-
1
-
-
84876556918
-
EcoCyc: fusing model organism databases with systems biology
-
Keseler IM, Mackie A, Peralta-Gil M, Santos-Zavaleta A, Gama-Castro S, Bonavides-Martinez C, Fulcher C, Huerta AM, Kothari A, Krummenacker M, Latendresse M, Muniz-Rascado L, Ong Q, Paley S, Schroder I, Shearer AG, Subhraveti P, Travers M, Weerasinghe D, Weiss V, Collado-Vides J, Gunsalus RP, Paulsen I, Karp PD. 2013. EcoCyc: fusing model organism databases with systems biology. Nucleic Acids Res. 41: D605-D612.
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Keseler, I.M.1
Mackie, A.2
Peralta-Gil, M.3
Santos-Zavaleta, A.4
Gama-Castro, S.5
Bonavides-Martinez, C.6
Fulcher, C.7
Huerta, A.M.8
Kothari, A.9
Krummenacker, M.10
Latendresse, M.11
Muniz-Rascado, L.12
Ong, Q.13
Paley, S.14
Schroder, I.15
Shearer, A.G.16
Subhraveti, P.17
Travers, M.18
Weerasinghe, D.19
Weiss, V.20
Collado-Vides, J.21
Gunsalus, R.P.22
Paulsen, I.23
Karp, P.D.24
more..
-
2
-
-
0036718981
-
Evidence for Cu(I)-thiolate ligation and prediction of a putative copper-binding site in the Escherichia coliNADH dehydrogenase-2
-
Rapisarda VA, Chehin RN, De Las Rivas J, Rodriguez-Montelongo L, Farias RN, Massa EM. 2002. Evidence for Cu(I)-thiolate ligation and prediction of a putative copper-binding site in the Escherichia coliNADH dehydrogenase-2. Arch. Biochem. Biophys. 405:87-94.
-
(2002)
Arch. Biochem. Biophys
, vol.405
, pp. 87-94
-
-
Rapisarda, V.A.1
Chehin, R.N.2
De Las Rivas, J.3
Rodriguez-Montelongo, L.4
Farias, R.N.5
Massa, E.M.6
-
3
-
-
0023102226
-
2-Phenylethylamine catabolism by Escherichia coli K12
-
Parrott S, Jones S, Cooper RA. 1987. 2-Phenylethylamine catabolism by Escherichia coli K12. J. Gen. Microbiol. 133:347-351.
-
(1987)
J. Gen. Microbiol
, vol.133
, pp. 347-351
-
-
Parrott, S.1
Jones, S.2
Cooper, R.A.3
-
4
-
-
0027965409
-
Generation of the topa quinone cofactor in bacterial monoamine oxidase by cupric ion-dependent autooxidation of a specific tyrosyl residue
-
Matsuzaki R, Fukui T, Sato H, Ozaki Y, Tanizawa K. 1994. Generation of the topa quinone cofactor in bacterial monoamine oxidase by cupric ion-dependent autooxidation of a specific tyrosyl residue. FEBS Lett. 351: 360-364.
-
(1994)
FEBS Lett
, vol.351
, pp. 360-364
-
-
Matsuzaki, R.1
Fukui, T.2
Sato, H.3
Ozaki, Y.4
Tanizawa, K.5
-
5
-
-
0029645871
-
Crystal structure of a quinoenzyme: copper amine oxidase of Escherichia coli at 2 Å resolution
-
Parsons MR, Convery MA, Wilmot CM, Yadav KD, Blakeley V, Corner AS, Phillips SE, McPherson MJ, Knowles PF. 1995. Crystal structure of a quinoenzyme: copper amine oxidase of Escherichia coli at 2 Å resolution. Structure 3:1171-1184.
-
(1995)
Structure
, vol.3
, pp. 1171-1184
-
-
Parsons, M.R.1
Convery, M.A.2
Wilmot, C.M.3
Yadav, K.D.4
Blakeley, V.5
Corner, A.S.6
Phillips, S.E.7
McPherson, M.J.8
Knowles, P.F.9
-
6
-
-
0032562114
-
Overexpression of a hydrogen peroxide-resistant periplasmic Cu, Zn superoxide dismutase protects Escherichia coli from macrophage killing. Biochem.
