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; PHOSPHOLIPID; QUINONE DERIVATIVE; RNA 16S; SEA WATER;

EID: 84887083055     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.052340-0     Document Type: Article
Times cited : (15)

References (34)
  • 2
    • 0030893297 scopus 로고    scopus 로고
    • The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera
    • Anzai, Y., Kudo, Y. & Oyaizu, H. (1997). The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera. Int J Syst Bacteriol 47, 249-251.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 249-251
    • Anzai, Y.1    Kudo, Y.2    Oyaizu, H.3
  • 3
    • 0035196769 scopus 로고    scopus 로고
    • Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment
    • Bruns, A., Rohde, M. & Berthe-Corti, L. (2001). Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. Int J Syst Evol Microbiol 51, 1997-2006.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1997-2006
    • Bruns, A.1    Rohde, M.2    Berthe-Corti, L.3
  • 5
    • 67649744171 scopus 로고    scopus 로고
    • Gracilimonas tropica gen. nov., sp. nov., isolated from a Synechococcus culture
    • Choi, D. H., Zhang, G. I., Noh, J. H., Kim, W. S. & Cho, B. C. (2009). Gracilimonas tropica gen. nov., sp. nov., isolated from a Synechococcus culture. Int J Syst Evol Microbiol 59, 1167-1172.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1167-1172
    • Choi, D.H.1    Zhang, G.I.2    Noh, J.H.3    Kim, W.S.4    Cho, B.C.5
  • 7
    • 77956867761 scopus 로고
    • Analysis of isoprenoid quinones
    • Collins, M. D. (1985). Analysis of isoprenoid quinones. Methods Microbiol 18, 329-366.
    • (1985) Methods Microbiol , vol.18 , pp. 329-366
    • Collins, M.D.1
  • 8
    • 0034525436 scopus 로고    scopus 로고
    • A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the polymerase chain reaction
    • Englen, M. D. & Kelley, L. C. (2000). A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the polymerase chain reaction. Lett Appl Microbiol 31, 421-426.
    • (2000) Lett Appl Microbiol , vol.31 , pp. 421-426
    • Englen, M.D.1    Kelley, L.C.2
  • 9
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 10
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 12
    • 0025812508 scopus 로고
    • Improved method for phenotypical characterization of marine bacteria
    • Høvik Hansen, G. & Sørheim, R. (1991). Improved method for phenotypical characterization of marine bacteria. J Microbiol Methods 13, 231-241.
    • (1991) J Microbiol Methods , vol.13 , pp. 231-241
    • Høvik, H.G.1    Sørheim, R.2
  • 13
    • 33747883185 scopus 로고    scopus 로고
    • Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter
    • Hwang, C. Y., Choi, D. H. & Cho, B. C. (2006). Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter. Int J Syst Evol Microbiol 56, 1831-1836.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 1831-1836
    • Hwang, C.Y.1    Choi, D.H.2    Cho, B.C.3
  • 14
    • 84878845810 scopus 로고    scopus 로고
    • Pontimonas salivibrio gen. nov., sp. nov., a new member of the family Microbacteriaceae isolated from a seawater reservoir of a solar saltern
    • Jang, G. I., Cho, Y. & Cho, B. C. (2013). Pontimonas salivibrio gen. nov., sp. nov., a new member of the family Microbacteriaceae isolated from a seawater reservoir of a solar saltern. Int J Syst Evol Microbiol 63, 2124-2131.
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 2124-2131
    • Jang, G.I.1    Cho, Y.2    Cho, B.C.3
  • 15
    • 25144446363 scopus 로고    scopus 로고
    • jPHYDIT: A JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences
    • Jeon, Y. S., Chung, H., Park, S., Hur, I., Lee, J. H. & Chun, J. (2005). jPHYDIT: a JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences. Bioinformatics 21, 3171-3173.
