-
1
-
-
0344153433
-
Priority effects in coral reef fish communities
-
Almany G.R. Priority effects in coral reef fish communities. Ecology 2003, 84:1920-1935.
-
(2003)
Ecology
, vol.84
, pp. 1920-1935
-
-
Almany, G.R.1
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J.H., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 1997, 25:3389-3402.
-
(1997)
Nucleic Acids Research
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
78650161976
-
Quantifying microbial communities with 454 pyrosequencing: does read abundance count?
-
Amend A.S., Seifert K.A., Bruns T.D. Quantifying microbial communities with 454 pyrosequencing: does read abundance count?. Molecular Ecology 2010, 19:5555-5565.
-
(2010)
Molecular Ecology
, vol.19
, pp. 5555-5565
-
-
Amend, A.S.1
Seifert, K.A.2
Bruns, T.D.3
-
4
-
-
0002154022
-
A new method for non-parametric multivariate analysis of variance
-
Anderson M.J. A new method for non-parametric multivariate analysis of variance. Austral Ecology 2001, 26:32-46.
-
(2001)
Austral Ecology
, vol.26
, pp. 32-46
-
-
Anderson, M.J.1
-
5
-
-
78650061319
-
Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist
-
Anderson M.J., Crist T.O., Chase J.M., Vellend M., Inouye B.D., Freestone A.L., Sanders N.J., Cornell H.V., Comita L.S., Davies K.F., Harrison S.P., Kraft N.J.B., Stegen J.C., Swenson N.G. Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist. Ecology Letters 2011, 14:19-28.
-
(2011)
Ecology Letters
, vol.14
, pp. 19-28
-
-
Anderson, M.J.1
Crist, T.O.2
Chase, J.M.3
Vellend, M.4
Inouye, B.D.5
Freestone, A.L.6
Sanders, N.J.7
Cornell, H.V.8
Comita, L.S.9
Davies, K.F.10
Harrison, S.P.11
Kraft, N.J.B.12
Stegen, J.C.13
Swenson, N.G.14
-
6
-
-
0346103667
-
Fungal endophytes limit pathogen damage in a tropical tree
-
Arnold A.E., Mejia L.C., Kyllo D., Rojas E.I., Maynard Z., Robbins N., Herre E.A. Fungal endophytes limit pathogen damage in a tropical tree. Proceedings of the National Academy of Sciences of the United States of America 2003, 100:15649-15654.
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, pp. 15649-15654
-
-
Arnold, A.E.1
Mejia, L.C.2
Kyllo, D.3
Rojas, E.I.4
Maynard, Z.5
Robbins, N.6
Herre, E.A.7
-
7
-
-
29344463577
-
Beech leaf colonization by the endophyte Apiognomonia errabunda dramatically depends on light exposure and climatic conditions
-
Bahnweg G., Heller W., Stich S., Knappe C., Betz G., Heerdt C., Kehr R.D., Ernst D., Langebartels C., Nunn A.J., Rothenburger J., Schubert R., Wallis P., Muller-Starck G., Werner H., Matyssek R., Sandermann H. Beech leaf colonization by the endophyte Apiognomonia errabunda dramatically depends on light exposure and climatic conditions. Plant Biology 2005, 7:659-669.
-
(2005)
Plant Biology
, vol.7
, pp. 659-669
-
-
Bahnweg, G.1
Heller, W.2
Stich, S.3
Knappe, C.4
Betz, G.5
Heerdt, C.6
Kehr, R.D.7
Ernst, D.8
Langebartels, C.9
Nunn, A.J.10
Rothenburger, J.11
Schubert, R.12
Wallis, P.13
Muller-Starck, G.14
Werner, H.15
Matyssek, R.16
Sandermann, H.17
-
8
-
-
80054117496
-
Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets
-
Bengtsson J., Eriksson K., Hartmann M., Wang Z., Shenoy B., Grelet G.-A., Abarenkov K., Petri A., Alm Rosenblad M., Nilsson R. Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets. Antonie van Leeuwenhoek 2011, 100:471-475.
