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Volumn 79, Issue 24, 2013, Pages 7684-7695

Diverse broad-host-range plasmids from freshwater carry few accessory genes

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC RESISTANCE; ANTIBIOTIC RESISTANCE GENES; BACTERIAL ADAPTATIONS; FRESHWATER HABITATS; FRESHWATER SOURCES; GAMMAPROTEOBACTERIA; MICROBIAL COMMUNITIES; WASTEWATER TREATMENT PLANTS;

EID: 84886671563     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02252-13     Document Type: Article
Times cited : (48)

References (85)
  • 1
    • 7044246773 scopus 로고    scopus 로고
    • Evolution and population genetics of bacterial plasmids
    • Funnell BE, Phillips GJ (ed). ASM Press, Washington, DC.
    • Thomas CM. 2004. Evolution and population genetics of bacterial plasmids p 509-528. In Funnell BE, Phillips GJ (ed), Plasmid biology. ASM Press, Washington, DC.
    • (2004) Plasmid biology , pp. 509-528
    • Thomas, C.M.1
  • 2
    • 0033384422 scopus 로고    scopus 로고
    • Retrotransfer or gene capture: a feature of conjugative plasmids, with ecological and evolutionary significance
    • Szpirer C, Top E, Couturier M, Mergeay M. 1999. Retrotransfer or gene capture: a feature of conjugative plasmids, with ecological and evolutionary significance. Microbiology 145:3321-3329.
    • (1999) Microbiology , vol.145 , pp. 3321-3329
    • Szpirer, C.1    Top, E.2    Couturier, M.3    Mergeay, M.4
  • 4
    • 0023506940 scopus 로고
    • Incompatibility group P plasmids: genet-ics, evolution, and use in genetic manipulation
    • Thomas CM, Smith CA. 1987. Incompatibility group P plasmids: genet-ics, evolution, and use in genetic manipulation. Annu. Rev. Microbiol. 41:77-101.
    • (1987) Annu. Rev. Microbiol. , vol.41 , pp. 77-101
    • Thomas, C.M.1    Smith, C.A.2
  • 6
    • 10444275724 scopus 로고    scopus 로고
    • Complete nucleotide sequence of the conjugative tetracycline resistance plasmid pFBAOT6, a member of a group of IncU plasmids with global ubiquity
    • Rhodes G, Parkhill J, Bird C, Ambrose K, Jones M, Huys G, Swings J, Pickup R. 2004. Complete nucleotide sequence of the conjugative tetracycline resistance plasmid pFBAOT6, a member of a group of IncU plasmids with global ubiquity. Appl. Environ. Microbiol. 70:7497-7510.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 7497-7510
    • Rhodes, G.1    Parkhill, J.2    Bird, C.3    Ambrose, K.4    Jones, M.5    Huys, G.6    Swings, J.7    Pickup, R.8
  • 7
    • 0035204202 scopus 로고    scopus 로고
    • Comparative biology of IncQ and IncQ-like plasmids
    • Rawlings D, Tietze E. 2001. Comparative biology of IncQ and IncQ-like plasmids. Microbiol. Mol. Biol. Rev. 65:481-496.
    • (2001) Microbiol. Mol. Biol. Rev. , vol.65 , pp. 481-496
    • Rawlings, D.1    Tietze, E.2
  • 9
    • 0002818346 scopus 로고
    • Broad host range conjugative and mobilizable plasmids in Gram-negative bacteria
    • Clewell DB (ed). Plenum Press, New York, NY.
    • Guiney DG. 1993. Broad host range conjugative and mobilizable plasmids in Gram-negative bacteria, p 75-104. In Clewell DB (ed), Bacterial conjugation. Plenum Press, New York, NY.
    • (1993) Bacterial conjugation , pp. 75-104
    • Guiney, D.G.1
  • 10
    • 0347992016 scopus 로고    scopus 로고
    • Amelioration of the cost of conjugative plasmid carriage in Escherichia coli K12
    • Dahlberg C, Chao L. 2003. Amelioration of the cost of conjugative plasmid carriage in Escherichia coli K12. Genetics 165:1641-1649.
