Cucurbita spp. and Cucumis sativus enhance the dissipation of polychlorinated biphenyl congeners by stimulating soil microbial community development

Environmental Pollution

Volumn 184, Issue , 2014, Pages 306-312

  Qin, Hua ^a,b   Brookes, Philip C ^a   Xu, Jianming ^a  

^a ZHEJIANG UNIVERSITY   (China)

^b ZHEJIANG A F UNIVERSITY   (China)

Author keywords

Biodegradation; Congener profile; Cucurbit; Phospholipid fatty acids; Redundancy analysis

Indexed keywords

CONGENER PROFILES; CUCURBIT; PHOSPHOLIPID FATTY ACIDS; POLYCHLORINATED BIPHENYL (PCBS); POLYCHLORINATED BIPHENYL CONGENER; REDUNDANCY ANALYSIS; SOIL MICROBIAL COMMUNITY; SOIL MICROBIAL COMMUNITY STRUCTURE;

BACTERIA; BIODEGRADATION; DEGRADATION; FATTY ACIDS; GREENHOUSE EFFECT; MICROBIOLOGY; ORGANIC POLLUTANTS; PHOSPHOLIPIDS; REMEDIATION; SOIL POLLUTION; SOILS;

POLYCHLORINATED BIPHENYLS;

FATTY ACID; POLYCHLORINATED BIPHENYL;

BIODEGRADATION; DICOTYLEDON; DISSIPATION; FATTY ACID; MICROBIAL COMMUNITY; PCB; PERENNIAL PLANT; SOIL POLLUTION; SOIL REMEDIATION;

ARTICLE; BIODEGRADATION; CHEMICAL REACTION; COMMUNITY STRUCTURE; CONTROLLED STUDY; CUCUMBER; CUCUMIS; CUCURBITA MOSCHATA; CUCURBITA PEPO; DEGRADATION; DISSIPATION; ECOSYSTEM RESTORATION; ENVIRONMENTAL IMPACT; FUNGUS; GRAM NEGATIVE BACTERIUM; GREENHOUSE; MICROBIAL BIOMASS; NONHUMAN; SOIL ANALYSIS; SOIL MICROFLORA; SOIL POLLUTION; SQUASH;

BIODEGRADATION; CONGENER PROFILE; CUCURBIT; PHOSPHOLIPID FATTY ACIDS; REDUNDANCY ANALYSIS;

BACTERIA; BIODEGRADATION, ENVIRONMENTAL; CUCUMIS SATIVUS; CUCURBITA; FUNGI; MICROBIAL CONSORTIA; POLYCHLORINATED BIPHENYLS; SOIL; SOIL MICROBIOLOGY; SOIL POLLUTANTS;

EID: 84884863330     PISSN: 02697491     EISSN: 18736424     Source Type: Journal    
DOI: 10.1016/j.envpol.2013.09.006     Document Type: Article

References (55)