-
(2011)
Antonie van Leeuwenhoek
, vol.100
, pp. 471-475
-
-
Bengtsson, J.1
Eriksson, K.2
Hartmann, M.3
Wang, Z.4
Shenoy, B.5
Grelet, G.-A.6
Abarenkov, K.7
Petri, A.8
Alm Rosenblad, M.9
Nilsson, R.10
-
9
-
-
16644372881
-
Biodegradation of phenol and phenol-related compounds by psychrophilic and cold-tolerant alpine yeasts
-
Bergauer P., Fonteyne P.A., Nolard N., Schinner F., Margesin R. Biodegradation of phenol and phenol-related compounds by psychrophilic and cold-tolerant alpine yeasts. Chemosphere 2005, 59:909-918.
-
(2005)
Chemosphere
, vol.59
, pp. 909-918
-
-
Bergauer, P.1
Fonteyne, P.A.2
Nolard, N.3
Schinner, F.4
Margesin, R.5
-
10
-
-
34547834963
-
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing
-
Binladen J., Gilbert M.T., Bollback J.P., Panitz F., Bendixen C., Nielsen R., Willerslev E. The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS ONE 2007, 2:e197.
-
(2007)
PLoS ONE
, vol.2
-
-
Binladen, J.1
Gilbert, M.T.2
Bollback, J.P.3
Panitz, F.4
Bendixen, C.5
Nielsen, R.6
Willerslev, E.7
-
11
-
-
41849149636
-
Pathogens promote plant diversity through a compensatory response
-
Bradley D.J., Gilbert G.S., Martiny J.B.H. Pathogens promote plant diversity through a compensatory response. Ecology Letters 2008, 11:461-469.
-
(2008)
Ecology Letters
, vol.11
, pp. 461-469
-
-
Bradley, D.J.1
Gilbert, G.S.2
Martiny, J.B.H.3
-
12
-
-
0000286531
-
An ordination of the upland forest communities of Southern Wisconsin
-
Bray J.R., Curtis J.T. An ordination of the upland forest communities of Southern Wisconsin. Ecological Monographs 1957, 27:325-349.
-
(1957)
Ecological Monographs
, vol.27
, pp. 325-349
-
-
Bray, J.R.1
Curtis, J.T.2
-
13
-
-
0000120751
-
L'indice foliaire des couverts forestiers: mesure, variabilité et rôle fonctionnel
-
Bréda N. L'indice foliaire des couverts forestiers: mesure, variabilité et rôle fonctionnel. Revue forestière française 1999, 2:135-150.
-
(1999)
Revue forestière française
, vol.2
, pp. 135-150
-
-
Bréda, N.1
-
14
-
-
70349482733
-
454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity
-
Buée M., Reich M., Murat C., Morin E., Nilsson R.H., Uroz S., Martin F. 454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity. New Phytologist 2009, 184:449-456.
-
(2009)
New Phytologist
, vol.184
, pp. 449-456
-
-
Buée, M.1
Reich, M.2
Murat, C.3
Morin, E.4
Nilsson, R.H.5
Uroz, S.6
Martin, F.7
-
15
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso J.G., Kuczynski J., Stombaugh J., Bittinger K., Bushman F.D., Costello E.K., Fierer N., Pena A.G., Goodrich J.K., Gordon J.I., Huttley G.A., Kelley S.T., Knights D., Koenig J.E., Ley R.E., Lozupone C.A., McDonald D., Muegge B.D., Pirrung M., Reeder J., Sevinsky J.R., Tumbaugh P.J., Walters W.A., Widmann J., Yatsunenko T., Zaneveld J., Knight R. QIIME allows analysis of high-throughput community sequencing data. Nature Methods 2010, 7:335-336.
-
(2010)
Nature Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Tumbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
16
-
-
0033543675
-
Fungal endophyte symbiosis and plant diversity in successional fields
-
Clay K., Holah J. Fungal endophyte symbiosis and plant diversity in successional fields. Science 1999, 285:1742-1744.
-
(1999)
Science
, vol.285
, pp. 1742-1744
-
-
Clay, K.1
Holah, J.2
-
17
-
-
51449097488
-
The yeast spore wall enables spores to survive passage through the digestive tract of Drosophila
-
Coluccio A.E., Rodriguez R.K., Kernan M.J., Neiman A.M. The yeast spore wall enables spores to survive passage through the digestive tract of Drosophila. PLoS ONE 2008, 3(8):e2873. 10.1371/journal.pone.0002873.