    • (2003) Genetics , vol.165 , pp. 1641-1649
    • Dahlberg, C.1    Chao, L.2
  • 11
    • 33847231339 scopus 로고    scopus 로고
    • Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship
    • De Gelder L, Ponciano JM, Joyce P, Top EM. 2007. Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship. Microbiology 153:452-463.
    • (2007) Microbiology , vol.153 , pp. 452-463
    • De Gelder, L.1    Ponciano, J.M.2    Joyce, P.3    Top, E.M.4
  • 12
    • 0023445840 scopus 로고
    • Effects of segregation and selection on instability of plasmid pACYC184 in Escherichia coli B
    • Lenski R, Bouma J. 1987. Effects of segregation and selection on instability of plasmid pACYC184 in Escherichia coli B. J. Bacteriol. 169:5314-5316.
    • (1987) J. Bacteriol. , vol.169 , pp. 5314-5316
    • Lenski, R.1    Bouma, J.2
  • 13
    • 0022742816 scopus 로고
    • Transitory derepression and the maintenance of conjugative plasmids
    • Lundquist PD, Levin BR. 1986. Transitory derepression and the maintenance of conjugative plasmids. Genetics 113:483-497.
    • (1986) Genetics , vol.113 , pp. 483-497
    • Lundquist, P.D.1    Levin, B.R.2
  • 14
    • 0017652638 scopus 로고
    • The population biology of bacterial plasmids: a priori conditions for the existence of conjugationally transmitted factors
    • Stewart FM, Levin BR. 1977. The population biology of bacterial plasmids: a priori conditions for the existence of conjugationally transmitted factors. Genetics 87:209-228.
    • (1977) Genetics , vol.87 , pp. 209-228
    • Stewart, F.M.1    Levin, B.R.2
  • 15
    • 53849090616 scopus 로고    scopus 로고
    • Spatial structure and nutrients promote invasion of IncP-1 plasmids in bacterial populations
    • Fox RE, Zhong X, Krone SM, Top EM. 2008. Spatial structure and nutrients promote invasion of IncP-1 plasmids in bacterial populations. ISME J. 2:1024-1039.
    • (2008) ISME J. , vol.2 , pp. 1024-1039
    • Fox, R.E.1    Zhong, X.2    Krone, S.M.3    Top, E.M.4
  • 16
    • 33646526288 scopus 로고    scopus 로고
    • Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas sp. A1 that corresponds to the typical IncP-1β plasmid backbone without any accessory gene
    • Harada K, Aso Y, Hashimoto W, Mikami B, Murata K. 2006. Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas sp. A1 that corresponds to the typical IncP-1β plasmid backbone without any accessory gene. Plasmid 56:11-23.
    • (2006) Plasmid , vol.56 , pp. 11-23
    • Harada, K.1    Aso, Y.2    Hashimoto, W.3    Mikami, B.4    Murata, K.5
  • 17
    • 33846011830 scopus 로고    scopus 로고
    • Plasmid pBP136 from Bordetella pertussis represents an ancestral form of IncP-1β plasmids without accessory mobile elements
    • Kamachi K, Sota M, Tamai Y, Nagata N, Konda T, Inoue T, Top EM, Arakawa Y. 2006. Plasmid pBP136 from Bordetella pertussis represents an ancestral form of IncP-1β plasmids without accessory mobile elements. Microbiology 152:3477-3484.
    • (2006) Microbiology , vol.152 , pp. 3477-3484
    • Kamachi, K.1    Sota, M.2    Tamai, Y.3    Nagata, N.4    Konda, T.5    Inoue, T.6    Top, E.M.7    Arakawa, Y.8
  • 18
    • 79956120307 scopus 로고    scopus 로고
    • Molecular characterization of conjugative plasmids in pesticide tolerant and multi-resistant bacterial isolates from contaminated alluvial soil
    • Anjum R, Grohmann E, Malik A. 2011. Molecular characterization of conjugative plasmids in pesticide tolerant and multi-resistant bacterial isolates from contaminated alluvial soil. Chemosphere 84:175-181.