-
Battistoni A, Donnarumma G, Greco R, Valenti P, Rotilio G. 1998. Overexpression of a hydrogen peroxide-resistant periplasmic Cu, Zn superoxide dismutase protects Escherichia coli from macrophage killing. Biochem. Biophys. Res. Commun. 243:804-807.
-
(1998)
Biophys. Res. Commun.
, vol.243
, pp. 804-807
-
-
Battistoni, A.1
Donnarumma, G.2
Greco, R.3
Valenti, P.4
Rotilio, G.5
-
7
-
-
80054808738
-
Crystal structures of multicopper oxidase CueO bound to copper(I) and silver(I): functional role of a methionine-rich sequence
-
Singh SK, Roberts SA, McDevitt SF, Weichsel A, Wildner GF, Grass GB, Rensing C, Montfort WR. 2011. Crystal structures of multicopper oxidase CueO bound to copper(I) and silver(I): functional role of a methionine-rich sequence. J. Biol. Chem. 286:37849-37857.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 37849-37857
-
-
Singh, S.K.1
Roberts, S.A.2
McDevitt, S.F.3
Weichsel, A.4
Wildner, G.F.5
Grass, G.B.6
Rensing, C.7
Montfort, W.R.8
-
8
-
-
34447128589
-
-
U.S. Department of Agriculture USDA National Agricultural Statistics Service, Washington, DC
-
U.S. Department of Agriculture. 2006. Agricultural chemical usage 2005 field crops summary. USDA National Agricultural Statistics Service, Washington, DC.
-
(2006)
Agricultural chemical usage 2005 field crops summary
-
-
-
9
-
-
84873055243
-
A fresh view of the cell biology of copper in enterobacteria
-
Nies DH, Herzberg M. 2013. A fresh view of the cell biology of copper in enterobacteria. Mol. Microbiol. 87:447-454.
-
(2013)
Mol. Microbiol.
, vol.87
, pp. 447-454
-
-
Nies, D.H.1
Herzberg, M.2
-
10
-
-
0035968001
-
Femtomolar sensitivity of metalloregulatory proteins controlling zinc homeostasis
-
Outten CE, O'Halloran TV. 2001. Femtomolar sensitivity of metalloregulatory proteins controlling zinc homeostasis. Science 292:2488-2492.
-
(2001)
Science
, vol.292
, pp. 2488-2492
-
-
Outten, C.E.1
O'Halloran, T.V.2
-
11
-
-
35448993202
-
-
In Nies DH, Silver S (ed), Molecular microbiology of heavy metals. Springer, New York, NY
-
Nies DH. 2007. Bacterial transition metal homeostasis, p 117-142. In Nies DH, Silver S (ed), Molecular microbiology of heavy metals. Springer, New York, NY.
-
(2007)
Bacterial transition metal homeostasis
-
-
Nies, D.H.1
-
12
-
-
84885458164
-
Copper efflux is induced during anaerobic amino acid limitation in Escherichia coli to protect ironsulfur cluster enzymes and biogenesis
-
Fung DKC, Lau WY, Chan WT, Yan A. 2013. Copper efflux is induced during anaerobic amino acid limitation in Escherichia coli to protect ironsulfur cluster enzymes and biogenesis. J. Bacteriol. 195:4556-4568.
