-
1
-
-
34548605471
-
Understanding the diversity of foliar endophytic fungi: progress, challenges, and frontiers
-
Arnold AE (2007) Understanding the diversity of foliar endophytic fungi: progress, challenges, and frontiers. Fungal Biol Rev 21: 51-66.
-
(2007)
Fungal Biol Rev
, vol.21
, pp. 51-66
-
-
Arnold, A.E.1
-
2
-
-
84855937877
-
Active and total microbial communities in forest soil are largely different and highly stratified during decomposition
-
Baldrian P, Kolařík M, Stursová M, Kopecký J, Valášková V, Větrovský T, Zifčáková L, Snajdr J, Rídl J, Vlček C, Voříšková J (2012) Active and total microbial communities in forest soil are largely different and highly stratified during decomposition. ISME J 6: 248-258.
-
(2012)
ISME J
, vol.6
, pp. 248-258
-
-
Baldrian, P.1
Kolařík, M.2
Stursová, M.3
Kopecký, J.4
Valášková, V.5
Větrovský, T.6
Zifčáková, L.7
Snajdr, J.8
Rídl, J.9
Vlček, C.10
Voříšková, J.11
-
3
-
-
80052726244
-
Soil microbial community successional patterns during forest ecosystem restoration
-
Banning NC, Gleeson DB, Grigg AH, Grant CD, Andersen GL, Brodie EL, Murphy DV (2011) Soil microbial community successional patterns during forest ecosystem restoration. Appl Environ Microbiol 77: 6158-6164.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 6158-6164
-
-
Banning, N.C.1
Gleeson, D.B.2
Grigg, A.H.3
Grant, C.D.4
Andersen, G.L.5
Brodie, E.L.6
Murphy, D.V.7
-
4
-
-
0032006037
-
The Solling roof project - site characteristics, experiments and results
-
Bredemeier M, Blanck K, Dohrenbusch A, Lamersdorf N, Meyer AC, Murach D, Parth A, Xu YJ (1998) The Solling roof project - site characteristics, experiments and results. Forest Ecol Manag 101: 281-293.
-
(1998)
Forest Ecol Manag
, vol.101
, pp. 281-293
-
-
Bredemeier, M.1
Blanck, K.2
Dohrenbusch, A.3
Lamersdorf, N.4
Meyer, A.C.5
Murach, D.6
Parth, A.7
Xu, Y.J.8
-
5
-
-
70349482733
-
454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity
-
Buée M, Reich M, Murat C, Morin E, Nilsson RH, Uroz S, Martin F (2009) 454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity. New Phytol 184: 449-456.
-
(2009)
New Phytol
, vol.184
, pp. 449-456
-
-
Buée, M.1
Reich, M.2
Murat, C.3
Morin, E.4
Nilsson, R.H.5
Uroz, S.6
Martin, F.7
-
8
-
-
84864101999
-
Spatial variability of phyllosphere fungal assemblages: genetic distance predominates over geographic distance in a European beech stand (Fagus sylvatica)
-
Cordier T, Robin C, Capdevielle X, Desprez-Loustau M, Vacher C (2012) Spatial variability of phyllosphere fungal assemblages: genetic distance predominates over geographic distance in a European beech stand (Fagus sylvatica). Fungal Ecol 5: 509-520.
-
(2012)
Fungal Ecol
, vol.5
, pp. 509-520
-
-
Cordier, T.1
Robin, C.2
Capdevielle, X.3
Desprez-Loustau, M.4
Vacher, C.5
-
9
-
-
18244386726
-
An interlaboratory comparison of ITS2-PCR for the identification of yeasts, using the ABI Prism 310 and CEQ8000 capillary electrophoresis systems
-
de Baere T, van Keerberghen A, van Hauwe P, de Beenhouwer H, Boel A, Verschraegen G, Claeys G, Vaneechoutte M (2005) An interlaboratory comparison of ITS2-PCR for the identification of yeasts, using the ABI Prism 310 and CEQ8000 capillary electrophoresis systems. BMC Microbiol 5: 14.
-
(2005)
BMC Microbiol
, vol.5
, pp. 14
-
-
de Baere, T.1
van Keerberghen, A.2
van Hauwe, P.3
de Beenhouwer, H.4
Boel, A.5
Verschraegen, G.6
Claeys, G.7
Vaneechoutte, M.8
-
10
-
-
79954752208
-
Distinct seasonal assemblages of arbuscular mycorrhizal fungi revealed by massively parallel pyrosequencing
-
Dumbrell AJ, Ashton PD, Aziz N, Feng G, Nelson M, Dytham C, Fitter AH, Helgason T (2011) Distinct seasonal assemblages of arbuscular mycorrhizal fungi revealed by massively parallel pyrosequencing. New Phytol 190: 794-804.