    • (2011) Chemosphere , vol.84 , pp. 175-181
    • Anjum, R.1    Grohmann, E.2    Malik, A.3
  • 20
    • 33646239812 scopus 로고    scopus 로고
    • Occurrence of antibiotics in wastewater treatment facilities in Wisconsin, USA
    • Karthikeyan K, Meyer M. 2006. Occurrence of antibiotics in wastewater treatment facilities in Wisconsin, USA. Sci. Total Environ. 361:196-207.
    • (2006) Sci. Total Environ. , vol.361 , pp. 196-207
    • Karthikeyan, K.1    Meyer, M.2
  • 21
    • 0034789817 scopus 로고    scopus 로고
    • Drugs in the environment: emission of drugs, diagnostic aids and disinfectants into wastewater by hospitals in relation to other sources-a review
    • Kümmerer K. 2001. Drugs in the environment: emission of drugs, diagnostic aids and disinfectants into wastewater by hospitals in relation to other sources-a review. Chemosphere 45:957-969.
    • (2001) Chemosphere , vol.45 , pp. 957-969
    • Kümmerer, K.1
  • 22
    • 0038601519 scopus 로고    scopus 로고
    • Significance of antibiotics in the environment
    • Kümmerer K. 2003. Significance of antibiotics in the environment. J. Antimicrob. Chemother. 52:5-7.
    • (2003) J. Antimicrob. Chemother. , vol.52 , pp. 5-7
    • Kümmerer, K.1
  • 23
    • 34250348135 scopus 로고    scopus 로고
    • Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool
    • Schlüter A, Szczepanowski R, Pühler A, Top EM. 2007. Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool. FEMS Microbiol. Rev. 31:449-477.
    • (2007) FEMS Microbiol. Rev. , vol.31 , pp. 449-477
    • Schlüter, A.1    Szczepanowski, R.2    Pühler, A.3    Top, E.M.4
  • 24
    • 69949162470 scopus 로고    scopus 로고
    • Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics
    • Szczepanowski R, Linke B, Krahn I, Gartemann KH, Gutzkow T, Eichler W, Pühler A, Schlüter A. 2009. Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics. Microbiology 155:2306-2319.
    • (2009) Microbiology , vol.155 , pp. 2306-2319
    • Szczepanowski, R.1    Linke, B.2    Krahn, I.3    Gartemann, K.H.4    Gutzkow, T.5    Eichler, W.6    Pühler, A.7    Schlüter, A.8
  • 25
    • 0036848536 scopus 로고    scopus 로고
    • The prevalence and diversity of mobile genetic elements in bacterial communities of different environmental habitats: insights gained from different methodological approaches
    • Smalla K, Sobecky PA. 2002. The prevalence and diversity of mobile genetic elements in bacterial communities of different environmental habitats: insights gained from different methodological approaches. FEMS Microbiol. Ecol. 42:165-175.
    • (2002) FEMS Microbiol. Ecol. , vol.42 , pp. 165-175
    • Smalla, K.1    Sobecky, P.A.2
  • 26
    • 0026554427 scopus 로고
    • Isolation and screening of plasmids from the epilithon which mobilize recombinant plasmid pD10
    • Hill K, Weightman A, Fry J. 1992. Isolation and screening of plasmids from the epilithon which mobilize recombinant plasmid pD10. Appl. Environ. Microbiol. 58:1292-1300.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1292-1300
    • Hill, K.1    Weightman, A.2    Fry, J.3
  • 28
    • 0344333449 scopus 로고    scopus 로고
    • Isolation, characterization, and transfer of cryptic gene-mobilizing plasmids in the wheat rhizosphere
    • van Elsas JD, Gardener BB, Wolters AC, Smit E. 1998. Isolation, characterization, and transfer of cryptic gene-mobilizing plasmids in the wheat rhizosphere. Appl. Environ. Microbiol. 64:880-889.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 880-889
    • van Elsas, J.D.1    Gardener, B.B.2    Wolters, A.C.3    Smit, E.4
  • 29
    • 84857934383 scopus 로고    scopus 로고
    • Roles of long and short replication initiation proteins in the fate of IncP-1 plasmids
    • Yano H, Deckert GE, Rogers LM, Top EM. 2012. Roles of long and short replication initiation proteins in the fate of IncP-1 plasmids. J. Bacteriol. 194:1533-1543.