-
(2008)
PLoS ONE
, vol.3
, Issue.8
-
-
Coluccio, A.E.1
Rodriguez, R.K.2
Kernan, M.J.3
Neiman, A.M.4
-
18
-
-
78149365938
-
Insidious effects of sequencing errors on perceived diversity in molecular surveys
-
Dickie I.A. Insidious effects of sequencing errors on perceived diversity in molecular surveys. New Phytologist 2010, 188:916-918.
-
(2010)
New Phytologist
, vol.188
, pp. 916-918
-
-
Dickie, I.A.1
-
19
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar R.C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 2010, 26:2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
20
-
-
0030060552
-
Simplifying the jargon of community ecology: a conceptual approach
-
Fauth J.E., Bernardo J., Camara M., Resetarits W.J., Buskirk J.V., McCollum S.A. Simplifying the jargon of community ecology: a conceptual approach. The American Naturalist 1996, 147:282-286.
-
(1996)
The American Naturalist
, vol.147
, pp. 282-286
-
-
Fauth, J.E.1
Bernardo, J.2
Camara, M.3
Resetarits, W.J.4
Buskirk, J.V.5
McCollum, S.A.6
-
21
-
-
69149106509
-
High diversity of fungi in air particulate matter
-
Fröhlich-Nowoisky J., Pickersgill D.A., Despres V.R., Poschl U. High diversity of fungi in air particulate matter. Proceedings of the National Academy of Sciences of the United States of America 2009, 106:12814-12819.
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, pp. 12814-12819
-
-
Fröhlich-Nowoisky, J.1
Pickersgill, D.A.2
Despres, V.R.3
Poschl, U.4
-
22
-
-
69249232189
-
Phenotypic plasticity and integration across the canopy of Olea europaea Subsp guanchica (Oleaceae) in populations with different wind exposures
-
Garcia-Verdugo C., Granado-Yela C., Manrique E., de Casas R.R., Balaguer L. Phenotypic plasticity and integration across the canopy of Olea europaea Subsp guanchica (Oleaceae) in populations with different wind exposures. American Journal of Botany 2009, 96:1454-1461.
-
(2009)
American Journal of Botany
, vol.96
, pp. 1454-1461
-
-
Garcia-Verdugo, C.1
Granado-Yela, C.2
Manrique, E.3
de Casas, R.R.4
Balaguer, L.5
-
23
-
-
0027580147
-
Its primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts
-
Gardes M., Bruns T.D. Its primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Molecular Ecology 1993, 2:113-118.
-
(1993)
Molecular Ecology
, vol.2
, pp. 113-118
-
-
Gardes, M.1
Bruns, T.D.2
-
24
-
-
0036028772
-
Evolutionary ecology of plant diseases in natural ecosystems
-
Gilbert G.S. Evolutionary ecology of plant diseases in natural ecosystems. Annual Review of Phytopathology 2002, 40:13-43.
-
(2002)
Annual Review of Phytopathology
, vol.40
, pp. 13-43
-
-
Gilbert, G.S.1
-
25
-
-
37649025929
-
The ecodist package for dissimilarity-based analysis of ecological data
-
Goslee S.C., Urban D.L. The ecodist package for dissimilarity-based analysis of ecological data. Journal of Statistical Software 2007, 22:1-19.
-
(2007)
Journal of Statistical Software
, vol.22
, pp. 1-19
-
-
Goslee, S.C.1
Urban, D.L.2
-
26
-
-
71549157182
-
Assessment of phylloplane yeasts on selected Mediterranean plants by FISH with group- and species-specific oligonucleotide probes
-
Inácio J., Ludwig W., Spencer-Martins I., Fonseca Á. Assessment of phylloplane yeasts on selected Mediterranean plants by FISH with group- and species-specific oligonucleotide probes. FEMS Microbiology Ecology 2010, 71:61-72.
-
(2010)
FEMS Microbiology Ecology
, vol.71
, pp. 61-72
-
-
Inácio, J.1
Ludwig, W.2
Spencer-Martins, I.3
Fonseca, Á.4
-
27
-
-
0036835126
-
Estimation and diversity of phylloplane mycobiota on selected plants in a Mediterranean-type ecosystem in Portugal
-
Inácio J., Pereira P., Carvalho M., Fonseca Á., Amaral-Collaço M.T., Spencer-Martins I. Estimation and diversity of phylloplane mycobiota on selected plants in a Mediterranean-type ecosystem in Portugal. Microbial Ecology 2002, 44:344-353.
