메뉴 건너뛰기




Volumn 54, Issue 4, 2013, Pages 381-386

Prediction of eye color in the slovenian population using the irisPlex SNPs

Author keywords

[No Author keywords available]

Indexed keywords

DNA; HERC2 PROTEIN; INTERFERON REGULATORY FACTOR 4; OCA2 PROTEIN; SLC45A2 PROTEIN; UNCLASSIFIED DRUG;

EID: 84884937354     PISSN: 03539504     EISSN: 13328166     Source Type: Journal    
DOI: 10.3325/cmj.2013.54.381     Document Type: Article
Times cited : (40)

References (29)
  • 1
    • 79951796014 scopus 로고    scopus 로고
    • Model-based prediction of human hair color using DNA variants
    • Medline:21197618 doi:10.1007/s00439-010-0939-8
    • Branicki W, Liu F, van Duijn K, Draus-Barini J, Pospiech E, Walsh S, et al. Model-based prediction of human hair color using DNA variants. Hum Genet. 2011;129:443-54. Medline:21197618 doi:10.1007/s00439-010-0939-8
    • (2011) Hum Genet. , vol.129 , pp. 443-54
    • Branicki, W.1    Liu, F.2    van Duijn, K.3    Draus-Barini, J.4    Pospiech, E.5    Walsh, S.6
  • 3
    • 44849091227 scopus 로고    scopus 로고
    • A genomewide association study identifies novel alleles associated with hair color and skin pigmentation
    • Medline:18483556 doi:10.1371/journal.pgen.1000074
    • H an J, Kraft P, Nan H, Guo Q, Chen C, Qureshi A, et al. A genomewide association study identifies novel alleles associated with hair color and skin pigmentation. PLoS Genet. 2008;4:e1000074. Medline:18483556 doi:10.1371/journal.pgen.1000074
    • (2008) PLoS Genet. , vol.4
    • Han, J.1    Kraft, P.2    Nan, H.3    Guo, Q.4    Chen, C.5    Qureshi, A.6
  • 6
    • 84856786912 scopus 로고    scopus 로고
    • Verification of eye and skin color predictors in various populations
    • Medline:22284939 doi:10.1016/j. legalmed.2011.12.005
    • Pneuman A, Budimlija ZM, Caragine T, Prinz M, Wurmbach E. Verification of eye and skin color predictors in various populations. Leg Med (Tokyo). 2012;14:78-83. Medline:22284939 doi:10.1016/j. legalmed.2011.12.005
    • (2012) Leg Med (Tokyo). , vol.14 , pp. 78-83
    • Pneuman, A.1    Budimlija, Z.M.2    Caragine, T.3    Prinz, M.4    Wurmbach, E.5
  • 7
    • 84863487241 scopus 로고    scopus 로고
    • Prediction of eye color from genetic data using Bayesian approach
    • Medline:22372960 doi:10.1111/j.1556-4029.2012.02077.x
    • Pospiech E, Draus-Barini J, Kupiec T, Wojas-Pelc A, Branicki W. Prediction of eye color from genetic data using Bayesian approach. J Forensic Sci. 2012;57:880-6. Medline:22372960 doi:10.1111/j.1556-4029.2012.02077.x
    • (2012) J Forensic Sci. , vol.57 , pp. 880-6
    • Pospiech, E.1    Draus-Barini, J.2    Kupiec, T.3    Wojas-Pelc, A.4    Branicki, W.5
  • 9
    • 80052267479 scopus 로고    scopus 로고
    • Prediction of eye color and skin color in diverse populations using seven SNPs
    • Medline:21050833 doi:10.1016/j.fsigen.2010.10.005
    • S pichenok O, Budimlija ZM, Mitchell AA, Jenny A, Kovacevic L, Marjanovic D, et al. Prediction of eye color and skin color in diverse populations using seven SNPs. Forensic Sci Int Genet. 2011;5:472-8. Medline:21050833 doi:10.1016/j.fsigen.2010.10.005
    • (2011) Forensic Sci Int Genet. , vol.5 , pp. 472-8
    • Spichenok, O.1    Budimlija, Z.M.2    Mitchell, A.A.3    Jenny, A.4    Kovacevic, L.5    Marjanovic, D.6
  • 10
    • 36549071998 scopus 로고    scopus 로고
    • Genetic determination of hair, eye and skin pigmentation in Europeans
    • Medline:17952075 doi:10.1038/ng.2007.13