    • (2005) Bioinformatics , vol.21 , pp. 3171-3173
    • Jeon, Y.S.1    Chung, H.2    Park, S.3    Hur, I.4    Lee, J.H.5    Chun, J.6
  • 16
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , vol.3 , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 17
    • 33847292286 scopus 로고    scopus 로고
    • Oceanobacillus profundus sp. nov., isolated from a deep-sea sediment core
    • Kim, Y. G., Choi, D. H., Hyun, S. & Cho, B. C. (2007). Oceanobacillus profundus sp. nov., isolated from a deep-sea sediment core. Int J Syst Evol Microbiol 57, 409-413.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 409-413
    • Kim, Y.G.1    Choi, D.H.2    Hyun, S.3    Cho, B.C.4
  • 18
    • 53749085101 scopus 로고    scopus 로고
    • Nocardioides salarius sp. nov., isolated from seawater enriched with zooplankton
    • Kim, H. M., Choi, D. H., Hwang, C. Y. & Cho, B. C. (2008). Nocardioides salarius sp. nov., isolated from seawater enriched with zooplankton. Int J Syst Evol Microbiol 58, 2056-2064.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2056-2064
    • Kim, H.M.1    Choi, D.H.2    Hwang, C.Y.3    Cho, B.C.4
  • 19
    • 84863230041 scopus 로고    scopus 로고
    • Introducing EzTaxon-e: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
    • Authors other
    • Kim, O. S., Cho, Y. J., Lee, K., Yoon, S. H., Kim, M., Na, H., Park, S. C., Jeon, Y. S., Lee, J. H. & other authors (2012). Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62, 716-721.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 716-721
    • Kim, O.S.1    Cho, Y.J.2    Lee, K.3    Yoon, S.H.4    Kim, M.5    Na, H.6    Park, S.C.7    Jeon, Y.S.8    Lee, J.H.9
  • 20
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-206.
    • (1987) Methods Microbiol , vol.19 , pp. 161-206
    • Komagata, K.1    Suzuki, K.2
  • 21
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
    • (1991) Nucleic Acid Techniques In Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 22
    • 0021828693 scopus 로고
    • Modified medium for the oxidation-fermentation test in the identification of marine bacteria
    • Lemos, M. L., Toranzo, A. E. & Barja, J. L. (1985). Modified medium for the oxidation-fermentation test in the identification of marine bacteria. Appl Environ Microbiol 49, 1541-1543.
    • (1985) Appl Environ Microbiol , vol.49 , pp. 1541-1543
    • Lemos, M.L.1    Toranzo, A.E.2    Barja, J.L.3
  • 23
    • 0000144963 scopus 로고
    • Composition of sea water
    • Lyman, J. & Fleming, R. H. (1940). Composition of sea water. J Mar Res 3, 134-146.
    • (1940) J Mar Res , vol.3 , pp. 134-146
    • Lyman, J.1    Fleming, R.H.2
  • 24
    • 85010439719 scopus 로고
    • A procedure for the isolation of deoxyribonucleic acid from microorganism
    • Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganism. J Mol Biol 3, 208-218.
    • (1961) J Mol Biol , vol.3 , pp. 208-218
    • Marmur, J.1
  • 25
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 27
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 79953108494 scopus 로고    scopus 로고
    • Controlling pH in shake flasks using polymer-based controlled-release discs with pre-determined release kinetics
    • Scheidle, M., Dittrich, B., Klinger, J., Ikeda, H., Klee, D. & Buchs, J. (2011). Controlling pH in shake flasks using polymer-based controlled-release discs with pre-determined release kinetics. BMC Biotechnol 11, 25.
    • (2011) BMC Biotechnol , vol.11 , pp. 25
    • Scheidle, M.1    Dittrich, B.2    Klinger, J.3    Ikeda, H.4    Klee, D.5    Buchs, J.6
  • 29
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods For General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 30
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 31
    • 0034802237 scopus 로고    scopus 로고
    • Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: Proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov
    • Suzuki, M., Nakagawa, Y., Harayama, S. & Yamamoto, S. (2001). Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov. Int J Syst Evol Microbiol 51, 1639-1652.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1639-1652
    • Suzuki, M.1    Nakagawa, Y.2    Harayama, S.3    Yamamoto, S.4
  • 32
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 33
    • 48549090921 scopus 로고    scopus 로고
    • Balneola alkaliphila sp. nov., a marine bacterium isolated from the Mediterranean Sea
    • Urios, L., Intertaglia, L., Lesongeur, F. & Lebaron, P. (2008). Balneola alkaliphila sp. nov., a marine bacterium isolated from the Mediterranean Sea. Int J Syst Evol Microbiol 58, 1288-1291.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1288-1291
    • Urios, L.1    Intertaglia, L.2    Lesongeur, F.3    Lebaron, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.