-
1
-
-
84878516155
-
A pragmatic approach to HIV-1 drug resistance determination in resource-limited settings by use of a novel genotyping assay targeting the reverse transcriptase-encoding region only
-
Aitken S., Bronze M., Wallis C., Stuyver L., Steegen K., Balinda S., Kityo C., Stevens W., Rinke de Wit T.F., Schuurman R. A pragmatic approach to HIV-1 drug resistance determination in resource-limited settings by use of a novel genotyping assay targeting the reverse transcriptase-encoding region only. Journal of Clinical Microbiology 2013, 51:1757-1761.
-
(2013)
Journal of Clinical Microbiology
, vol.51
, pp. 1757-1761
-
-
Aitken, S.1
Bronze, M.2
Wallis, C.3
Stuyver, L.4
Steegen, K.5
Balinda, S.6
Kityo, C.7
Stevens, W.8
Rinke de Wit, T.F.9
Schuurman, R.10
-
2
-
-
84878516947
-
Development and evaluation of an affordable real-time qualitative assay for determining HIV-1 virological failure in plasma and dried blood spots
-
Aitken S., Kliphuis A., Bronze M., Wallis C., Kityo C., Balinda S., Stevens W., Spieker N., de Oliveira T., Rinke de Wit T.F., Schuurman R. Development and evaluation of an affordable real-time qualitative assay for determining HIV-1 virological failure in plasma and dried blood spots. Journal of Clinical Microbiology 2013, 51(June):1899-1905.
-
(2013)
Journal of Clinical Microbiology
, vol.51
, Issue.JUNE
, pp. 1899-1905
-
-
Aitken, S.1
Kliphuis, A.2
Bronze, M.3
Wallis, C.4
Kityo, C.5
Balinda, S.6
Stevens, W.7
Spieker, N.8
de Oliveira, T.9
Rinke de Wit, T.F.10
Schuurman, R.11
-
3
-
-
84887607696
-
Evaluation of a viral failure assay using Dried Blood spots in three clinical settings in Uganda
-
Balinda S., Ondoa P., Kliphuis A., Egau I., Bronze M., Kasambula L., Obuku E., Schuurman R., Spieker N., Rinke de Wit T.F., Kityo C. Evaluation of a viral failure assay using Dried Blood spots in three clinical settings in Uganda. African Society of Laboratory Medicine International Conference 2012.
-
(2012)
African Society of Laboratory Medicine International Conference
-
-
Balinda, S.1
Ondoa, P.2
Kliphuis, A.3
Egau, I.4
Bronze, M.5
Kasambula, L.6
Obuku, E.7
Schuurman, R.8
Spieker, N.9
Rinke de Wit, T.F.10
Kityo, C.11
-
4
-
-
76849108626
-
Virological follow-up of adult patients in antiretroviral treatment programmes in sub-Saharan Africa? A systematic review
-
Barth R., Loeff Mfs., Schuurman R., Hoepelman A., Wensing A. Virological follow-up of adult patients in antiretroviral treatment programmes in sub-Saharan Africa? A systematic review. Lancet Infectious Diseases 2010, 10:155-166. 10.1016/S1473-3099(09)70328-7.
-
(2010)
Lancet Infectious Diseases
, vol.10
, pp. 155-166
-
-
Barth, R.1
Loeff, M.2
Schuurman, R.3
Hoepelman, A.4
Wensing, A.5
-
5
-
-
84908219488
-
Statistical methods for assessing agreement between two methods of clinical measurement
-
Bland J., Altman D. Statistical methods for assessing agreement between two methods of clinical measurement. Lancet 1986, 8:307-310.
-
(1986)
Lancet
, vol.8
, pp. 307-310
-
-
Bland, J.1
Altman, D.2
-
7
-
-
84864944623
-
Frequent emergence of N348I in HIV-1 subtype C reverse transcriptase with faialure of inital therapy reduces susceptibility to reverse-transcriptase inhibitors\
-
Brehm J., Koontz D., Wallis C., Shutt K., Sanne I., Wood R., McIntyre J., Stevens W.S., Sluis-Cremer N., Mellors J.W. Frequent emergence of N348I in HIV-1 subtype C reverse transcriptase with faialure of inital therapy reduces susceptibility to reverse-transcriptase inhibitors\. Clinical Infectious Diseases 2012, 55:737-745.
