A multielement analysis of Cu induced changes in the mineral profiles of Cu sensitive and tolerant populations of Silene paradoxa L.

Environmental and Experimental Botany

Volumn 96, Issue , 2013, Pages 20-27

  Pignattelli, Sara ^a   Colzi, Ilaria ^a   Buccianti, Antonella ^a   Cattani, Ilenia ^b   Beone, Gian Maria ^b   Schat, Henk ^c   Gonnelli, Cristina ^a  

^a UNIVERSITY OF FLORENCE   (Italy)

^b UNIVERSITÀ CATTOLICA DEL SACRO CUORE   (Italy)

^c VU UNIVERSITY AMSTERDAM   (Netherlands)

Author keywords

Compositional data analysis; Copper tolerance; Mineral profile; Silene paradoxa

Indexed keywords

BIOACCUMULATION; CONCENTRATION (COMPOSITION); ECOTYPE; HERB; HOMEOSTASIS; HYDROPONICS; METAL; POLLUTION EXPOSURE; POPULATION STRUCTURE; ROOT-SHOOT RATIO; TOLERANCE; TOXICITY;

EID: 84885447328     PISSN: 00988472     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.envexpbot.2013.09.006     Document Type: Article

References (51)

1. Aitchison J. The Statistical Analysis of Compositional Data. Monographs on Statistics and Applied Probability 1986, Chapman and Hall Ltd., London.
2. Arnetoli M. Tossicità e tolleranza all'arsenico in due popolazioni di Silene paradoxa L. Bachelor Thesis 2004, Università di Firenze, Italy.
3. Baker A.J.M. Metal tolerance. New Phytol. 1987, 106:93-111.
4. Baker A.J.M. Accumulators and excluders strategies in the response of plants to heavy metals. J. Plant Nutr. 1981, 3:643-654.
5. Baxter I. Ionomics: studying the social network of mineral nutrients. Curr. Opin. Plant Biol. 2009, 12:381-386.
6. Baxter I. Ionomics: the functional genomics of elements. Brief. Funct. Genomics 2010, 9:149-156.
7. Borgheresi M., Buccianti A., Di Benedetto F., Vaughan D.J. Application of compositional techniques in the field of crystal chemistry: a case study of luzonite, a Sn-bearing mineral. Math. Geosci. 2013, 45(2):183-206.
8. Broadley M.R., White P.J., Hammond J.P., Zelko I., Lux A. Zinc in plants. New Phytol. 2007, 173:677-702.
9. Brooks R.R., Lee J., Reeves R.D., Jaffré T. Detection of nickeliferous rocks by analysis of herbarium specimens of indicator plants. J. Geochem. Explor. 1977, 7:49-57.
10. Buccianti A. Is compositional data analysis a way to see beyond the illusion?. Comput. Geosci. 2013, 50:165-173.
11. Buccianti A., Magli R. Metrics concepts and implications in describing compositional changes for world river's water chemistry. Comput. Geosci. 2011, 37:670-676.
12. Buescher E., Achberger T., Amusan I., Giannini A., Ochsenfeld C., Rus A., Lahner B., Hoekenga O., Yakubova E., Harper J.F., Guerinot M.L., Zhang M., Salt D.E., Baxter I.L. Natural genetic variation in selected populations of Arabidopsis thaliana is associated with ionomic differences. PLoS ONE 2010, 5:e11081.
13. Colzi I., Arnetoli M., Gallo A., Doumett S., Del Bubba M., Pignattelli S., Gabbrielli R., Gonnelli C. Copper tolerance strategies involving the root cell wall pectins in Silene paradoxa L. Environ. Exp. Bot. 2012, 78:91-98.
14. Colzi I., Doumett S., Del Bubba M., Fornaini J., Arnetoli M., Gabbrielli R., Gonnelli C. On the role of the cell wall in the phenomenon of copper tolerance in Silene paradoxa L. Environ. Exp. Bot. 2011, 72:77-83.
15. De Vos C.H.R., Schat H., Vooijs R., Ernst W.H.O. Copper induced damage to the permeability barrier in roots of Silene cucubalus. J. Plant Physiol. 1989, 135:164-169.
16. De Vos C.H.R., Schat H., De Waal M.A.M., Voojs R., Ernst W.H.O. Increased resistance to copper-induced damage of root cell plasmalemma in copper tolerant Silene cucubalus. Physiol. Plant 1991, 82:523-528.