-
(2002)
Microbial Ecology
, vol.44
, pp. 344-353
-
-
Inácio, J.1
Pereira, P.2
Carvalho, M.3
Fonseca, Á.4
Amaral-Collaço, M.T.5
Spencer-Martins, I.6
-
28
-
-
0742304296
-
Characterisation and classification of phylloplane yeasts from Portugal related to the genus Taphrina and description of five novel Lalaria species
-
Inácio J., Rodrigues M.G., Sobral P., Fonseca A. Characterisation and classification of phylloplane yeasts from Portugal related to the genus Taphrina and description of five novel Lalaria species. FEMS Yeast Research 2004, 4:541-555.
-
(2004)
FEMS Yeast Research
, vol.4
, pp. 541-555
-
-
Inácio, J.1
Rodrigues, M.G.2
Sobral, P.3
Fonseca, A.4
-
29
-
-
70349112258
-
Diversity and distribution of fungal foliar endophytes in New Zealand Podocarpaceae
-
Joshee S., Paulus B.C., Park D., Johnston P.R. Diversity and distribution of fungal foliar endophytes in New Zealand Podocarpaceae. Mycological Research 2009, 113:1003-1015.
-
(2009)
Mycological Research
, vol.113
, pp. 1003-1015
-
-
Joshee, S.1
Paulus, B.C.2
Park, D.3
Johnston, P.R.4
-
30
-
-
70349493057
-
Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperate Quercus macrocarpa phyllosphere
-
Jumpponen A., Jones K.L. Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperate Quercus macrocarpa phyllosphere. New Phytologist 2009, 184:438-448.
-
(2009)
New Phytologist
, vol.184
, pp. 438-448
-
-
Jumpponen, A.1
Jones, K.L.2
-
31
-
-
77954695245
-
Seasonally dynamic fungal communities in the Quercus macrocarpa phyllosphere differ between urban and nonurban environments
-
Jumpponen A., Jones K.L. Seasonally dynamic fungal communities in the Quercus macrocarpa phyllosphere differ between urban and nonurban environments. New Phytologist 2010, 186:496-513.
-
(2010)
New Phytologist
, vol.186
, pp. 496-513
-
-
Jumpponen, A.1
Jones, K.L.2
-
32
-
-
0030614144
-
Microbial population dynamics on leaves
-
Kinkel L.L. Microbial population dynamics on leaves. Annual Review of Phytopathology 1997, 35:327-347.
-
(1997)
Annual Review of Phytopathology
, vol.35
, pp. 327-347
-
-
Kinkel, L.L.1
-
34
-
-
33645752843
-
Contribution of leaf surface fungi to the air spora
-
Levetin E., Dorsey K. Contribution of leaf surface fungi to the air spora. Aerobiologia 2006, 22:3-12.
-
(2006)
Aerobiologia
, vol.22
, pp. 3-12
-
-
Levetin, E.1
Dorsey, K.2
-
35
-
-
80051698839
-
Intra-genomic variation in the ITS rDNA region obscures phylogenetic relationships and inflates estimates of operational taxonomic units in genus Laetiporus
-
Lindner D.L., Banik M.T. Intra-genomic variation in the ITS rDNA region obscures phylogenetic relationships and inflates estimates of operational taxonomic units in genus Laetiporus. Mycologia 2011, 103:731-740.
-
(2011)
Mycologia
, vol.103
, pp. 731-740
-
-
Lindner, D.L.1
Banik, M.T.2
-
37
-
-
0033986064
-
Role of leaf surface sugars in colonization of plants by bacterial epiphytes
-
Mercier J., Lindow S.E. Role of leaf surface sugars in colonization of plants by bacterial epiphytes. Applied and Environmental Microbiology 2000, 66:369-374.
-
(2000)
Applied and Environmental Microbiology
, vol.66
, pp. 369-374
-
-
Mercier, J.1
Lindow, S.E.2
-
38
-
-
68949116293
-
StatFingerprints: a friendly graphical interface program for processing and analysis of microbial fingerprint profiles
-
Michelland R.J., Dejean S., Combes S., Fortun-Lamothe L., Cauquil L. StatFingerprints: a friendly graphical interface program for processing and analysis of microbial fingerprint profiles. Molecular Ecology Resources 2009, 9:1359-1363.