-
(2011)
New Phytol
, vol.190
, pp. 794-804
-
-
Dumbrell, A.J.1
Ashton, P.D.2
Aziz, N.3
Feng, G.4
Nelson, M.5
Dytham, C.6
Fitter, A.H.7
Helgason, T.8
-
11
-
-
79961228770
-
The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi
-
Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, Aerts A, Asiegbu FO, Baker SE, Barry K, Bendiksby M, Blumentritt M, Coutinho PM, Cullen D, de Vries RP, Gathman A, Goodell B, Henrissat B, Ihrmark K, Kauserud H, Kohler A, LaButti K, Lapidus A, Lavin JL, Lee Y, Lindquist E, Lilly W, Lucas S, Morin E, Murat C, Oguiza JA, Park J, Pisabarro AG, Riley R, Rosling A, Salamov A, Schmidt O, Schmutz J, Skrede I, Stenlid J, Wiebenga A, Xie X, Kues U, Hibbett DS, Hoffmeister D, Hogberg N, Martin F, Grigoriev IV, Watkinson SC (2011) The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science 333: 762-765.
-
(2011)
Science
, vol.333
, pp. 762-765
-
-
Eastwood, D.C.1
Floudas, D.2
Binder, M.3
Majcherczyk, A.4
Schneider, P.5
Aerts, A.6
Asiegbu, F.O.7
Baker, S.E.8
Barry, K.9
Bendiksby, M.10
Blumentritt, M.11
Coutinho, P.M.12
Cullen, D.13
de Vries, R.P.14
Gathman, A.15
Goodell, B.16
Henrissat, B.17
Ihrmark, K.18
Kauserud, H.19
Kohler, A.20
LaButti, K.21
Lapidus, A.22
Lavin, J.L.23
Lee, Y.24
Lindquist, E.25
Lilly, W.26
Lucas, S.27
Morin, E.28
Murat, C.29
Oguiza, J.A.30
Park, J.31
Pisabarro, A.G.32
Riley, R.33
Rosling, A.34
Salamov, A.35
Schmidt, O.36
Schmutz, J.37
Skrede, I.38
Stenlid, J.39
Wiebenga, A.40
Xie, X.41
Kues, U.42
Hibbett, D.S.43
Hoffmeister, D.44
Hogberg, N.45
Martin, F.46
Grigoriev, I.V.47
Watkinson, S.C.48
more..
-
12
-
-
80052865407
-
Bacterial symbionts as mediators of ecologically important traits of insect hosts
-
Feldhaar H (2011) Bacterial symbionts as mediators of ecologically important traits of insect hosts. Ecol Entomol 36: 533-543.
-
(2011)
Ecol Entomol
, vol.36
, pp. 533-543
-
-
Feldhaar, H.1
-
13
-
-
0032879764
-
Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities
-
Fisher MM, Triplett EW (1999) Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Appl Environ Microbiol 65: 4630-4636.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 4630-4636
-
-
Fisher, M.M.1
Triplett, E.W.2
-
14
-
-
33847003675
-
Biodiversity of soil-inhabiting fungi
-
Gams W (2007) Biodiversity of soil-inhabiting fungi. Biodivers Conserv 16: 69-72.
-
(2007)
Biodivers Conserv
, vol.16
, pp. 69-72
-
-
Gams, W.1
-
15
-
-
0027580147
-
ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts
-
Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Mol Ecol 2: 113-118.
-
(1993)
Mol Ecol
, vol.2
, pp. 113-118
-
-
Gardes, M.1
Bruns, T.D.2
-
16
-
-
31444441790
-
Genomics: discovery in the dirt
-
Gewin V (2006) Genomics: discovery in the dirt. Nature 439: 384-386.
-
(2006)
Nature
, vol.439
, pp. 384-386
-
-
Gewin, V.1
-
17
-
-
34248159046
-
GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes
-
He Z, Gentry TJ, Schadt CW, Wu L, Liebich J, Chong SC, Huang Z, Wu W, Gu B, Jardine P, Criddle C, Zhou J (2007) GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes. ISME J 1: 67-77.
-
(2007)
ISME J
, vol.1
, pp. 67-77
-
-
He, Z.1
Gentry, T.J.2
Schadt, C.W.3
Wu, L.4
Liebich, J.5
Chong, S.C.6
Huang, Z.7
Wu, W.8
Gu, B.9
Jardine, P.10
Criddle, C.11
Zhou, J.12
-
18
-
-
77951924594
-
Massively parallel 454-sequencing of fungal communities in Quercus spp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites
-
Jumpponen A, Jones KL, Mattox JD, Yaege C (2010) Massively parallel 454-sequencing of fungal communities in Quercus spp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites. Mol Ecol 19(Suppl 1): 41-53.