    • S ulem P, Gudbjartsson DF, Stacey SN, Helgason A, Rafnar T, Magnusson KP, et al. Genetic determination of hair, eye and skin pigmentation in Europeans. Nat Genet. 2007;39:1443-52. Medline:17952075 doi:10.1038/ng.2007.13
    • (2007) Nat Genet. , vol.39 , pp. 1443-52
    • Sulem, P.1    Gudbjartsson, D.F.2    Stacey, S.N.3    Helgason, A.4    Rafnar, T.5    Magnusson, K.P.6
  • 11
    • 45549095745 scopus 로고    scopus 로고
    • Two newly idnetified genetic determinants of pigmentation in Europeans
    • Medline:18488028 doi:10.1038/ng.160
    • S ulem P, Gudbjartsson DF, Stacey SN, Helgason A, Rafnar T, Jakobsdottir M, et al. Two newly idnetified genetic determinants of pigmentation in Europeans. Nat Genet. 2008;40:835-7. Medline:18488028 doi:10.1038/ng.160
    • (2008) Nat Genet. , vol.40 , pp. 835-7
    • Sulem, P.1    Gudbjartsson, D.F.2    Stacey, S.N.3    Helgason, A.4    Rafnar, T.5    Jakobsdottir, M.6
  • 12
    • 80052272794 scopus 로고    scopus 로고
    • Developmental validation of the IrisPlex system: determination of blue and brown iris colour for forensic intelligence
    • Medline:20947461 doi:10.1016/j. fsigen.2010.09.008
    • Walsh S, Lindenbergh A, Zuniga SB, Sijen T, de Knijff P, Kayser M, et al. Developmental validation of the IrisPlex system: determination of blue and brown iris colour for forensic intelligence. Forensic Sci Int Genet. 2011;5:464-71. Medline:20947461 doi:10.1016/j. fsigen.2010.09.008
    • (2011) Forensic Sci Int Genet. , vol.5 , pp. 464-71
    • Walsh, S.1    Lindenbergh, A.2    Zuniga, S.B.3    Sijen, T.4    de Knijff, P.5    Kayser, M.6
  • 14
    • 84858446560 scopus 로고    scopus 로고
    • DNA-based eye colour prediction across Europe with the IrisPlex system
    • Medline:21813346 doi:10.1016/j.fsigen.2011.07.009
    • Walsh S, Wollstein A, Liu F, Chakravarthy U, Rahu M, Seland JH, et al. DNA-based eye colour prediction across Europe with the IrisPlex system. Forensic Sci Int Genet. 2012;6:330-40. Medline:21813346 doi:10.1016/j.fsigen.2011.07.009
    • (2012) Forensic Sci Int Genet. , vol.6 , pp. 330-40
    • Walsh, S.1    Wollstein, A.2    Liu, F.3    Chakravarthy, U.4    Rahu, M.5    Seland, J.H.6
  • 15
    • 0035904403 scopus 로고    scopus 로고
    • Human pigmentation genes: identification, structure and consequences of polymorphic variation
    • Medline:11602344 doi:10.1016/ S0378-1119(01)00694-1
    • S turm RA , Teasdale RD, Box NF. Human pigmentation genes: identification, structure and consequences of polymorphic variation. Gene. 2001;277:49-62. Medline:11602344 doi:10.1016/ S0378-1119(01)00694-1
    • (2001) Gene. , vol.277 , pp. 49-62
    • Sturm, R.A.1    Teasdale, R.D.2    Box, N.F.3
  • 16
    • 13644260560 scopus 로고    scopus 로고
    • Genetic disorders of pigmentation
    • Medline:15708290 doi:10.1016/j.clindermatol.2004.09.013
    • Passeron T, Mantoux F, Ortonne J. Genetic disorders of pigmentation. Clin Dermatol. 2005;23:56-67. Medline:15708290 doi:10.1016/j.clindermatol.2004.09.013
    • (2005) Clin Dermatol. , vol.23 , pp. 56-67
    • Passeron, T.1    Mantoux, F.2    Ortonne, J.3
  • 17
    • 84869497281 scopus 로고    scopus 로고
    • The HIrisPlex system for simultaneous prediction of hair and eye colour from DNA
    • Medline:22917817 doi:10.1016/j.fsigen.2012.07.005
    • Walsh S, Liu F, Wollstein A, Kovatsi L, Ralf A, Kosiniak-Kamysz A, et al. The HIrisPlex system for simultaneous prediction of hair and eye colour from DNA. Forensic Sci Int Genet. 2013;7:98-115. Medline:22917817 doi:10.1016/j.fsigen.2012.07.005