1. W.R. Abraham, B. Nogales, P.N. Golyshin, D.H. Pieper, and K.N. Timmis Polychlorinated biphenyl-degrading microbial communities in soils and sediments Curr. Opin. Microbiol. 5 2002 246 253 (Pubitemid 34614935)
2. B.V. Aken, P.A. Correa, and J.L. Schnoor Phytoremediation of polychlorinated biphenyls: new trends and promises Environ. Sci. Technol. 44 2009 2767 2776
3. T.C. Balser, and M.K. Firestone Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forest Biogeochemistry 73 2005 395 415 (Pubitemid 40747886)
4. E.A. Ben-David, E. Zaady, Y. Sher, and A. Nejidat Assessment of the spatial distribution of soil microbial communities in patchy arid and semi-arid landscapes of the Negev Desert using combined PLFA and DGGE analyses Fems Microbiol. Ecol. 76 2011 492 503
5. W.A. Berger, M.I. Mattina, and J.C. White Effect of hydrogen peroxide on the uptake of chlordane by Cucurbita pepo Plant Soil 360 2012 135 144
6. J. Borja, D.M. Taleon, J. Auresenia, and S. Gallardo Polychlorinated biphenyls and their biodegradation Process Biochem. 40 2005 1999 2013 (Pubitemid 40257024)
7. T. Chekol, L.R. Vough, and R.L. Chaney Phytoremediation of polychlorinated biphenyl-contaminated soils: the rhizosphere effect Environ. Int. 30 2004 799 804 (Pubitemid 39022736)
8. S. Chhikara, B. Paulose, J.C. White, and O.P. Dhankher Understanding the physiological and molecular mechanism of persistent organic pollutant uptake and detoxification in cucurbit species (zucchini and squash) Environ. Sci. Technol. 44 2010 7295 7301
9. P.A. Correa, L.S. Lin, C.L. Just, D.F. Hu, K.C. Hornbuckle, J.L. Schnoor, and B.V. Aken The effects of individual PCB congeners on the soil bacterial community structure and the abundance of biphenyl dioxygenase genes Environ. Int. 36 2010 901 906
10. M. Čvančarová, Z. Křesinová, A. Filipová, S. Covino, and T. Cajthaml Biodegradation of PCBs by ligninolytic fungi and characterization of the degradation products Chemosphere 88 2012 1317 1323
11. F.T. de Vries, E. Hoffland, N. van Eekeren, L. Brussaard, and J. Bloem Fungal/bacterial ratios in grasslands with contrasting nitrogen management Soil Biol. Biochem. 38 2006 2092 2103 (Pubitemid 44148675)
12. D. Dietrich, W.J. Hickey, and R. Lamar Degradation of 4, 4′-dichlorobiphenyl, 3, 3′, 4, 4'-tetrachlorobiphenyl, and 2, 2′, 4, 4′, 5, 5′-hexachlorobiphenyl by the white rot fungus Phanerochaete chrysosporium Appl. Environ. Microbiol. 61 1995 3904 3909
13. N. Ding, H.T. Guo, T. Hayat, Y.P. Wu, and J.M. Xu Microbial community structure changes during Aroclor 1242 degradation in the rhizosphere of ryegrass (Lolium multiflorum L.) Fems Microbiol. Ecol. 70 2009 305 314
14. N. Ding, T. Hayat, J. Wang, H.Z. Wang, X.M. Liu, and J.M. Xu Responses of microbial community in rhizosphere soils when ryegrass was subjected to stress from PCBs J. Soils Sedim. 118 2011 1355 1362
15. P.K. Donnelly, R.S. Hegde, and J.S. Fletcher Growth of PCB-degrading bacteria on compounds from photosynthetic plants Chemosphere 28 1994 981 988 (Pubitemid 24085398)
16. N. Fierer, J.P. Schimel, and P.A. Holden Variations in microbial community composition through two soil depth profiles Soil Biol. Biochem. 35 2003 167 176 (Pubitemid 36339470)
17. A. Frostegard, E. Baath, and A. Tunlio Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty acid analysis Soil Biol. Biochem. 25 1993 723 730 (Pubitemid 24412647)
18. K. Furukawa, and H. Fujihara Microbial degradation of polychlorinated biphenyls: biochemical and molecular features J. Biosci. Bioeng. 105 2008 433 449 (Pubitemid 351815022)
19. S.J. Greenwood, A. Rutter, and B.A. Zeeb The absorption and translocation of polychlorinated biphenyl congeners by Cucurbita pepo ssp pepo Environ. Sci. Technol. 45 2011 6511 6516