    • (2012) J. Bacteriol. , vol.194 , pp. 1533-1543
    • Yano, H.1    Deckert, G.E.2    Rogers, L.M.3    Top, E.M.4
  • 30
    • 0035110751 scopus 로고    scopus 로고
    • Two atypical mobilization proteins are involved in plasmid CloDF13 relaxation
    • Nunez B, De La Cruz F. 2001. Two atypical mobilization proteins are involved in plasmid CloDF13 relaxation. Mol. Microbiol. 39:1088-1099.
    • (2001) Mol. Microbiol. , vol.39 , pp. 1088-1099
    • Nunez, B.1    De La Cruz, F.2
  • 31
    • 2442483942 scopus 로고    scopus 로고
    • Genetic evidence of a coupling role for the TraG protein family in bacterial conjugation
    • Cabezon E, Sastre J, de la Cruz F. 1997. Genetic evidence of a coupling role for the TraG protein family in bacterial conjugation. Mol. Gen. Genet. 254:400-406.
    • (1997) Mol. Gen. Genet. , vol.254 , pp. 400-406
    • Cabezon, E.1    Sastre, J.2    de la Cruz, F.3
  • 33
    • 0026766423 scopus 로고
    • Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms
    • Antoine R, Locht C. 1992. Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms. Mol. Microbiol. 6:1785-1799.
    • (1992) Mol. Microbiol. , vol.6 , pp. 1785-1799
    • Antoine, R.1    Locht, C.2
  • 34
    • 0028793123 scopus 로고
    • Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
    • Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, Roop RM, II, Peterson KM. 1995. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166:175-176.
    • (1995) Gene , vol.166 , pp. 175-176
    • Kovach, M.E.1    Elzer, P.H.2    Hill, D.S.3    Robertson, G.T.4    Farris, M.A.5    Roop I.I, R.M.6    Peterson, K.M.7
  • 37
    • 75549087004 scopus 로고    scopus 로고
    • Comparative genomics of pAKD4, the prototype IncP-1δ plasmid with a complete backbone
    • Sen D, Yano H, Suzuki H, Krol JE, Rogers L, Brown CJ, Top EM. 2010. Comparative genomics of pAKD4, the prototype IncP-1δ plasmid with a complete backbone. Plasmid 63:98-107.
    • (2010) Plasmid , vol.63 , pp. 98-107
    • Sen, D.1    Yano, H.2    Suzuki, H.3    Krol, J.E.4    Rogers, L.5    Brown, C.J.6    Top, E.M.7
  • 39
    • 54049108449 scopus 로고    scopus 로고
    • Multiple sequence alignment using ClustalW and ClustalX
    • Chapter 2:Unit 2.3. doi:10.1002/0471250953.bi0203s00
    • Thompson J, Gibson T, Higgins D. 2002. Multiple sequence alignment using ClustalW and ClustalX. Curr. Protoc. Bioinformatics Chapter 2:Unit 2.3. doi:10.1002/0471250953.bi0203s00.
    • (2002) Curr. Protoc. Bioinformatics
    • Thompson, J.1    Gibson, T.2    Higgins, D.3
  • 40
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • Rice P, Longden I, Bleasby A. 2000. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 16:276-277.
    • (2000) Trends Genet. , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 41
    • 0242487488 scopus 로고    scopus 로고
    • Performance-based selection of likelihood models for phylogeny estimation
    • Minin V, Abdo Z, Joyce P, Sullivan J. 2003. Performance-based selection of likelihood models for phylogeny estimation. Syst. Biol. 52:674-683.