    • (2013) Forensic Sci Int Genet. , vol.7 , pp. 98-115
    • Walsh, S.1    Liu, F.2    Wollstein, A.3    Kovatsi, L.4    Ralf, A.5    Kosiniak-Kamysz, A.6
  • 18
    • 39549097952 scopus 로고    scopus 로고
    • Blue eye color in humans may be caused by a perfectly associated founder mutation in a regulatory element located within the HERC2 gene inhibiting OCA2 expression
    • Medline:18172690 doi:10.1007/s00439-007- 0460-x
    • Eiberg H, Troelsen J, Nielsen M, Mukkelsen A, Mengel-From J, Kjaer KW, et al. Blue eye color in humans may be caused by a perfectly associated founder mutation in a regulatory element located within the HERC2 gene inhibiting OCA2 expression. Hum Genet. 2008;123:177-87. Medline:18172690 doi:10.1007/s00439-007- 0460-x
    • (2008) Hum Genet. , vol.123 , pp. 177-87
    • Eiberg, H.1    Troelsen, J.2    Nielsen, M.3    Mukkelsen, A.4    Mengel-From, J.5    Kjaer, K.W.6
  • 19
    • 84857192750 scopus 로고    scopus 로고
    • HERC2 rs12913832 modulates human pigmentation by attenuating chromatin-loop formation between a long-range enhancer and the OCA2 promoter
    • Medline:22234890 doi:10.1101/gr.128652.111
    • Visser M, Kayser M, Palstra RJ. HERC2 rs12913832 modulates human pigmentation by attenuating chromatin-loop formation between a long-range enhancer and the OCA2 promoter. Genome Res. 2012;22:446-55. Medline:22234890 doi:10.1101/gr.128652.111
    • (2012) Genome Res. , vol.22 , pp. 446-55
    • Visser, M.1    Kayser, M.2    Palstra, R.J.3
  • 20
    • 33845745755 scopus 로고    scopus 로고
    • Population differences of two coding SNPs in pigmentation-related genes SLC24A5 and SLC45A2
    • Medline:16847698 doi:10.1007/s00414-006- 0112-z
    • S oejima M, Koda Y. Population differences of two coding SNPs in pigmentation-related genes SLC24A5 and SLC45A2. Int J Legal Med. 2007;121:36-9. Medline:16847698 doi:10.1007/s00414-006- 0112-z
    • (2007) Int J Legal Med. , vol.121 , pp. 36-9
    • Soejima, M.1    Koda, Y.2
  • 21
    • 33846617194 scopus 로고    scopus 로고
    • A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation
    • Medline:17236130 doi:10.1086/510885
    • Duffy DL, Montgomery GW, Chen W, Zhao ZZ, Le L, James MR, et al. A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation. Am J Hum Genet. 2007;80:241-52. Medline:17236130 doi:10.1086/510885
    • (2007) Am J Hum Genet. , vol.80 , pp. 241-52
    • Duffy, D.L.1    Montgomery, G.W.2    Chen, W.3    Zhao, Z.Z.4    Le, L.5    James, M.R.6
  • 22
    • 60549085065 scopus 로고    scopus 로고
    • Interactions between HERC2, OCA2 and MC1R may influence human pigmentation phenotype
    • Medline:19208107 doi:10.1111/ j.1469-1809.2009.00504.x
    • Branicki W, Brudnik U, Wojas-Pelc A. Interactions between HERC2, OCA2 and MC1R may influence human pigmentation phenotype. Ann Hum Genet. 2009;73:160-70. Medline:19208107 doi:10.1111/ j.1469-1809.2009.00504.x
    • (2009) Ann Hum Genet. , vol.73 , pp. 160-70
    • Branicki, W.1    Brudnik, U.2    Wojas-Pelc, A.3
  • 23
    • 84891715877 scopus 로고    scopus 로고
    • SNP model development for the prediction of eye colour in New Zealand
    • Medline:23597786 doi:10.1016/j.fsigen.2013.03.005
    • A llwood JS, Harbison S. SNP model development for the prediction of eye colour in New Zealand. Forensic Sci Int Genet. 2013;7:444- 52. Medline:23597786 doi:10.1016/j.fsigen.2013.03.005
    • (2013) Forensic Sci Int Genet. , vol.7
    • Allwood, J.S.1    Harbison, S.2
  • 24