-
(2009)
Molecular Ecology Resources
, vol.9
, pp. 1359-1363
-
-
Michelland, R.J.1
Dejean, S.2
Combes, S.3
Fortun-Lamothe, L.4
Cauquil, L.5
-
39
-
-
70349938064
-
Spatial and temporal variations of the bacterial community in the bovine digestive tract
-
Michelland R.J., Monteils V., Zened A., Combes S., Cauquil L., Gidenne T., Hamelin J., Fortun-Lamothe L. Spatial and temporal variations of the bacterial community in the bovine digestive tract. Journal of Applied Microbiology 2009, 107:1642-1650.
-
(2009)
Journal of Applied Microbiology
, vol.107
, pp. 1642-1650
-
-
Michelland, R.J.1
Monteils, V.2
Zened, A.3
Combes, S.4
Cauquil, L.5
Gidenne, T.6
Hamelin, J.7
Fortun-Lamothe, L.8
-
40
-
-
0141959524
-
Fifty years of phyllosphere microbiology: significant contributions to research in related fields
-
American Phytopathological Society, St Paul, S.E. Lindow, E.I. HechtPoinar, V.J. Elliott (Eds.)
-
Morris C.E., Kinkel L.L. Fifty years of phyllosphere microbiology: significant contributions to research in related fields. Phyllosphere Microbiology 2002, 365-375. American Phytopathological Society, St Paul. S.E. Lindow, E.I. HechtPoinar, V.J. Elliott (Eds.).
-
(2002)
Phyllosphere Microbiology
, pp. 365-375
-
-
Morris, C.E.1
Kinkel, L.L.2
-
41
-
-
0031959006
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
-
Muyzer G., Smalla K. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek 1998, 73:127-141.
-
(1998)
Antonie van Leeuwenhoek
, vol.73
, pp. 127-141
-
-
Muyzer, G.1
Smalla, K.2
-
42
-
-
77955267135
-
Pathogenesis, parasitism and mutualism in the trophic space of microbe-plant interactions
-
Newton A.C., Fitt B.D.L., Atkins S.D., Walters D.R., Daniell T.J. Pathogenesis, parasitism and mutualism in the trophic space of microbe-plant interactions. Trends in Microbiology 2010, 18:365-373.
-
(2010)
Trends in Microbiology
, vol.18
, pp. 365-373
-
-
Newton, A.C.1
Fitt, B.D.L.2
Atkins, S.D.3
Walters, D.R.4
Daniell, T.J.5
-
43
-
-
45749142504
-
Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification
-
Nilsson R.H., Kristiansson E., Ryberg M., Hallenberg N., Larsson K.H. Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification. Evolutionary Bioinformatics Online 2008, 4:193-201.
-
(2008)
Evolutionary Bioinformatics Online
, vol.4
, pp. 193-201
-
-
Nilsson, R.H.1
Kristiansson, E.2
Ryberg, M.3
Hallenberg, N.4
Larsson, K.H.5
-
44
-
-
67149109995
-
The ITS region as a target for characterization of fungal communities using emerging sequencing technologies
-
Nilsson R.H., Ryberg M., Abarenkov K., Sjokvist E., Kristiansson E. The ITS region as a target for characterization of fungal communities using emerging sequencing technologies. FEMS Microbiology Letters 2009, 296:97-101.
-
(2009)
FEMS Microbiology Letters
, vol.296
, pp. 97-101
-
-
Nilsson, R.H.1
Ryberg, M.2
Abarenkov, K.3
Sjokvist, E.4
Kristiansson, E.5
-
45
-
-
77956292565
-
An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology
-
Nilsson R.H., Veldre V., Hartmann M., Unterseher M., Amend A., Bergsten J., Kristiansson E., Ryberg M., Jumpponen A., Abarenkov K. An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology. Fungal Ecology 2010, 3:284-287.
-
(2010)
Fungal Ecology
, vol.3
, pp. 284-287
-
-
Nilsson, R.H.1
Veldre, V.2
Hartmann, M.3
Unterseher, M.4
Amend, A.5
Bergsten, J.6
Kristiansson, E.7
Ryberg, M.8
Jumpponen, A.9
Abarenkov, K.10
-
46
-
-
70349255569
-
-
R package version 1.17-4
-
Oksanen J.F., Blanchet G., Kindt R., Legendre P., O'Hara R.B., Simpson G.L., Solymos P., Stevens M.H.M., Wagner H. vegan: community ecology package 2010, R package version 1.17-4. http://cran.r-project.org/package%20%3d%20vegan.