-
(2013)
J. Bacteriol
, vol.195
, pp. 4556-4568
-
-
Fung, D.K.C.1
Lau, W.Y.2
Chan, W.T.3
Yan, A.4
-
13
-
-
66249112833
-
The iron-sulfur clusters of dehydratases are primary intracellular targets of copper toxicity
-
Macomber L, Imlay JA. 2009. The iron-sulfur clusters of dehydratases are primary intracellular targets of copper toxicity. Proc. Natl. Acad. Sci. U. S. A. 106:8344-8349.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 8344-8349
-
-
Macomber, L.1
Imlay, J.A.2
-
14
-
-
33947364844
-
Intracellular copper does not catalyze the formation of oxidative DNA damage in Escherichia coli
-
Macomber L, Rensing C, Imlay JA. 2007. Intracellular copper does not catalyze the formation of oxidative DNA damage in Escherichia coli. J. Bacteriol. 189:1616-1626.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 1616-1626
-
-
Macomber, L.1
Rensing, C.2
Imlay, J.A.3
-
15
-
-
77952056332
-
Copper stress affects iron homeostasis by destabilizing iron-sulfur cluster formation in Bacillus subtilis
-
Chillappagari S, Seubert A, Trip H, Kuipers OP, Marahiel MA, Miethke M.2010. Copper stress affects iron homeostasis by destabilizing iron-sulfur cluster formation in Bacillus subtilis. J. Bacteriol. 192:2512-2524.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 2512-2524
-
-
Chillappagari, S.1
Seubert, A.2
Trip, H.3
Kuipers, O.P.4
Marahiel, M.A.5
Miethke, M.6
-
16
-
-
0035903128
-
The independent cue and cus systems confer copper tolerance during aerobic and anaerobic growth in Escherichia coli
-
Outten FW, Huffman DL, Hale JA, O'Halloran TV. 2001. The independent cue and cus systems confer copper tolerance during aerobic and anaerobic growth in Escherichia coli. J. Biol. Chem. 276:30670-30677.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 30670-30677
-
-
Outten, F.W.1
Huffman, D.L.2
Hale, J.A.3
O'Halloran, T.V.4
-
17
-
-
0034613337
-
Transcriptional activation of an Escherichia coli copper efflux regulon by the chromosomal MerR homologue, cueR
-
Outten FW, Outten CE, Hale J, O'Halloran TV. 2000. Transcriptional activation of an Escherichia coli copper efflux regulon by the chromosomal MerR homologue, cueR. J. Biol. Chem. 275:31024-31029.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 31024-31029
-
-
Outten, F.W.1
Outten, C.E.2
Hale, J.3
O'Halloran, T.V.4
-
18
-
-
78650791250
-
The Cus efflux system removes toxic ions via a methionine shuttle
-
Su CC, Long F, Yu EW. 2011. The Cus efflux system removes toxic ions via a methionine shuttle. Protein Sci. 20:6-18.
-
(2011)
Protein Sci
, vol.20
, pp. 6-18
-
-
Su, C.C.1
Long, F.2
Yu, E.W.3
-
19
-
-
0033813832
-
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12
-
Munson GP, Lam DL, Outten FW, O'Halloran TV. 2000. Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12. J. Bacteriol. 182:5864-5871.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 5864-5871
-
-
Munson, G.P.1
Lam, D.L.2
Outten, F.W.3
O'Halloran, T.V.4
-
20
-
-
84859425452
-
Regulation of Cu(I)/Ag(I) efflux genes in Escherichia coli by the sensor kinase CusS
-
Gudipaty SA, Larsen AS, Rensing C, McEvoy MM. 2012. Regulation of Cu(I)/Ag(I) efflux genes in Escherichia coli by the sensor kinase CusS. FEMS Microbiol. Lett. 330:30-37.
-
(2012)
FEMS Microbiol. Lett.
, vol.330
, pp. 30-37
-
-
Gudipaty, S.A.1
Larsen, A.S.2
Rensing, C.3
McEvoy, M.M.4
-
21
-
-
84872956374
-
Iron/sulfur proteins biogenesis in prokaryotes: formation, regulation and diversity
-
Roche B, Aussel L, Ezraty B, Mandin P, Py B, Barras F. 2013. Iron/sulfur proteins biogenesis in prokaryotes: formation, regulation and diversity. Biochim. Biophys. Acta 1827:455-469.
-
(2013)
Biochim. Biophys. Acta
, vol.1827
, pp. 455-469
-
-
Roche, B.1
Aussel, L.2
Ezraty, B.3
Mandin, P.4
Py, B.5
Barras, F.6
-
22
-
-
45549085296
-
Predictive behavior within microbial genetic networks
-
Tagkopoulos I, Liu YC, Tavazoie S. 2008. Predictive behavior within microbial genetic networks. Science 320:1313-1317.
-
(2008)
Science
, vol.320
, pp. 1313-1317
-
-
Tagkopoulos, I.1
Liu, Y.C.2
Tavazoie, S.3
|