    • 84881496492 scopus 로고    scopus 로고
    • Improved eye- and skin-color prediction based on 8 SNPs
    • Medline:23771755 doi:10.3325/ cmj.2013.54.248
    • H art KL, Kimura SL, Mushailov V, Budimlija ZM, Prinz M, Wurmbach E. Improved eye- and skin-color prediction based on 8 SNPs. Croat Med J. 2013;54:248-56. Medline:23771755 doi:10.3325/ cmj.2013.54.248
    • (2013) Croat Med J. , vol.54 , pp. 248-56
    • Hart, K.L.1    Kimura, S.L.2    Mushailov, V.3    Budimlija, Z.M.4    Prinz, M.5    Wurmbach, E.6
  • 25
    • 0025923821 scopus 로고
    • Chelex 100 as a medium for simple extraction of DNA for PCR - based typing from forensic material
    • Medline:1867860
    • Walsh PS, Metzger DA, Higuchi R. Chelex 100 as a medium for simple extraction of DNA for PCR - based typing from forensic material. Biotechniques. 1991;10:506-13. Medline:1867860
    • (1991) Biotechniques. , vol.10 , pp. 506-13
    • Walsh, P.S.1    Metzger, D.A.2    Higuchi, R.3
  • 26
    • 84871879129 scopus 로고    scopus 로고
    • A single-nucleotide polymorphism (SNP) multiplex system: the association of five SNPs with human eye and hair color in the Slovenian population and comparison using a Bayesian network and logistic regression model
    • Medline:23100201 doi:10.3325/cmj.2012.53.401
    • Kastelic V, Drobnic K. A single-nucleotide polymorphism (SNP) multiplex system: the association of five SNPs with human eye and hair color in the Slovenian population and comparison using a Bayesian network and logistic regression model. Croat Med J. 2012;53:401-8. Medline:23100201 doi:10.3325/cmj.2012.53.401
    • (2012) Croat Med J. , vol.53 , pp. 401-8
    • Kastelic, V.1    Drobnic, K.2
  • 27
    • 79959627449 scopus 로고    scopus 로고
    • Genegene interactions contribute to eye color variation in humans
    • Medline:21471978 doi:10.1038/ jhg.2011.38
    • Pospiech E, Draus-Barini J, Kupiec T, Wojas-Pelc A, Branicki W. Genegene interactions contribute to eye color variation in humans. J Hum Genet. 2011;56:447-55. Medline:21471978 doi:10.1038/ jhg.2011.38
    • (2011) J Hum Genet. , vol.56 , pp. 447-55
    • Pospiech, E.1    Draus-Barini, J.2    Kupiec, T.3    Wojas-Pelc, A.4    Branicki, W.5
  • 28
    • 77953194221 scopus 로고    scopus 로고
    • Digital quantification of human eye colour highlights genetic association of three new loci
    • Medline:20463881 doi:10.1371/journal.pgen.1000934
    • L iu F, Wollstein A, Hysi PG, Ankra-Badu GA, Spector TD, Park D, et al. Digital quantification of human eye colour highlights genetic association of three new loci. PLoS Genet. 2010;6:e1000934. Medline:20463881 doi:10.1371/journal.pgen.1000934
    • (2010) PLoS Genet. , vol.6
    • Liu, F.1    Wollstein, A.2    Hysi, P.G.3    Ankra-Badu, G.A.4    Spector, T.D.5    Park, D.6
  • 29
    • 84879640256 scopus 로고    scopus 로고
    • Genetic analyses of the human eye colours using a novel objective method for eye colour classification
    • Medline:23948321 doi:10.1016/j.fsigen.2013.05.003
    • A ndersen JD, Johansen P, Harder S, Christoffersen SR, Delgado MC, Henriksen ST, et al. Genetic analyses of the human eye colours using a novel objective method for eye colour classification. Forensic Sci Int Genet. 2013;7:508-15. Medline:23948321 doi:10.1016/j.fsigen.2013.05.003
    • (2013) Forensic Sci Int Genet. , vol.7 , pp. 508-15
    • Andersen, J.D.1    Johansen, P.2    Harder, S.3    Christoffersen, S.R.4    Delgado, M.C.5    Henriksen, S.T.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.