17. Daunis-I-Estadella J., Barcelo-Vidal C., Buccianti A. Exploratory compositional data analysis. Compositional Data Analysis in the Geosciences: From Theory to Practice, Geological Society 2006, 26:161-174. Special Publications, London.
18. Enstone D.E., Peterson C.A., Ma F. Root endodermis and exodermis: structure, function, and responses to the environment. J. Plant Growth Regul. 2003, 21:335-351.
19. Ernst W.H.O. Evolution of metal tolerance in higher plants. For. Snow Landsc. Res. 2006, 80:251-274.
20. Gallo M., Buccianti A. Weighted principal component analysis for compositional data: application example for the water chemistry of the Arno river (Tuscany, central Italy). Environmetrics 2013, 24(4):269-277.
21. Ghandilyan A., Barboza L., Tisne S., Granier C., Reymond M., Koorneef M., Schat H., Aarts M.G.M. Genetic analysis identifies quantitative trait loci controlling rosette mineral concentrations in Arabidopsis thaliana under drought. New Phytol. 2009, 184:180-192.
22. Ghandilyan A., Ilk N., Hanhart C., Mbengue M., Barboza L., Schat H., Koorneef M., El-Lithy M., Vreugdenhil D., Reymond M., Aarts M.G.M. A strong effect of growth medium and organ type on the identification of QTLs for phytate and mineral concentrations in three Arabidopsis thaliana RIL populations. J. Exp. Bot. 2009, 60:1409-1425.
23. Haydon M.J., Cobbett C.S. Transporters of ligands for essential metal ions in plants. New Phytol. 2007, 174:499-506.
24. Hoagland D.R., Arnon D.I. The water-culture method for growing plants without soil. Calif. Agric. Exp. Stn. Circ. 1950, 347:1-39.
25. Ke W., Xiong Z.T., Chen S., Chen J. Effects of copper and mineral nutrition on growth, copper accumulation and mineral element uptake in two Rumex japonicus populations from a copper mine and an uncontaminated field sites. Environ. Exp. Bot. 2007, 59:59-67.
26. Klein M.A., Sekimoto H., Milner M.J., Kochian L.V. Investigation of heavy metal hyperaccumulation at the cellular level: development and characterization of Thlaspi caerulescens suspension cell lines. Plant Physiol. 2008, 147:2006-2016.
27. Krzesłowska M. The cell wall in plant cell response to trace metals: polysaccharide remodeling and its role in defense strategy. Acta Physiol. Plant. 2011, 33:35-51.
28. Krzesłowska M., Lenartowska M., Samardakiewicz S., Bilski H., Wozny A. Lead deposited in the cell wall of Funaria hygrometrica protonemata is not stable - a remobilization can occur. Environ. Pollut. 2010, 158:325-338.
29. Lux A., Martinka M., Vaculík M., White P.J. Root responses to cadmium in the rhizosphere: a review. J Exp. Bot. 2011, 62(1):21-37.
30. Marschner H. Mineral Nutrition of Higher Plants 1995, Academic Press, London.
31. Mascaro I., Benvenuti M., Corsini F., Costagliola P., Lattanzi P., Parrini P., Tanelli G. Mine wastes at the polymetallic deposit of Fenice Capanne (Southern Tuscany, Italy). Mineralogy, geochemistry and environmental impact. Environ. Geol. 2001, 41:417-429.
32. van de Mortel J.E., Almar Villanueva L., Schat H., Kwekkeboom J., Coughlan S., Moerland P.D., Ver Loren van Themaat E., Koornneef M., Aarts M.G.M. Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. Plant Physiol. 2006, 142:1127-1147.
33. van de Mortel J.E., Schat H., Moerland P.D., Ver Loren van Themaat E., van der Ent S., Blankestijn H., Ghandilyan A., Tsitsiani S., Aarts M.G.M. Expression differences for genes involved in lignin, glutathione and sulphate metabolism in response to cadmium in Arabidopsis thaliana and the related Zn/Cd hyperaccumulator Thlaspi caerulescens. Plant Cell Environ. 2008, 31:301-324.