    • (2003) Syst. Biol. , vol.52 , pp. 674-683
    • Minin, V.1    Abdo, Z.2    Joyce, P.3    Sullivan, J.4
  • 45
    • 84871838444 scopus 로고    scopus 로고
    • Inferring the evolutionary history of IncP-1 plasmids despite incongruence among backbone gene trees
    • Sen D, Brown CJ, Top EM, Sullivan J. 2013. Inferring the evolutionary history of IncP-1 plasmids despite incongruence among backbone gene trees. Mol. Biol. Evol. 30:154-166.
    • (2013) Mol. Biol. Evol. , vol.30 , pp. 154-166
    • Sen, D.1    Brown, C.J.2    Top, E.M.3    Sullivan, J.4
  • 46
    • 33748807462 scopus 로고    scopus 로고
    • Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype
    • Haines A, Akhtar P, Stephens E, Jones K, Thomas C, Perkins C, Williams J, Day M, Fry J. 2006. Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype. Microbiology 152:2689-2701.
    • (2006) Microbiology , vol.152 , pp. 2689-2701
    • Haines, A.1    Akhtar, P.2    Stephens, E.3    Jones, K.4    Thomas, C.5    Perkins, C.6    Williams, J.7    Day, M.8    Fry, J.9
  • 47
    • 84886704081 scopus 로고    scopus 로고
    • Host range diversification within the IncP-1 plasmid group
    • 3 September. [Epub ahead of print.] doi:10.1099/mic.0.068387-0.
    • Yano H, Rogers LM, Knox M, Heuer H, Smalla K, Brown CJ, Top EM. 3 September 2013. Host range diversification within the IncP-1 plasmid group. Microbiology. [Epub ahead of print.] doi:10.1099/mic.0.068387-0.
    • (2013) Microbiology
    • Yano, H.1    Rogers, L.M.2    Knox, M.3    Heuer, H.4    Smalla, K.5    Brown, C.J.6    Top, E.M.7
  • 48
    • 46949101915 scopus 로고    scopus 로고
    • Genomic and functional characterization of the modular broad-host-range RA3 plas-mid, the archetype of the IncU group
    • Kulinska A, Czeredys M, Hayes F, Jagura-Burdzy G. 2008. Genomic and functional characterization of the modular broad-host-range RA3 plas-mid, the archetype of the IncU group. Appl. Environ. Microbiol. 74:4119-4132.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 4119-4132
    • Kulinska, A.1    Czeredys, M.2    Hayes, F.3    Jagura-Burdzy, G.4
  • 49
    • 84879186232 scopus 로고    scopus 로고
    • Global transcriptional regulator KorC coordinates expression of three backbone modules of the broad-host-range RA3 plasmid from IncU incompatibility group
    • Ludwiczak M, Dolowy P, Markowska A, Szarlak J, Kulinska A, Jagura-Burdzy G. 2013. Global transcriptional regulator KorC coordinates expression of three backbone modules of the broad-host-range RA3 plasmid from IncU incompatibility group. Plasmid 70:131-145.
    • (2013) Plasmid , vol.70 , pp. 131-145
    • Ludwiczak, M.1    Dolowy, P.2    Markowska, A.3    Szarlak, J.4    Kulinska, A.5    Jagura-Burdzy, G.6
  • 50
    • 50949131890 scopus 로고    scopus 로고
    • Complete Sequence of p07-406, a 24,179-base-pair plasmid harboring the blaVIM-7 metallo-β-lactamase gene in a Pseudomonas aeruginosa isolate from the United States
    • Li H, Toleman MA, Bennett PM, Jones RN, Walsh TR. 2008. Complete Sequence of p07-406, a 24,179-base-pair plasmid harboring the blaVIM-7 metallo-β-lactamase gene in a Pseudomonas aeruginosa isolate from the United States. Antimicrob. Agents Chemother. 52:3099-3105.
