-
2
-
-
0018643194
-
Mitochondrial DNA clones and matriarchal phylogeny within and among geographic populations of the pocket gopher, Geomys pinetis
-
Avise, J. C., C. Giblin-Davidson, J. Laerm, J. C. Patton, and R. A. Lansman 1979. Mitochondrial DNA clones and matriarchal phylogeny within and among geographic populations of the pocket gopher, Geomys pinetis. Proc. Natl Acad. Sci. USA 76:6694-6698.
-
(1979)
Proc. Natl Acad. Sci. USA
, vol.76
, pp. 6694-6698
-
-
Avise, J.C.1
Giblin-Davidson, C.2
Laerm, J.3
Patton, J.C.4
Lansman, R.A.5
-
3
-
-
41149147684
-
Phylogeography across a continent: the evolutionary and demographic history of the North American racer (Serpentes: Colubridae: Coluber constrictor)
-
Burbrink, F. T., F. Fontanella, A. R. Pyron, T. J. Guiher, and C. Jimenez 2008. Phylogeography across a continent: the evolutionary and demographic history of the North American racer (Serpentes: Colubridae: Coluber constrictor). Mol. Phylogenet. Evol. 47:274-288.
-
(2008)
Mol. Phylogenet. Evol.
, vol.47
, pp. 274-288
-
-
Burbrink, F.T.1
Fontanella, F.2
Pyron, A.R.3
Guiher, T.J.4
Jimenez, C.5
-
4
-
-
67650070756
-
A phylogenetic assessment of pocket gophers (Geomys): evidence from nuclear and mitochondrial genes
-
Chambers, R. R., P. D. Sudman, and R. D. Bradley 2009. A phylogenetic assessment of pocket gophers (Geomys): evidence from nuclear and mitochondrial genes. J. Mammal. 90:537-547.
-
(2009)
J. Mammal.
, vol.90
, pp. 537-547
-
-
Chambers, R.R.1
Sudman, P.D.2
Bradley, R.D.3
-
5
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond, A. J., and A. Rambaut 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7:214.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
6
-
-
73949141293
-
Species distribution models: ecological explanation and prediction across space and time
-
Elith, J., and J. R. Leathwick 2009. Species distribution models: ecological explanation and prediction across space and time. Annu. Rev. Ecol. Evol. Syst. 40:677-697.
-
(2009)
Annu. Rev. Ecol. Evol. Syst.
, vol.40
, pp. 677-697
-
-
Elith, J.1
Leathwick, J.R.2
-
7
-
-
78649991963
-
A statistical explanation of MaxEnt for ecologists
-
Elith, J., S. J. Phillips, T. Hastie, M. Dudík, Y. E. Chee, and C. J. Yates 2011. A statistical explanation of MaxEnt for ecologists. Divers. Distrib. 17:43-57.
-
(2011)
Divers. Distrib.
, vol.17
, pp. 43-57
-
-
Elith, J.1
Phillips, S.J.2
Hastie, T.3
Dudík, M.4
Chee, Y.E.5
Yates, C.J.6
-
8
-
-
40849097925
-
Phylogeography of Diadophis punctatus: extensive lineage diversity and repeated patterns of historical demography in a trans-continental snake
-
Fontanella, F. M., C. R. Feldman, M. E. Siddall, and F. T. Burbrink 2008. Phylogeography of Diadophis punctatus: extensive lineage diversity and repeated patterns of historical demography in a trans-continental snake. Mol. Phylogenet. Evol. 46:1049-1070.
-
(2008)
Mol. Phylogenet. Evol.
, vol.46
, pp. 1049-1070
-
-
Fontanella, F.M.1
Feldman, C.R.2
Siddall, M.E.3
Burbrink, F.T.4
-
9
-
-
79952053856
-
Testing ecological explanations for biogeographic boundaries
-
Glor, R. E., and D. Warren 2011. Testing ecological explanations for biogeographic boundaries. Evolution 65:673-683.
-
(2011)
Evolution
, vol.65
, pp. 673-683
-
-
Glor, R.E.1
Warren, D.2
-
10
-
-
80052849534
-
Population distribution models: species distributions are better modeled using biologically relevant data partitions
-
Gonzalez, S. C., J. A. Soto-Centeno, and D. L. Reed 2011. Population distribution models: species distributions are better modeled using biologically relevant data partitions. BMC Ecol. 11:20.