-
(2010)
Mol Ecol
, vol.19
, Issue.SUPPL. 1
, pp. 41-53
-
-
Jumpponen, A.1
Jones, K.L.2
Mattox, J.D.3
Yaege, C.4
-
19
-
-
33846184630
-
Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest
-
Lindahl BD, Ihrmark K, Boberg J, Trumbore SE, Högberg P, Stenlid J, Finlay RD (2007) Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest. New Phytol 173: 611-620.
-
(2007)
New Phytol
, vol.173
, pp. 611-620
-
-
Lindahl, B.D.1
Ihrmark, K.2
Boberg, J.3
Trumbore, S.E.4
Högberg, P.5
Stenlid, J.6
Finlay, R.D.7
-
20
-
-
70349555531
-
Molecular fingerprinting techniques to analyze soil microbial communities
-
2nd edn., J. D. Elsasvan, J. K. Janson, and J. T. Trevors (Eds.), Madison: CRC Press
-
Oros-Sichler M, Costa R, Heuer H, Small K (2007) Molecular fingerprinting techniques to analyze soil microbial communities. In: van Elsas JD, Janson JK, Trevors JT (eds) Modern soil microbiology, 2nd edn. CRC Press, Madison, pp 355-386.
-
(2007)
Modern Soil Microbiology
, pp. 355-386
-
-
Oros-Sichler, M.1
Costa, R.2
Heuer, H.3
Small, K.4
-
21
-
-
33749828295
-
Role of phyllosphere fungi of forest trees in the development of decomposer fungal communities and decomposition processes of leaf litter
-
Osono T (2006) Role of phyllosphere fungi of forest trees in the development of decomposer fungal communities and decomposition processes of leaf litter. Can J Microbiol 52: 701-716.
-
(2006)
Can J Microbiol
, vol.52
, pp. 701-716
-
-
Osono, T.1
-
22
-
-
48749114482
-
Towards a universally adaptable method for quantitative extraction of high-purity nucleic acids from soil
-
Peršoh D, Theuerl S, Buscot F, Rambold G (2008) Towards a universally adaptable method for quantitative extraction of high-purity nucleic acids from soil. J Microbiol Meth 75: 19-24.
-
(2008)
J Microbiol Meth
, vol.75
, pp. 19-24
-
-
Peršoh, D.1
Theuerl, S.2
Buscot, F.3
Rambold, G.4
-
23
-
-
77954177849
-
First fungal community analyses of endophytic ascomycetes associated with Viscum album ssp. austriacum and its host Pinus sylvestris
-
Peršoh D, Melcher M, Flessa F, Rambold G (2010) First fungal community analyses of endophytic ascomycetes associated with Viscum album ssp. austriacum and its host Pinus sylvestris. Fungal Biol 114: 585-596.
-
(2010)
Fungal Biol
, vol.114
, pp. 585-596
-
-
Peršoh, D.1
Melcher, M.2
Flessa, F.3
Rambold, G.4
-
24
-
-
84871478003
-
A transcriptome-targeting EcoChip for assessing functional mycodiversity
-
Peršoh D, Weig AR, Rambold G (2012) A transcriptome-targeting EcoChip for assessing functional mycodiversity. Microarrays 1: 25-41.
-
(2012)
Microarrays
, vol.1
, pp. 25-41
-
-
Peršoh, D.1
Weig, A.R.2
Rambold, G.3
-
25
-
-
84871490535
-
Fungal community composition shifts along a leaf degradation gradient in a European Beech forest
-
doi: 10. 1007/s11104-012-1271-y
-
Peršoh D, Segert J, Zigan A, Rambold G (2013) Fungal community composition shifts along a leaf degradation gradient in a European Beech forest. Plant Soil 362: 175-186. doi: 10. 1007/s11104-012-1271-y.
-
(2013)
Plant Soil
, vol.362
, pp. 175-186
-
-
Peršoh, D.1
Segert, J.2
Zigan, A.3
Rambold, G.4
-
26
-
-
67650104286
-
Limitations and benefits of ARISA intra-genomic diversity fingerprinting
-
Popa R, Popa R, Mashall MJ, Nguyen H, Tebo BM, Brauer S (2009) Limitations and benefits of ARISA intra-genomic diversity fingerprinting. J Microbiol Meth 78: 111-118.
-
(2009)
J Microbiol Meth
, vol.78
, pp. 111-118
-
-
Popa, R.1
Popa, R.2
Mashall, M.J.3
Nguyen, H.4
Tebo, B.M.5
Brauer, S.6
-
27
-
-
79960028475
-
Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: a strategy for mitigating impacts of climate change
-
Redman RS, Kim YO, Woodward CJDA, Greer C, Espino L, Doty SL, Rodriguez RJ (2011) Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: a strategy for mitigating impacts of climate change. PLoS One 6: e14823.