-
(2010)
vegan: community ecology package
-
-
Oksanen, J.F.1
Blanchet, G.2
Kindt, R.3
Legendre, P.4
O'Hara, R.B.5
Simpson, G.L.6
Solymos, P.7
Stevens, M.H.M.8
Wagner, H.9
-
47
-
-
0035804241
-
Symbiotic fungal endophytes control insect host-parasite interaction webs
-
Omacini M., Chaneton E.J., Ghersa C.M., Muller C.B. Symbiotic fungal endophytes control insect host-parasite interaction webs. Nature 2001, 409:78-81.
-
(2001)
Nature
, vol.409
, pp. 78-81
-
-
Omacini, M.1
Chaneton, E.J.2
Ghersa, C.M.3
Muller, C.B.4
-
48
-
-
33749828295
-
Role of phyllosphere fungi of forest trees in the development of decomposer fungal communities and decomposition processes of leaf litter
-
Osono T. Role of phyllosphere fungi of forest trees in the development of decomposer fungal communities and decomposition processes of leaf litter. Canadian Journal of Microbiology 2006, 52:701-716.
-
(2006)
Canadian Journal of Microbiology
, vol.52
, pp. 701-716
-
-
Osono, T.1
-
49
-
-
69549112742
-
Accurate determination of microbial diversity from 454 pyrosequencing data
-
639-U627
-
Quince C., Lanzen A., Curtis T.P., Davenport R.J., Hall N., Head I.M., Read L.F., Sloan W.T. Accurate determination of microbial diversity from 454 pyrosequencing data. Nature Methods 2009, 6. 639-U627.
-
(2009)
Nature Methods
, vol.6
-
-
Quince, C.1
Lanzen, A.2
Curtis, T.P.3
Davenport, R.J.4
Hall, N.5
Head, I.M.6
Read, L.F.7
Sloan, W.T.8
-
50
-
-
77954175387
-
R Development Core Team
-
R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team R: a language and environment for statistical computing 2010, R Foundation for Statistical Computing, Vienna, Austria.
-
(2010)
R: a language and environment for statistical computing
-
-
-
51
-
-
77957885485
-
The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves
-
Redford A.J., Bowers R.M., Knight R., Linhart Y., Fierer N. The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves. Environmental Microbiology 2010, 12:2885-2893.
-
(2010)
Environmental Microbiology
, vol.12
, pp. 2885-2893
-
-
Redford, A.J.1
Bowers, R.M.2
Knight, R.3
Linhart, Y.4
Fierer, N.5
-
52
-
-
69549129476
-
The 'rare biosphere': a reality check
-
Reeder J., Knight R. The 'rare biosphere': a reality check. Nature Methods 2009, 6:636-637.
-
(2009)
Nature Methods
, vol.6
, pp. 636-637
-
-
Reeder, J.1
Knight, R.2
-
53
-
-
84864082829
-
More than 400 million years of evolution and plants still can't make it on their own: plant stress tolerance and habitat expansion via fungal symbiosis
-
Rodriguez R., Redman R. More than 400 million years of evolution and plants still can't make it on their own: plant stress tolerance and habitat expansion via fungal symbiosis. Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology 2007, 146:20.
-
(2007)
Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology
, vol.146
, pp. 20
-
-
Rodriguez, R.1
Redman, R.2
-
54
-
-
63449129221
-
Fungal endophytes: diversity and functional roles
-
Rodriguez R.J., White J.F., Arnold A.E., Redman R.S. Fungal endophytes: diversity and functional roles. New Phytologist 2009, 182:314-330.
-
(2009)
New Phytologist
, vol.182
, pp. 314-330
-
-
Rodriguez, R.J.1
White, J.F.2
Arnold, A.E.3
Redman, R.S.4
-
55
-
-
0032442691
-
Fungal endophytes: a continuum of interactions with host plants
-
Saikkonen K., Faeth S.H., Helander M., Sullivan T.J. Fungal endophytes: a continuum of interactions with host plants. Annual Review of Ecology and Systematics 1998, 29:319-343.