-
(2011)
BMC Ecol.
, vol.11
, pp. 20
-
-
Gonzalez, S.C.1
Soto-Centeno, J.A.2
Reed, D.L.3
-
11
-
-
4344644543
-
Integrating phylogenetics and environmental niche models to explore speciation mechanisms in dendrobatid frogs
-
Graham, C. H., S. R. Ron, J. C. Santos, C. J. Schneider, and C. Moritz 2004. Integrating phylogenetics and environmental niche models to explore speciation mechanisms in dendrobatid frogs. Evolution 58:1781-1793.
-
(2004)
Evolution
, vol.58
, pp. 1781-1793
-
-
Graham, C.H.1
Ron, S.R.2
Santos, J.C.3
Schneider, C.J.4
Moritz, C.5
-
13
-
-
29544443445
-
Very high resolution interpolated climate surfaces for global land areas
-
Hijmans, R. J., S. E. Cameron, J. L. Parra, P. G. Jones, and A. Jarvis 2005. Very high resolution interpolated climate surfaces for global land areas. Int. J. Climatol. 25:1965-1978.
-
(2005)
Int. J. Climatol.
, vol.25
, pp. 1965-1978
-
-
Hijmans, R.J.1
Cameron, S.E.2
Parra, J.L.3
Jones, P.G.4
Jarvis, A.5
-
14
-
-
0025764044
-
Evolution of the cytochrome b gene of mammals
-
Irwin, D. M., T. D. Kocher, and A. C. Wilson 1991. Evolution of the cytochrome b gene of mammals. J. Mol. Evol. 32:128-144.
-
(1991)
J. Mol. Evol.
, vol.32
, pp. 128-144
-
-
Irwin, D.M.1
Kocher, T.D.2
Wilson, A.C.3
-
15
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
16
-
-
38949161848
-
AUC: a misleading measure of the performance of predictive distribution models
-
Lobo, J. M., A. Jiménez-Valverde, and R. Real 2008. AUC: a misleading measure of the performance of predictive distribution models. Glob. Ecol. Biogeogr. 17:145-151.
-
(2008)
Glob. Ecol. Biogeogr.
, vol.17
, pp. 145-151
-
-
Lobo, J.M.1
Jiménez-Valverde, A.2
Real, R.3
-
17
-
-
0004103912
-
-
P. in University of Kansas Museum of Natural History Publications, University of Kansas Printing Service, Lawrence, KS.
-
Lynch, J. D., and W. E. Duellman 1997. P. 23 in Frogs of the genus Eleutherodactylus (Leptodactylidae) in western Ecuador: systematics, ecology and biogeography. University of Kansas Museum of Natural History Publications, University of Kansas Printing Service, Lawrence, KS.
-
(1997)
Frogs of the genus Eleutherodactylus (Leptodactylidae) in western Ecuador: systematics, ecology and biogeography
, pp. 23
-
-
Lynch, J.D.1
Duellman, W.E.2
-
18
-
-
77953127630
-
Phylogeographic analysis and environmental niche modeling of the plain-bellied watersnake (Nerodia erythrogaster) reveals low levels of genetic and ecological differentiation
-
Makowsky, R., J. C. Marshall, J. McVay, P. T. Chippindale, and L. J. Rissler 2010. Phylogeographic analysis and environmental niche modeling of the plain-bellied watersnake (Nerodia erythrogaster) reveals low levels of genetic and ecological differentiation. Mol. Phylogenet. Evol. 55:985-995.
-
(2010)
Mol. Phylogenet. Evol.
, vol.55
, pp. 985-995
-
-
Makowsky, R.1
Marshall, J.C.2
McVay, J.3
Chippindale, P.T.4
Rissler, L.J.5
-
19
-
-
0000900674
-
Ecological factors in speciation
-
Mayr, E. 1947. Ecological factors in speciation. Evolution 1:263-288.
-
(1947)
Evolution
, vol.1
, pp. 263-288
-
-
Mayr, E.1
-
20
-
-
0000656666
-
The metabolism of fossorial rodents: a study of convergence
-
McNab, B. K. 1966. The metabolism of fossorial rodents: a study of convergence. Ecology 47:712-733.
-
(1966)
Ecology
, vol.47
, pp. 712-733
-
-
McNab, B.K.1
-
22
-
-
79955013100
-
Ecological niche conservatism: a time-structured review of evidence
-
Peterson, A. T. 2011. Ecological niche conservatism: a time-structured review of evidence. J. Biogeogr. 38:817-827.