-
(2012)
Clinical Infectious Diseases
, vol.55
, pp. 737-745
-
-
Brehm, J.1
Koontz, D.2
Wallis, C.3
Shutt, K.4
Sanne, I.5
Wood, R.6
McIntyre, J.7
Stevens, W.S.8
Sluis-Cremer, N.9
Mellors, J.W.10
-
8
-
-
84873845926
-
Guidelines: the 2012 southern African ARV drug resistance testing guidelines
-
Conradie F., Wilson D., Basson A., De Oliveira T., Hunt G., Joel D., Papathanasopoulos M., Preiser W., Klausner J., Spencer D., Stevens W., Venter F., van Vuuren C., Levin L., Meintjes G., Orrell C., Sunpath H., Rossouw T., van Zyl G. Guidelines: the 2012 southern African ARV drug resistance testing guidelines. Southern African Journal of HIV Medicine 2012, 13:162-167.
-
(2012)
Southern African Journal of HIV Medicine
, vol.13
, pp. 162-167
-
-
Conradie, F.1
Wilson, D.2
Basson, A.3
De Oliveira, T.4
Hunt, G.5
Joel, D.6
Papathanasopoulos, M.7
Preiser, W.8
Klausner, J.9
Spencer, D.10
Stevens, W.11
Venter, F.12
van Vuuren, C.13
Levin, L.14
Meintjes, G.15
Orrell, C.16
Sunpath, H.17
Rossouw, T.18
van Zyl, G.19
-
9
-
-
70349742777
-
® v1.5 using specimens from East Africa
-
® v1.5 using specimens from East Africa. Journal of virological methods 2009, 162(1-2):218-222.
-
(2009)
Journal of virological methods
, vol.162
, Issue.1-2
, pp. 218-222
-
-
Crump, J.1
Scotte, L.2
Msuyac, M.3
Morrisseya, A.4
Kimaroc, E.5
Shaoc, J.6
Stevens, W.7
-
10
-
-
77954348426
-
Viremia and drug resistance among HIV-1 patients on antiretroviral treatment: a cross-sectional study in Soweto, South Africa
-
El-Khatib Z., Ekstrom A., Ledwaba J., Mohapi L., Laher F., Karstaedt A., Charalambous S., Petzold M., Katzenstein D., Morris L. Viremia and drug resistance among HIV-1 patients on antiretroviral treatment: a cross-sectional study in Soweto, South Africa. AIDS 2010, 24(July):1679-1687.
-
(2010)
AIDS
, vol.24
, Issue.JULY
, pp. 1679-1687
-
-
El-Khatib, Z.1
Ekstrom, A.2
Ledwaba, J.3
Mohapi, L.4
Laher, F.5
Karstaedt, A.6
Charalambous, S.7
Petzold, M.8
Katzenstein, D.9
Morris, L.10
-
11
-
-
80053290835
-
Cohort Profile: the PharmAccess African (PASER-M) and the TREAT Asia (TASER-M) monitoring studies to evaluate resistance-HIV drug resistance in sub-Saharan Africa and the Asia-Pacific
-
(Epub ahead of print), on behalf of the P.A.(PASER) and T.A.(TASER) S.to E.R.
-
Hamers R., Oyomopito R., Kityo C., Phanuphak P., Siwale M., Sungkanuparph S., Conradie F., Kumarasamy N., Botes M.E., Sirisanthana T., Abdallah S., Li P.C., Ngorima N., Kantipong P., Osibogun A., Lee C.K., Stevens W.S., Kamarulzaman A., Derdelinckx I., Chen Y.M., Schuurman R., Vugt M.V., Rinke de Wit T.F., on behalf of the P.A.(PASER) and T.A.(TASER) S.to E.R. Cohort Profile: the PharmAccess African (PASER-M) and the TREAT Asia (TASER-M) monitoring studies to evaluate resistance-HIV drug resistance in sub-Saharan Africa and the Asia-Pacific. International Journal of Epidemiology 2011, (Epub ahead of print).
-
(2011)
International Journal of Epidemiology
-
-
Hamers, R.1
Oyomopito, R.2
Kityo, C.3
Phanuphak, P.4
Siwale, M.5
Sungkanuparph, S.6
Conradie, F.7
Kumarasamy, N.8
Botes, M.E.9
Sirisanthana, T.10
Abdallah, S.11
Li, P.C.12
Ngorima, N.13
Kantipong, P.14
Osibogun, A.15
Lee, C.K.16
Stevens, W.S.17
Kamarulzaman, A.18
Derdelinckx, I.19
Chen, Y.M.20
Schuurman, R.21
Vugt, M.V.22
Rinke de Wit, T.F.23
more..