20. D.W. Hawker, and D.W. Connel Octanol-water partition coefficients of polychlorinated biphenyl congeners Environ. Sci. Technol. 22 1988 382 387 (Pubitemid 18097012)
21. M. Ionescu, K. Beranova, V. Dudkova, L. Kochankova, K. Demnerova, T. Macek, and M. Mackova Isolation and characterization of different plant associated bacteria and their potential to degrade polychlorinated biphenyls Int. Biodeterior. Biodegrad. 63 2009 667 672
22. M. Isleyen, P. Sevim, and J.C. White Accumulation of weathered p, p′-DDTs in hybridized Cucurbita pepo cultivars Environ. Toxicol. Chem. 31 2012 1699 1704
23. A. Kaur, A. Chaudhary, A. Kaur, R. Choudhary, and R. Kaushik Phospholipid fatty acid - a bioindicator of environment monitoring and assessment in soil ecosystem Curr. Sci. 89 2005 1103 1112 (Pubitemid 43169805)
24. M.B. Leigh, P. Prouzová, M. Macková, T. Macek, D.P. Nagle, and J.S. Fletcher Polychlorinated biphenyl (PCB)-degrading bacteria associated with trees in a PCB-contaminated site Appl. Environ. Microbiol. 72 2006 2331 2342
25. M.B. Leigh, V.H. Pellizari, O. Uhlik, R. Sutka, J. Rodrigues, N.E. Ostrom, J. Zhou, and J.M. Tiedje Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs) ISME J. 1 2007 134 148 (Pubitemid 46878156)
26. H.S. Li, L.Y. Liu, C.X. Lin, and S.R. Wang Plant uptake and in-soil degradation of PCB-5 under varying cropping conditions Chemosphere 84 2011 943 949
27. J.E. Low, M.L. Whitfield Aslund, A. Rutter, and B.A. Zeeb The effects of pruning and nodal adventitious roots on polychlorinated biphenyl uptake by Cucurbita pepo grown in field conditions Environ. Pollut. 159 2011 769 775
28. A.I. Lunney, A. Barbara, and K.J. Reimer Uptake of weathered DDT in vascular plants: potential for phytoremediation Environ. Sci. Technol. 38 2004 6147 6154 (Pubitemid 39491891)
29. M. Macková, B. Vrchotová, K. Francová, M. Sylvestre, M. Tomaniová, P. Lovecká, K. Demnerová, and T. Macek Biotransformation of PCBs by plants and bacteria-consequences of plant-microbe interactions Eur. J. Soil Biol. 43 2007 233 241 (Pubitemid 46898880)
30. M.J.I. Mattina, J. White, B. Eitzer, and W. Iannucci-Berger Cycling of weathered chlordane residues in the environment: compositional and chiral profiles in contiguous soil, vegetation, and air compartments Environ. Toxicol. Chem. 21 2002 281 288 (Pubitemid 34074034)
31. M.I. Mattina, B.D. Eitzer, W. Iannucci-Berger, W.Y. Lee, and J.C. White Plant uptake and translocation of highly weathered, soil-bound technical chlordane residues: data from field and rhizotron studies Environ. Toxicol. Chem. 23 2004 2756 2762 (Pubitemid 39360209)
32. R.E. Meggo, J.L. Schnoor, and D. Hu Dechlorination of PCBs in the rhizosphere of switchgrass and poplar Environ. Pollut. 178 2013 312 321
33. M. Megharaj, D. Kantachote, I. Singleton, and R. Naidu Effects of long-term contamination of DDT on soil microflora with special reference to soil algae and algal transformation of DDT Environ. Pollut. 109 2000 35 42 (Pubitemid 30163040)
34. R. Mehmannavaz, S.O. Prasher, and D. Ahmad Rhizospheric effects of alfalfa on biotransformation of polychlorinated biphenyls in a contaminated soil augmented with Sinorhizobium meliloti Process Biochem. 37 2002 955 963 (Pubitemid 34160245)
35. K. Narasimhan, C. Basheer, V.B. Bajic, and S. Swarup Enhancement of plant-microbe interactions using a rhizosphere metabolomics-driven approach and its application in the removal of polychlorinated biphenyls Plant Physiol. 132 2003 146 153 (Pubitemid 36599272)
36. M. Pramanik, M. Nagai, T. Asao, and Y. Matsui Effects of temperature and photoperiod on phytotoxic root exudates of cucumber (Cucumis sativus) in hydroponic culture J. Chem. Ecol. 26 2000 1953 1967
37. P. Richardson, D. Baker, and L. Ho The chemical composition of cucurbit vascular exudates J. Exp. Bot. 33 1982 1239 1247