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 3099-3105
    • Li, H.1    Toleman, M.A.2    Bennett, P.M.3    Jones, R.N.4    Walsh, T.R.5
  • 51
    • 64349087867 scopus 로고    scopus 로고
    • The diversity of conjugative relaxases and its application in plasmid classification
    • Garcillan-Barcia M, Francia M, de la Cruz F. 2009. The diversity of conjugative relaxases and its application in plasmid classification. FEMS Microbiol. Rev. 33:657-687.
    • (2009) FEMS Microbiol. Rev. , vol.33 , pp. 657-687
    • Garcillan-Barcia, M.1    Francia, M.2    de la Cruz, F.3
  • 54
    • 0034956875 scopus 로고    scopus 로고
    • Genetic organization of plasmid pXF51 from the plant pathogen Xylella fastidiosa
    • Marques MV, da Silva AM, Gomes SL. 2001. Genetic organization of plasmid pXF51 from the plant pathogen Xylella fastidiosa. Plasmid 45: 184-199.
    • (2001) Plasmid , vol.45 , pp. 184-199
    • Marques, M.V.1    da Silva, A.M.2    Gomes, S.L.3
  • 57
    • 79953790350 scopus 로고    scopus 로고
    • The IncP-1 plasmid backbone adapts to different host bacterial species and evolves through homologous recombination
    • doi:10.1038/ncomms1267
    • Norberg P, Bergstrom M, Jethava V, Dubhashi D, Hermansson M. 2011. The IncP-1 plasmid backbone adapts to different host bacterial species and evolves through homologous recombination. Nat. Commun. 2:268. doi:10.1038/ncomms1267.
    • (2011) Nat. Commun. , vol.2 , pp. 268
    • Norberg, P.1    Bergstrom, M.2    Jethava, V.3    Dubhashi, D.4    Hermansson, M.5
  • 58
    • 0029876244 scopus 로고    scopus 로고
    • A new plasmidencoded proteic killer gene system: cloning, sequencing, and analyzing hig locus of plasmid Rts1
    • Tian Q, Ohnishi M, Tabuchi A, Terawaki Y. 1996. A new plasmidencoded proteic killer gene system: cloning, sequencing, and analyzing hig locus of plasmid Rts1. Biochem. Biophys. Res. Commun. 220:280-284.
    • (1996) Biochem. Biophys. Res. Commun. , vol.220 , pp. 280-284
    • Tian, Q.1    Ohnishi, M.2    Tabuchi, A.3    Terawaki, Y.4
  • 62
    • 0029020201 scopus 로고
    • Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementation
    • Top E, Holben W, Forney L. 1995. Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementation. Appl. Environ. Microbiol. 61:1691-1698.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1691-1698
    • Top, E.1    Holben, W.2    Forney, L.3
  • 63
    • 84866919992 scopus 로고    scopus 로고
    • Plasmids foster diversification and adaptation of bacterial populations in soil
    • Heuer H, Smalla K. 2012. Plasmids foster diversification and adaptation of bacterial populations in soil. FEMS Microbiol. Rev. 36:1083-1104.
    • (2012) FEMS Microbiol. Rev. , vol.36 , pp. 1083-1104
    • Heuer, H.1    Smalla, K.2
  • 64
    • 78650768252 scopus 로고    scopus 로고
    • Broad-host-range plasmids in treated wastewater effluent and receiving streams
    • Akiyama T, Asfahl K, Savin M. 2010. Broad-host-range plasmids in treated wastewater effluent and receiving streams. J. Environ. Qual. 39: 2211-2215.
    • (2010) J. Environ. Qual. , vol.39 , pp. 2211-2215
    • Akiyama, T.1    Asfahl, K.2    Savin, M.3
  • 65
    • 34248147506 scopus 로고    scopus 로고
    • Distribution and characteristics of plasmid mobilizers in aquatic and soil environments and activated sludge
    • Inoue D, Murashige K, Sei K, Soda S, Ike M, Fujita M. 2007. Distribution and characteristics of plasmid mobilizers in aquatic and soil environments and activated sludge. J. Gen. Appl. Microbiol. 53:67-70.