-
12
-
-
33744953256
-
Comparative performance of the Amplicor HIV-1 Monitor assay versus NucliSens EasyQ in HIV subtype C-infected patients
-
Martin D., Gottesman B., Grossman Z., Lorber M., Levi I., Shitrit P., Katzir M., Gottesman G., Chowers M. Comparative performance of the Amplicor HIV-1 Monitor assay versus NucliSens EasyQ in HIV subtype C-infected patients. Journal of Medical Virology 2006, 78:883-887.
-
(2006)
Journal of Medical Virology
, vol.78
, pp. 883-887
-
-
Martin, D.1
Gottesman, B.2
Grossman, Z.3
Lorber, M.4
Levi, I.5
Shitrit, P.6
Katzir, M.7
Gottesman, G.8
Chowers, M.9
-
13
-
-
36348939264
-
High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients
-
Masciotra S., Garrido C., Youngpairoj A., McNulty A., Zahonero N., Corral A., Heneine W., de Mendoza C., García-Lerma J.G. High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients. AIDS 2007, 21(November):2503-2511.
-
(2007)
AIDS
, vol.21
, Issue.NOVEMBER
, pp. 2503-2511
-
-
Masciotra, S.1
Garrido, C.2
Youngpairoj, A.3
McNulty, A.4
Zahonero, N.5
Corral, A.6
Heneine, W.7
de Mendoza, C.8
García-Lerma, J.G.9
-
14
-
-
77954755249
-
Effect of storage conditions of dried plasma and blood spots on HIV-1 RNA quantification and PCR amplification for drug resistance genotyping
-
Monleau M., Butel C., Delaport E., Boillot F., Peeters M. Effect of storage conditions of dried plasma and blood spots on HIV-1 RNA quantification and PCR amplification for drug resistance genotyping. Journal of Antimicrobial Chemotherapy 2010, 65:1562-1566.
-
(2010)
Journal of Antimicrobial Chemotherapy
, vol.65
, pp. 1562-1566
-
-
Monleau, M.1
Butel, C.2
Delaport, E.3
Boillot, F.4
Peeters, M.5
-
16
-
-
0037250521
-
Human immunodeficiency virus reverse transcriptase and protease sequence database
-
Rhee S.-J., Gonzales M., Kantor R., Betts B., Ravela J., Shafer R. Human immunodeficiency virus reverse transcriptase and protease sequence database. Nucleic Acids Research 2003, 31:298-303.
-
(2003)
Nucleic Acids Research
, vol.31
, pp. 298-303
-
-
Rhee, S.-J.1
Gonzales, M.2
Kantor, R.3
Betts, B.4
Ravela, J.5
Shafer, R.6
-
17
-
-
70349644863
-
Performance of the New Roche Cobas AmpliPrep-Cobas TaqMan Version 2.0 human immunodeficiency virus type 1 assay
-
Scott L., Carmona S., Stevens W. Performance of the New Roche Cobas AmpliPrep-Cobas TaqMan Version 2.0 human immunodeficiency virus type 1 assay. Journal of Clinical Microbiology 2009, 47:3400-3402.
-
(2009)
Journal of Clinical Microbiology
, vol.47
, pp. 3400-3402
-
-
Scott, L.1
Carmona, S.2
Stevens, W.3
-
19
-
-
67650021214
-
Evaluation of the Abbott m2000 RealTime human immunodeficiency virus type 1 (HIV-1) assay for HIV load monitoring in South Africa compared to the Roche Cobas AmpliPrep-Cobas Amplicor, Roche Cobas AmpliPrep-Cobas TaqMan HIV-1, and BioMerieux NucliSENS Easy
-
Scott L., Noble L., Moloi J., Erasmus L., Venter W., Stevens W. Evaluation of the Abbott m2000 RealTime human immunodeficiency virus type 1 (HIV-1) assay for HIV load monitoring in South Africa compared to the Roche Cobas AmpliPrep-Cobas Amplicor, Roche Cobas AmpliPrep-Cobas TaqMan HIV-1, and BioMerieux NucliSENS Easy. Journal of Clinical Microbiology 2009, 47:2209-2217.