38. J.M. Saavedra, F. Acevedo, M. González, and M. Seeger Mineralization of PCBs by the genetically modified strain Cupriavidus necator JMS34 and its application for bioremediation of PCBs in soil Appl. Microbiol. Biotechnol. 87 2010 1543 1554
39. S.Y. Seah, G. Labbé, S. Nerdinger, M.R. Johnson, V. Snieckus, and L.D. Eltis Identification of a serine hydrolase as a key determinant in the microbial degradation of polychlorinated biphenyls J. Biol. Chem. 275 2000 15701 15708 (Pubitemid 30366867)
40. M. Seeger, M. González, B. Cámara, L. Muñoz, E. Ponce, L. Mejías, C. Mascayano, Y. Vásquez, and S. Sepúlveda-Boza Biotransformation of natural and synthetic isoflavonoids by two recombinant microbial enzymes Appl. Environ. Microbiol. 69 2003 5045 5050 (Pubitemid 37150724)
41. H. Singh Mycoremediation: Fungal Bioremediation 2006 Wiley-Interscience 2 3
42. J. Steer, and J. Harris Shifts in the microbial community in rhizosphere and non-rhizosphere soils during the growth of Agrostis stolonifera Soil Biol. Biochem. 32 2000 869 878 (Pubitemid 30351676)
43. Y. Teng, Y.M. Luo, X. Sun, C. Tu, L. Xu, W. Liu, Z.G. Li, and P. Christie Influence of Arbuscular Mycorrhiza and Rhizobium on phytoremediation by alfalfa of an agricultural soil contaminated with weathered PCBs: a field study Int. J. Phytoremediat. 12 2010 516 533
44. C. Ter Braak, and P. Smilauer Canoco for Windows Version 4.5 2002 Biometris-Plant Research International Wageningen
45. V. Tigini, V. Prigione, S. Di Toro, F. Fava, and G.C. Varese Isolation and characterisation of polychlorinated biphenyl (PCB) degrading fungi from a historically contaminated soil Microb. Cell Fact. 8 2009 5
46. C. Tu, Y. Teng, Y.M. Luo, X. Sun, S. Deng, Z.G. Li, W.X. Liu, and Z.H. Xu PCB removal, soil enzyme activities, and microbial community structures during the phytoremediation by alfalfa in field soils J. Soils Sedim. 11 2011 649 656
47. O. Uhlik, L. Musilova, J. Ridl, M. Hroudova, C. Vlcek, J. Koubek, M. Holeckova, M. Mackova, and T. Macek Plant secondary metabolite-induced shifts in bacterial community structure and degradative ability in contaminated soil Appl. Microbiol. Biotechnol. 96 2012 1 12
48. V. Vancura, and A. Hovadik Root exudates of plants. II. Composition of root exudates of some vegetables Plant Soil 22 1965 21 32
49. J.C. White Differential bioavailability of field-weathered p, p′-DDE to plants of the Cucurbita and Cucumis genera Chemosphere 49 2002 143 152 (Pubitemid 35012928)
50. J.C. White, Z.D. Parrish, M. Isleyen, M.P.N. Gent, W. Iannucci-Berger, B.D. Eitzer, J.W. Kelsey, and M.J.I. Mattina Influence of citric acid amendments on the availability of weathered PCBs to plant and earthworm species Int. J. Phytoremediat. 8 2006 63 79 (Pubitemid 43254524)
51. M.L. Whitfield Aslund, B.A. Zeeb, A. Rutter, and K.J. Reimer In situ phytoextraction of polychlorinated biphenyl-(PCB) contaminated soil Sci. Total Environ. 374 2007 1 12 (Pubitemid 46227565)
52. M.L. Whitfield Aslund, A. Rutter, K.J. Reimer, and B.A. Zeeb The effects of repeated planting, planting density, and specific transfer pathways on PCB uptake by Cucurbita pepo grown in field conditions Sci. Total Environ. 405 2008 14 25
53. Y.P. Wu, N. Ding, G. Wang, J.M. Xu, J.J. Wu, and P.C. Brookes Effects of different soil weights, storage times and extraction methods on soil phospholipid fatty acid analyses Geoderma 150 2009 171 178
54. B.A. Zeeb, J.S. Amphlett, A. Rutter, and K.J. Reimer Potential for phytoremediation of polychlorinated biphenyl-(PCB)-contaminated soil Int. J. Phytoremediat. 8 2006 199 221 (Pubitemid 44266913)
55. L. Zelles Fatty acid patterns of phospholipids and lipopolysaccharides in the characterisation of microbial communities in soil: a review Biol. Fertil. Soils 29 1999 111 129 (Pubitemid 29235510)