-
(2011)
J. Biogeogr.
, vol.38
, pp. 817-827
-
-
Peterson, A.T.1
-
23
-
-
0033588039
-
Conservatism of ecological niches in evolutionary time
-
Peterson, A. T., J. Soberón, and V. Sánchez-Cordero 1999. Conservatism of ecological niches in evolutionary time. Science 285:1265-1267.
-
(1999)
Science
, vol.285
, pp. 1265-1267
-
-
Peterson, A.T.1
Soberón, J.2
Sánchez-Cordero, V.3
-
24
-
-
41449100102
-
Modeling of species distributions with MaxEnt: new extensions and a comprehensive evaluation
-
Phillips, S. J., and M. Dudík 2007. Modeling of species distributions with MaxEnt: new extensions and a comprehensive evaluation. Ecography 31:161-175.
-
(2007)
Ecography
, vol.31
, pp. 161-175
-
-
Phillips, S.J.1
Dudík, M.2
-
25
-
-
27944446350
-
Maximum entropy modeling of species geographic distributions
-
Phillips, S., R. Anderson, and R. Schapire 2006. Maximum entropy modeling of species geographic distributions. Ecol. Model. 190:231-259.
-
(2006)
Ecol. Model.
, vol.190
, pp. 231-259
-
-
Phillips, S.1
Anderson, R.2
Schapire, R.3
-
26
-
-
68349160777
-
Lineage diversification in a widespread species: roles for niche divergence and conservatism in the common kingsnake, Lampropeltis getula
-
Pyron, A. R., and F. T. Burbrink 2009. Lineage diversification in a widespread species: roles for niche divergence and conservatism in the common kingsnake, Lampropeltis getula. Mol. Ecol. 18:3443-3457.
-
(2009)
Mol. Ecol.
, vol.18
, pp. 3443-3457
-
-
Pyron, A.R.1
Burbrink, F.T.2
-
27
-
-
84886274752
-
-
Tracer v1.5. Available at
-
Rambaut, A., and A. J. Drummond 2009. Tracer v1.5. Available at http://beast.bio.ed.ac.uk/Tracer.
-
(2009)
-
-
Rambaut, A.1
Drummond, A.J.2
-
28
-
-
0002439475
-
The sedimentary platform of Florida: Mesozoic to Cenozoic
-
A. F. Randazzo and D. S. Jones, eds. Univ. Press of Florida, Gainesville, FL.
-
Randazzo, A. F. 1997. The sedimentary platform of Florida: Mesozoic to Cenozoic. Pp. 39-56 in A. F. Randazzo and D. S. Jones, eds. The geology of Florida. Univ. Press of Florida, Gainesville, FL.
-
(1997)
The geology of Florida
, pp. 39-56
-
-
Randazzo, A.F.1
-
29
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F., and J. P. Huelsenbeck 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
30
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen, S., and H. Skaletsky 1999. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
-
(1999)
Methods Mol. Biol.
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
31
-
-
0000499895
-
Evolution and classification of the pocket gophers of the subfamily Geomyinae
-
Russell, R. J. 1968. Evolution and classification of the pocket gophers of the subfamily Geomyinae. Univ. Kans. Mus. Nat. Hist. Publ. 16:473-579.
-
(1968)
Univ. Kans. Mus. Nat. Hist. Publ.
, vol.16
, pp. 473-579
-
-
Russell, R.J.1
-
32
-
-
0037314098
-
r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock
-
Sanderson, M. J. 2003. r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock. Bioinformatics 19:301-302.
-
(2003)
Bioinformatics
, vol.19
, pp. 301-302
-
-
Sanderson, M.J.1
-
33
-
-
79951899359
-
Guidelines of the American Society of Mammalogists for the use of wild mammals in research
-
the Animal Care and Use Committee of the American Society of Mammalogists.
-
Sikes, R. L., W. L. Gannon; and the Animal Care and Use Committee of the American Society of Mammalogists. 2011. Guidelines of the American Society of Mammalogists for the use of wild mammals in research. J. Mammal. 92:235-253.