    • (2007) J. Gen. Appl. Microbiol. , vol.53 , pp. 67-70
    • Inoue, D.1    Murashige, K.2    Sei, K.3    Soda, S.4    Ike, M.5    Fujita, M.6
  • 66
    • 0033794814 scopus 로고    scopus 로고
    • Phenotypic and molecular characterization of conjugative antibiotic resistance plasmids isolated from bacterial communities of activated sludge
    • Dröge M, Pühler A, Selbitschka W. 2000. Phenotypic and molecular characterization of conjugative antibiotic resistance plasmids isolated from bacterial communities of activated sludge. Mol. Gen. Genet. 263: 471-482.
    • (2000) Mol. Gen. Genet. , vol.263 , pp. 471-482
    • Dröge, M.1    Pühler, A.2    Selbitschka, W.3
  • 67
    • 74649085158 scopus 로고    scopus 로고
    • Wastewater bacterial communities bring together broad-host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes
    • Moura A, Henriques I, Smalla K, Correia A. 2010. Wastewater bacterial communities bring together broad-host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes. Res. Microbiol. 161:58-66.
    • (2010) Res. Microbiol. , vol.161 , pp. 58-66
    • Moura, A.1    Henriques, I.2    Smalla, K.3    Correia, A.4
  • 68
    • 80051630584 scopus 로고    scopus 로고
    • Comparative genomics of multidrug resistance-encoding IncA/C plasmids from commensal and pathogenic Escherichia coli from multiple animal sources
    • doi:10.1371/journal.pone.0023415
    • Fernandez-Alarcon C, Singer R, Johnson T. 2011. Comparative genomics of multidrug resistance-encoding IncA/C plasmids from commensal and pathogenic Escherichia coli from multiple animal sources. PLoS One 6:e23415. doi:10.1371/journal.pone.0023415.
    • (2011) PLoS One , vol.6
    • Fernandez-Alarcon, C.1    Singer, R.2    Johnson, T.3
  • 69
    • 0020360486 scopus 로고
    • Distribution of bacterial plasmids in clean and polluted sites in a South Wales river
    • Burton NF, Day MJ, Bull AT. 1982. Distribution of bacterial plasmids in clean and polluted sites in a South Wales river. Appl. Environ. Microbiol. 44:1026-1029.
    • (1982) Appl. Environ. Microbiol. , vol.44 , pp. 1026-1029
    • Burton, N.F.1    Day, M.J.2    Bull, A.T.3
  • 70
    • 0000332280 scopus 로고
    • Plasmid frequency in natural populations of estuarine microorganisms
    • Glassman DL, McNicol LA. 1981. Plasmid frequency in natural populations of estuarine microorganisms. Plasmid 5:224-231.
    • (1981) Plasmid , vol.5 , pp. 224-231
    • Glassman, D.L.1    McNicol, L.A.2
  • 71
    • 0019435105 scopus 로고
    • Incidence of plasmids in marine Vibrio spp. isolated from an oil field in the northwestern Gulf of Mexico
    • Hada H, Sizemore R. 1981. Incidence of plasmids in marine Vibrio spp. isolated from an oil field in the northwestern Gulf of Mexico. Appl. Environ. Microbiol. 41:199-202.
    • (1981) Appl. Environ. Microbiol. , vol.41 , pp. 199-202
    • Hada, H.1    Sizemore, R.2
  • 72
    • 79951882096 scopus 로고    scopus 로고
    • Pyrosequencing of antibioticcontaminated river sediments reveals high levels of resistance and gene transfer elements
    • doi:10.1371/journal.pone.0017038
    • Kristiansson E, Fick J, Janzon A, Grabic R, Rutgersson C, Weijdegard B, Soderstrom H, Larsson DG. 2011. Pyrosequencing of antibioticcontaminated river sediments reveals high levels of resistance and gene transfer elements. PLoS One 6:e17038. doi:10.1371/journal.pone.0017038.