-
(2011)
PLoS One
, vol.6
-
-
Redman, R.S.1
Kim, Y.O.2
Woodward, C.J.D.A.3
Greer, C.4
Espino, L.5
Doty, S.L.6
Rodriguez, R.J.7
-
30
-
-
34548616090
-
Endophytic fungi in forest trees: are they mutualists?
-
Sieber T (2007) Endophytic fungi in forest trees: are they mutualists? Fungal Biol Rev 21: 75-89.
-
(2007)
Fungal Biol Rev
, vol.21
, pp. 75-89
-
-
Sieber, T.1
-
31
-
-
77951908579
-
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
-
Stoeck T, Bass D, Nebel M, Christen R, Jones MDM, Breiner H, Richards TA (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Mol Ecol 19(Suppl 1): 21-31.
-
(2010)
Mol Ecol
, vol.19
, Issue.SUPPL. 1
, pp. 21-31
-
-
Stoeck, T.1
Bass, D.2
Nebel, M.3
Christen, R.4
Jones, M.D.M.5
Breiner, H.6
Richards, T.A.7
-
32
-
-
84941661569
-
Endophytic fungi
-
G. M. Mueller, G. F. Bills, and M. S. Foster (Eds.), Amsterdam, Boston: Elsevier Academic Press
-
Stone J, Polishook J, White J Jr (2004) Endophytic fungi. In: Mueller GM, Bills GF, Foster MS (eds) Biodiversity of fungi. Inventory and monitoring methods. Elsevier Academic Press, Amsterdam, Boston, pp 241-270.
-
(2004)
Biodiversity of Fungi. Inventory and Monitoring Methods
, pp. 241-270
-
-
Stone, J.1
Polishook, J.2
White Jr., J.3
-
33
-
-
77956283658
-
454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases
-
Tedersoo L, Nilsson RH, Abarenkov K, Jairus T, Sadam A, Saar I, Bahram M, Bechem E, Chuyong G, Kõljalg U (2010) 454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases. New Phytol 188: 291-301.
-
(2010)
New Phytol
, vol.188
, pp. 291-301
-
-
Tedersoo, L.1
Nilsson, R.H.2
Abarenkov, K.3
Jairus, T.4
Sadam, A.5
Saar, I.6
Bahram, M.7
Bechem, E.8
Chuyong, G.9
Kõljalg, U.10
-
34
-
-
33846247144
-
A comparison of fungal communities from four salt marsh plants using automated ribosomal intergenic spacer analysis (ARISA)
-
Torzilli AP, Sikaroodi M, Chalkley D, Gillevet PM (2006) A comparison of fungal communities from four salt marsh plants using automated ribosomal intergenic spacer analysis (ARISA). Mycologia 98: 690-698.
-
(2006)
Mycologia
, vol.98
, pp. 690-698
-
-
Torzilli, A.P.1
Sikaroodi, M.2
Chalkley, D.3
Gillevet, P.M.4
-
35
-
-
67349124387
-
Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.) - different cultivation techniques influence fungal biodiversity assessment
-
Unterseher M, Schnittler M (2009) Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.) - different cultivation techniques influence fungal biodiversity assessment. Mycol Res 113: 645-654.
-
(2009)
Mycol Res
, vol.113
, pp. 645-654
-
-
Unterseher, M.1
Schnittler, M.2
-
36
-
-
84655169785
-
Basidiobolus haptosporus is frequently associated with the gamasid mite Leptogamasus obesus
-
Werner S, Peršoh D, Rambold, G (2012) Basidiobolus haptosporus is frequently associated with the gamasid mite Leptogamasus obesus. Fungal Biol 116: 90-97.
-
(2012)
Fungal Biol
, vol.116
, pp. 90-97
-
-
Werner, S.1
Peršoh, D.2
Rambold, G.3
-
37
-
-
0000432452
-
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
-
M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (Eds.), San Diego: Academic
-
White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, San Diego, pp 315-322.
-
(1990)
PCR Protocols: A Guide to Methods and Applications
, pp. 315-322
-
-
White, T.J.1
Bruns, T.2
Lee, S.3
Taylor, J.W.4
-
38
-
-
80053216437
-
Microbial responses to a changing environment: implications for the future functioning of terrestrial ecosystems
-
Zak DR, Pregitzer KS, Burton AJ, Edwards IP, Kellner H (2011) Microbial responses to a changing environment: implications for the future functioning of terrestrial ecosystems. Fungal Ecol 4: 386-395.
-
(2011)
Fungal Ecol
, vol.4
, pp. 386-395
-
-
Zak, D.R.1
Pregitzer, K.S.2
Burton, A.J.3
Edwards, I.P.4
Kellner, H.5
|