34. + from Arabidopsis seedlings is mediated by ion channels and coupled to citrate efflux. Plant Physiol. 1999, 121:1375-1382.
35. Palma J.M., Gomez M., Yañez J., del Rio L.A. Increased levels of peroxisomal active oxygen-related enzymes in copper-tolerant pea plants. Plant Physiol. 1987, 85:570-574.
36. Pawlowsky-Glahn V., Egozcue J.J. Compositional data and their analysis: an introduction. Compositional data Analysis in the Geosciences: from Theory to Practice, Geological Society 2006, 26:1-10. Special Publications, London.
37. Pignattelli S., Colzi I., Buccianti A., Cecchi L., Arnetoli M., Monnanni R., Gabbrielli R., Gonnelli C. Exploring element accumulation patterns of a metal excluder plant naturally colonizing a highly contaminated soil. J. Hazard. Mater. 2012, 227:362-369.
38. Pilon M., Cohu C.M., Ravet K., Abdel-Ghany S.E., Gaymard F. Essential transition metal homeostasis in plants. Curr. Opin. Plant Biol. 2009, 12:347-357.
39. Prinzenberg A.E., Barbier H., Salt D.E., Stich B., Reymond M. Relationships between growth, growth response to nutrient supply, and ion content using a recombinant inbred line population in Arabidopsis. Plant Physiol. 2010, 154:1361-1371.
40. Salt D.E., Baxter I., Lahner B. Ionomics and the study of the plant ionome. Annu. Rev. Plant. Biol. 2008, 59:709-733.
41. Sankaran R.P., Huguet T., Grusak M.A. Identification of QTL affecting seed mineral concentrations and content in the model legume Medicago truncatula. Theor. Appl. Genet. 2009, 119:241-253.
42. Schiavon M., Zhang L., Abdel-Ghan S.E., Pilon M., Malagoli M., Pilon-Smits E.A.H. Variation in copper tolerance in Arabidopsis thaliana accessions Columbia, Landsberg erecta and Wassilewskija. Physiol. Plant 2007, 129:342-350.
43. Schreiber L., Hartmann K., Skrabs M., Zeier J. Apoplastic barriers in roots: chemical composition of endodermal and hypodermal cell walls. J. Exp. Bot. 1999, 50:1267-1280.
44. Sivaguru M., Fujiwara T., Samaj J., Baluska F., Yang Z., Osawa H., Maeda T., Mori T., Volkmann D., Matsumoto H. Al induced 1- to 3-b-D-glucan inhibits cell-to-cell trafficking of molecules through plasmodesmata. A new mechanism of Al toxicity in plants. Plant Physiol. 2000, 124:991-1005.
45. Sgherri C., Cosi E., Navari-Izzo F. Phenols and antioxidative status of Raphanus sativus grown in copper excess. Physiol. Plant. 2003, 118:21-28.
46. Tronconi E. Tolleranza ed assorbimento dei metalli pesanti in popolazioni di Silene paradoxa L. Bachelor Thesis 2006, Università di Firenze, Italy.
47. Vaculík M., Lux A., Luxova M., Tanimoto E., Lichtscheidle I. Silicon mitigates cadmium inhibitory effects in young maize plants. Environ. Exp. Bot. 2009, 67:52-58.
48. Van Hoff N.A.L.M., Koevoets P.L.M., Hakvoort H.W.J., Ten Bookum W.M., Schat H., Verkleij J.A.C., Ernst W.H.O. Enhanced ATP-dependent copper efflux across the root cell plasma membrane in copper-tolerant Silene vulgaris. Plant Physiol. 2001, 113:225-232.
49. Vreugdenhil D., Aarts M.G.M., Koornneef M., Nelissen H., Ernst W.H.O. Natural variation and QTL analysis for cationic mineral content in seeds of Arabidopsis thaliana. Plant Cell Environ. 2004, 27:828-839.
50. Welch R.M. Micronutrient nutrition of plants. Crit. Rev. Plant Sci. 1995, 14:49-82.
51. Zelko I., Lux A. Effect of cadmium on Karwinskia humboldtiana roots. Biologia 2004, 59:205-209.