    • (2011) PLoS One , vol.6
    • Kristiansson, E.1    Fick, J.2    Janzon, A.3    Grabic, R.4    Rutgersson, C.5    Weijdegard, B.6    Soderstrom, H.7    Larsson, D.G.8
  • 74
    • 84861654731 scopus 로고    scopus 로고
    • Metamobilomics-expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing
    • Li LL, Norman A, Hansen LH, Sorensen SJ. 2012. Metamobilomics-expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing. Clin. Microbiol. Infect. 18(Suppl 4):5-7.
    • (2012) Clin. Microbiol. Infect. , vol.18 , Issue.SUPPL. 4 , pp. 5-7
    • Li, L.L.1    Norman, A.2    Hansen, L.H.3    Sorensen, S.J.4
  • 75
    • 77049127826 scopus 로고    scopus 로고
    • Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome
    • doi:10.1186/1471-2164-11-46
    • Jones B, Sun F, Marchesi J. 2010. Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome. BMC Genomics 11:46. doi:10.1186/1471-2164-11-46.
    • (2010) BMC Genomics , vol.11 , pp. 46
    • Jones, B.1    Sun, F.2    Marchesi, J.3
  • 77
    • 0032438888 scopus 로고    scopus 로고
    • Effect of mercury addition on plasmid incidence and gene mobilizing capacity in bulk soil
    • Drønen AK, Torsvik V, Goksøyr J, Top EM. 1998. Effect of mercury addition on plasmid incidence and gene mobilizing capacity in bulk soil. FEMS Microbiol. Ecol. 27:381-394.
    • (1998) FEMS Microbiol. Ecol. , vol.27 , pp. 381-394
    • Drønen, A.K.1    Torsvik, V.2    Goksøyr, J.3    Top, E.M.4
  • 78
    • 0028273843 scopus 로고
    • Plasmids isolated from the sugar beet phyllosphere show little or no homology to molecular probes currently available for plasmid typing
    • Kobayashi N, Bailey MJ. 1994. Plasmids isolated from the sugar beet phyllosphere show little or no homology to molecular probes currently available for plasmid typing. Microbiology 140:289-296.
    • (1994) Microbiology , vol.140 , pp. 289-296
    • Kobayashi, N.1    Bailey, M.J.2
  • 79
    • 0035954733 scopus 로고    scopus 로고
    • Natural conjugative plasmids induce bacterial biofilm development
    • Ghigo J. 2001. Natural conjugative plasmids induce bacterial biofilm development. Nature 412:442-445.
    • (2001) Nature , vol.412 , pp. 442-445
    • Ghigo, J.1
  • 80
    • 0027140429 scopus 로고
    • Bacterial extracellular zinc-containing metalloproteases
    • Hase C, Finkelstein R. 1993. Bacterial extracellular zinc-containing metalloproteases. Microbiol. Rev. 57:823-837.
    • (1993) Microbiol. Rev. , vol.57 , pp. 823-837
    • Hase, C.1    Finkelstein, R.2
  • 81
    • 78049418891 scopus 로고    scopus 로고
    • Predicting plasmid promiscuity based on genomic signature
    • Suzuki H, Yano H, Brown C, Top E. 2010. Predicting plasmid promiscuity based on genomic signature. J. Bacteriol. 192:6045-6055.
    • (2010) J. Bacteriol. , vol.192 , pp. 6045-6055
    • Suzuki, H.1    Yano, H.2    Brown, C.3    Top, E.4
  • 82
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yanisch-Perron C, Vieira J, Messing J. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 83
    • 34250668016 scopus 로고    scopus 로고
    • Mini-Tn7 insertion in bacteria with secondary, non-glmS-linked attTn7 sites: example Proteus mirabilis HI4320
    • Choi KH, Schweizer HP. 2006. Mini-Tn7 insertion in bacteria with secondary, non-glmS-linked attTn7 sites: example Proteus mirabilis HI4320. Nat. Protoc. 1:170-178.
    • (2006) Nat. Protoc. , vol.1 , pp. 170-178
    • Choi, K.H.1    Schweizer, H.P.2


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