-
(2011)
J. Mammal
, vol.92
, pp. 235-253
-
-
Sikes, R.L.1
Gannon, W.L.2
-
34
-
-
0027138033
-
The diversification of South American murid rodents: evidence from mitochondrial DNA sequence data for the akodontine tribe
-
Smith, M. F., and J. L. Patton 1993. The diversification of South American murid rodents: evidence from mitochondrial DNA sequence data for the akodontine tribe. Biol. J. Linn. Soc. 50:149-177.
-
(1993)
Biol. J. Linn. Soc.
, vol.50
, pp. 149-177
-
-
Smith, M.F.1
Patton, J.L.2
-
35
-
-
75149129710
-
The biology of speciation
-
Sobel, J. M., G. F. Chen, L. R. Watt, and D. W. Schemske 2010. The biology of speciation. Evolution 64:295-315.
-
(2010)
Evolution
, vol.64
, pp. 295-315
-
-
Sobel, J.M.1
Chen, G.F.2
Watt, L.R.3
Schemske, D.W.4
-
36
-
-
33750996184
-
Comparative phylogeography of unglaciated eastern North America
-
Soltis, D. E., A. B. Morris, J. S. McLachlan, P. S. Manos, and P. S. Soltis 2006. Comparative phylogeography of unglaciated eastern North America. Mol. Ecol. 15:4261-4293.
-
(2006)
Mol. Ecol.
, vol.15
, pp. 4261-4293
-
-
Soltis, D.E.1
Morris, A.B.2
McLachlan, J.S.3
Manos, P.S.4
Soltis, P.S.5
-
37
-
-
10344244570
-
DNA data support a rapid radiation of pocket gopher genera (Rodentia: Geomyidae)
-
Spradling, T. A., S. V. Brant, M. S. Hafner, and C. J. Dickerson 2004. DNA data support a rapid radiation of pocket gopher genera (Rodentia: Geomyidae). J. Mamm. Evol. 11:105-125.
-
(2004)
J. Mamm. Evol.
, vol.11
, pp. 105-125
-
-
Spradling, T.A.1
Brant, S.V.2
Hafner, M.S.3
Dickerson, C.J.4
-
39
-
-
33748459895
-
Molecular systematics of pocket gophers of the genus Geomys
-
Sudman, P. D., J. K. Wickliffe, P. Horner, and M. J. Smolen 2006. Molecular systematics of pocket gophers of the genus Geomys. J. Mammal. 87:668-676.
-
(2006)
J. Mammal.
, vol.87
, pp. 668-676
-
-
Sudman, P.D.1
Wickliffe, J.K.2
Horner, P.3
Smolen, M.J.4
-
40
-
-
0023890867
-
Measuring the accuracy of diagnostic systems
-
Swets, J. A. 1988. Measuring the accuracy of diagnostic systems. Science 240:1285-1293.
-
(1988)
Science
, vol.240
, pp. 1285-1293
-
-
Swets, J.A.1
-
41
-
-
84886276058
-
-
PAUP*: phylogenetic analysis using parsimony (*and other methods).
-
Swofford, D. L. 2003. PAUP*: phylogenetic analysis using parsimony (*and other methods).
-
(2003)
-
-
Swofford, D.L.1
-
42
-
-
54849427082
-
Environmental niche equivalency versus conservatism: quantitative approaches to niche evolution
-
Warren, D. L., R. E. Glor, and M. Turelli 2008. Environmental niche equivalency versus conservatism: quantitative approaches to niche evolution. Evolution 62:2868-2883.
-
(2008)
Evolution
, vol.62
, pp. 2868-2883
-
-
Warren, D.L.1
Glor, R.E.2
Turelli, M.3
-
43
-
-
77955243011
-
ENMTools: a toolbox for comparative studies of environmental niche models
-
Warren, D. L., R. E. Glor, and M. Turelli 2010. ENMTools: a toolbox for comparative studies of environmental niche models. Ecography 1:607-611.
-
(2010)
Ecography
, vol.1
, pp. 607-611
-
-
Warren, D.L.1
Glor, R.E.2
Turelli, M.3
-
44
-
-
30344446365
-
Niche conservatism: integrating evolution, ecology, and conservation biology
-
Wiens, J. J., and C. H. Graham 2005. Niche conservatism: integrating evolution, ecology, and conservation biology. Annu. Rev. Ecol. Evol. Syst. 36:519-539.
-
(2005)
Annu. Rev. Ecol. Evol. Syst.
, vol.36
, pp. 519-539
-
-
Wiens, J.J.1
Graham, C.H.2
|