-
(2009)
Journal of Clinical Microbiology
, vol.47
, pp. 2209-2217
-
-
Scott, L.1
Noble, L.2
Moloi, J.3
Erasmus, L.4
Venter, W.5
Stevens, W.6
-
20
-
-
84861885800
-
Automated sequence analysis and editing software for HIV drug resistance testing
-
Struck D., Wallis C., Denisov G., Lambert C., Servais J., Viana R., Letsoalo E., Bronze M., Aitken S.C., Schuurman R., Stevens W., Schmit J.C., Rinke de Wit T., Perez Bercoff D. Automated sequence analysis and editing software for HIV drug resistance testing. Journal of Clinical Virology 2012, 54(May):30-35.
-
(2012)
Journal of Clinical Virology
, vol.54
, Issue.MAY
, pp. 30-35
-
-
Struck, D.1
Wallis, C.2
Denisov, G.3
Lambert, C.4
Servais, J.5
Viana, R.6
Letsoalo, E.7
Bronze, M.8
Aitken, S.C.9
Schuurman, R.10
Stevens, W.11
Schmit, J.C.12
Rinke de Wit, T.13
Perez Bercoff, D.14
-
21
-
-
79952440934
-
Low lopinavir plasma or hair concentrations explain second-line protease inhibitor failures in a resource-limited setting
-
Van Zyl G., Van Mens T., McIlleron H., Zeier M., Nachega J., Decloedt E., Malavazzi C., Smith P., Huang Y., van der Merwe L., Gandhi M., Maartens G. Low lopinavir plasma or hair concentrations explain second-line protease inhibitor failures in a resource-limited setting. Journal of Acquired Immune Deficiency Syndromes 2011, 56(April):333-339.
-
(2011)
Journal of Acquired Immune Deficiency Syndromes
, vol.56
, Issue.APRIL
, pp. 333-339
-
-
Van Zyl, G.1
Van Mens, T.2
McIlleron, H.3
Zeier, M.4
Nachega, J.5
Decloedt, E.6
Malavazzi, C.7
Smith, P.8
Huang, Y.9
van der Merwe, L.10
Gandhi, M.11
Maartens, G.12
-
22
-
-
84858135854
-
Protease inhibitor resistance is uncommon in HIV-1 subtype C infected patients on failing second-line lopinavir/r-Containing antiretroviral therapy in South Africa
-
Wallis C.L., Mellors J.W., Venter W.D.F., Sanne I., Stevens W. Protease inhibitor resistance is uncommon in HIV-1 subtype C infected patients on failing second-line lopinavir/r-Containing antiretroviral therapy in South Africa. AIDS Research and Treatment 2011, 769627. 10.1155/2011/769627.
-
(2011)
AIDS Research and Treatment
, pp. 769627
-
-
Wallis, C.L.1
Mellors, J.W.2
Venter, W.D.F.3
Sanne, I.4
Stevens, W.5
-
23
-
-
73249142514
-
Affordable in-house antiretroviral drug resistance assay with good performance in non-subtype B HIV-1
-
Wallis C.L., Papathanasopoulos M.A., Lakhi S., Karita E., Kaleebu P., Sanders E., Anzala O., Bekker L.G., Stevens G., de Wit T.F., Stevens W. Affordable in-house antiretroviral drug resistance assay with good performance in non-subtype B HIV-1. Journal of Virological Methods 2010, 163:505-508. 10.1016/j.jviromet.2009.11.011.
-
(2010)
Journal of Virological Methods
, vol.163
, pp. 505-508
-
-
Wallis, C.L.1
Papathanasopoulos, M.A.2
Lakhi, S.3
Karita, E.4
Kaleebu, P.5
Sanders, E.6
Anzala, O.7
Bekker, L.G.8
Stevens, G.9
de Wit, T.F.10
Stevens, W.11
-
24
-
-
79960082310
-
-
World Health Organization, Geneva, Retrieved December 19, 2012, from: (accessed 01.07.11)
-
WHO Antiretroviral Therapy for HIV Infection in Adults and Adolescents: Recommendations for a Public Health Approach, 2010 Revision 2010, World Health Organization, Geneva, Retrieved December 19, 2012, from: http://whqlibdoc.who.int/publications/2010/9789241599764_eng.pdf (accessed 01.07.11).
-
(2010)
WHO Antiretroviral Therapy for HIV Infection in Adults and Adolescents: Recommendations for a Public Health Approach, 2010 Revision
-
-
|