-
(1998)
Annual Review of Ecology and Systematics
, vol.29
, pp. 319-343
-
-
Saikkonen, K.1
Faeth, S.H.2
Helander, M.3
Sullivan, T.J.4
-
56
-
-
79951799497
-
Fungal species diversity in juvenile and adult leaves of Eucalyptus globulus from plantations affected by Mycosphaerella leaf disease
-
Sánchez Márquez S., Bills G.F., Zabalgogeazcoa I. Fungal species diversity in juvenile and adult leaves of Eucalyptus globulus from plantations affected by Mycosphaerella leaf disease. Annals of Applied Biology 2011, 158:177-187.
-
(2011)
Annals of Applied Biology
, vol.158
, pp. 177-187
-
-
Sánchez Márquez, S.1
Bills, G.F.2
Zabalgogeazcoa, I.3
-
58
-
-
65349088516
-
Progress towards DNA barcoding of fungi
-
Seifert K.A. Progress towards DNA barcoding of fungi. Molecular Ecology Resources 2009, 9:83-89.
-
(2009)
Molecular Ecology Resources
, vol.9
, pp. 83-89
-
-
Seifert, K.A.1
-
59
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure J., Ji H. Next-generation DNA sequencing. Nature Biotechnology 2008, 26:1135-1145.
-
(2008)
Nature Biotechnology
, vol.26
, pp. 1135-1145
-
-
Shendure, J.1
Ji, H.2
-
60
-
-
85005376325
-
Endophytic fungi in leaves and twigs of healthy and diseased beech trees (Fagus sylvatica L.)
-
Sieber T., Hugentobler C. Endophytic fungi in leaves and twigs of healthy and diseased beech trees (Fagus sylvatica L.). European Journal of Forest Pathology 1987, 17:411-425.
-
(1987)
European Journal of Forest Pathology
, vol.17
, pp. 411-425
-
-
Sieber, T.1
Hugentobler, C.2
-
61
-
-
34548616090
-
Endophytic fungi in forest trees: are they mutualists?
-
Sieber T.N. Endophytic fungi in forest trees: are they mutualists?. Fungal Biology Reviews 2007, 21:75-89.
-
(2007)
Fungal Biology Reviews
, vol.21
, pp. 75-89
-
-
Sieber, T.N.1
-
62
-
-
70349895207
-
Powdery mildew-infection changes bacterial community composition in the phyllosphere
-
Suda W., Nagasaki A., Shishido M. Powdery mildew-infection changes bacterial community composition in the phyllosphere. Microbes and Environments 2009, 24:217-223.
-
(2009)
Microbes and Environments
, vol.24
, pp. 217-223
-
-
Suda, W.1
Nagasaki, A.2
Shishido, M.3
-
63
-
-
0028175205
-
Within-tree and among-tree variation in leaf characteristics of mountain birch and its implications for herbivory
-
Suomela J., Ayres M.P. Within-tree and among-tree variation in leaf characteristics of mountain birch and its implications for herbivory. Oikos 1994, 70:212-222.
-
(1994)
Oikos
, vol.70
, pp. 212-222
-
-
Suomela, J.1
Ayres, M.P.2
-
64
-
-
78651322088
-
Species abundance distributions and richness estimations in fungal metagenomics - lessons learned from community ecology
-
Unterseher M., Jumpponen A., Opik M., Tedersoo L., Moora M., Dormann C.F., Schnittler M. Species abundance distributions and richness estimations in fungal metagenomics - lessons learned from community ecology. Molecular Ecology 2011, 20:275-285.
-
(2011)
Molecular Ecology
, vol.20
, pp. 275-285
-
-
Unterseher, M.1
Jumpponen, A.2
Opik, M.3
Tedersoo, L.4
Moora, M.5
Dormann, C.F.6
Schnittler, M.7
-
65
-
-
34548647137
-
Species richness and distribution patterns of leaf-inhabiting endophytic fungi in a temperate forest canopy
-
Unterseher M., Reiher A., Finstermeier K., Otto P., Morawetz W. Species richness and distribution patterns of leaf-inhabiting endophytic fungi in a temperate forest canopy. Mycological Progress 2007, 6:201-212.
-
(2007)
Mycological Progress
, vol.6
, pp. 201-212
-
-
Unterseher, M.1
Reiher, A.2
Finstermeier, K.3
Otto, P.4
Morawetz, W.5
-
66
-
-
67349124387
-
Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.) - different cultivation techniques influence fungal biodiversity assessment
-
Unterseher M., Schnittler M. Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.) - different cultivation techniques influence fungal biodiversity assessment. Mycological Research 2009, 113:645-654.
-
(2009)
Mycological Research
, vol.113
, pp. 645-654
-
-
Unterseher, M.1
Schnittler, M.2
-
67
-
-
77956945290
-
Species richness analysis and ITS rDNA phylogeny revealed the majority of cultivable foliar endophytes from beech (Fagus sylvatica)
-
Unterseher M., Schnittler M. Species richness analysis and ITS rDNA phylogeny revealed the majority of cultivable foliar endophytes from beech (Fagus sylvatica). Fungal Ecology 2010, 3:366-378.
-
(2010)
Fungal Ecology
, vol.3
, pp. 366-378
-
-
Unterseher, M.1
Schnittler, M.2
-
68
-
-
0027133007
-
Infection of beech leaves (Fagus sylvatica) by the endophyte Discula umbrinella (Teleomorph, Apiognomonia errabunda) - low-temperature scanning electron-microscopy studies
-
Viret O., Scheidegger C., Petrini O. Infection of beech leaves (Fagus sylvatica) by the endophyte Discula umbrinella (Teleomorph, Apiognomonia errabunda) - low-temperature scanning electron-microscopy studies. Canadian Journal of Botany-Revue Canadienne De Botanique 1994, 71:1520-1527.
-
(1994)
Canadian Journal of Botany-Revue Canadienne De Botanique
, vol.71
, pp. 1520-1527
-
-
Viret, O.1
Scheidegger, C.2
Petrini, O.3
-
69
-
-
59349099422
-
Leaf phenology sensitivity to temperature in European trees: do within-species populations exhibit similar responses?
-
Vitasse Y., Delzon S., Dufrene E., Pontailler J.Y., Louvet J.M., Kremer A., Michalet R. Leaf phenology sensitivity to temperature in European trees: do within-species populations exhibit similar responses?. Agricultural and Forest Meteorology 2009, 149:735-744.
-
(2009)
Agricultural and Forest Meteorology
, vol.149
, pp. 735-744
-
-
Vitasse, Y.1
Delzon, S.2
Dufrene, E.3
Pontailler, J.Y.4
Louvet, J.M.5
Kremer, A.6
Michalet, R.7
-
70
-
-
56649114468
-
Phyllosphere microbiology with special reference to diversity and plant genotype
-
Whipps J.M., Hand P., Pink D., Bending G.D. Phyllosphere microbiology with special reference to diversity and plant genotype. Journal of Applied Microbiology 2008, 105:1744-1755.
-
(2008)
Journal of Applied Microbiology
, vol.105
, pp. 1744-1755
-
-
Whipps, J.M.1
Hand, P.2
Pink, D.3
Bending, G.D.4
-
71
-
-
0000432452
-
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
-
Academic Press, Inc., New York, M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.)
-
White T.J., Bruns T., Lee S., Taylor J.W. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: a guide to methods and applications 1990, 315-322. Academic Press, Inc., New York. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
-
(1990)
PCR Protocols: a guide to methods and applications
, pp. 315-322
-
-
White, T.J.1
Bruns, T.2
Lee, S.3
Taylor, J.W.4
-
72
-
-
0033807791
-
Contribution of fungal loline alkaloids to protection from aphids in a grass-endophyte mutualism
-
Wilkinson H.H., Siegel M.R., Blankenship J.D., Mallory A.C., Bush L.P., Schardl C.L. Contribution of fungal loline alkaloids to protection from aphids in a grass-endophyte mutualism. Molecular Plant-Microbe Interactions 2000, 13:1027-1033.
-
(2000)
Molecular Plant-Microbe Interactions
, vol.13
, pp. 1027-1033
-
-
Wilkinson, H.H.1
Siegel, M.R.2
Blankenship, J.D.3
Mallory, A.C.4
Bush, L.P.5
Schardl, C.L.6
-
73
-
-
37349086066
-
CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies
-
Zinger L., Gury J., Alibeu A., Rioux D., Gielly L., Sage L., Pompanon F., Geremia R.A. CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies. Journal of Microbiological Methods 2008, 72:42-53.
-
(2008)
Journal of Microbiological Methods
, vol.72
, pp. 42-53
-
-
Zinger, L.1
Gury, J.2
Alibeu, A.3
Rioux, D.4
Gielly, L.5
Sage, L.6
Pompanon, F.7
Geremia, R.A.8
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