Shifts in the microbial community in rhizosphere and non-rhizosphere soils during the growth of Agrostis stolonifera

Soil Biology and Biochemistry

Volumn 32, Issue 6, 2000, Pages 869-878

  Steer, J ^a   Harris, J A ^a  

^a UNIVERSITY OF EAST LONDON   (United Kingdom)

Author keywords

Community structure; Laminar pot; Phospholipid fatty acids; Plant growth; Rhizosphere

Indexed keywords

BIOMASS; COMMUNITY STRUCTURE; FATTY ACID; MICROBE RESPIRATION; MICROBIAL COMMUNITY; PLANT GROWTH; PRINCIPAL COMPONENT ANALYSIS; RHIZOSPHERE; SOIL;

MICROBIAL COMMUNITY; RHIZOSPHERE; SOIL MICROORGANISM;

AGROSTIS STOLONIFERA;

EID: 0034128996     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0038-0717(99)00219-9     Document Type: Article

References (40)

1. Anderson J.P.E., Domsch K.H. A physiological method for the quantitative measurement of microbial biomass in soils. Soil Biology & Biochemistry. 10:1978;215-221.
2. Bååth E., Frostegård Å, Fritze H. Soil bacterial biomass, activity, phospholipid fatty acid pattern, and pH tolerance in an area polluted with alkaline dust deposition. Applied and Environmental Microbiology. 58:1992;4026-4031.
3. 4 before and after chloroform fumigation. Soil Biology & Biochemistry. 24:1992;569-578.
4. Clemensson-Lindell A., Persson H. Effects of freezing on rhizosphere and root nutrient content using two soil sampling methods. Plant and Soil. 139:1992;39-45.
5. Degens B.P., Harris J.A. Development of a physiological approach to measuring the catabolic diversity of soil microbial communities. Soil Biology & Biochemistry. 29:1997;1309-1320.
6. Dormaar J.F. Effect of plant roots on chemical and biochemical properties of surrounding discrete soil zones. Canadian Journal of Soil Science. 68:1988;233-242.
7. Dowling N.J.E., Widdel F., White D.C. Phospholipid ester-linked fatty acid biomarkers of acetate-oxidising sulphate-reducers and other sulphide-forming bacteria. Journal of General Microbiology. 132:1986;1815-1825.
8. Federle T.W. Microbial distribution in soil - new techniques. Megusar F., Gantar M. Perpectives in Microbial Ecology. 1986;493-498 Slovene Society for Microbiology, Ljubljana.
9. Frostegård Å, Bååth E. The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil. Biology and Fertility of Soils. 22:1996;59-65.
10. Frostegård Å, Tunlid A., Bååth E. Microbial biomass measured as total lipid phosphate in soils of different organic content. Journal of Microbiological Methods. 14:1991;151-163.
11. Grayston S.J., Wang S., Campbell C.D., Edwards A.C. Selective influence of plant species on microbial diversity in the rhizosphere. Soil Biology & Biochemistry. 30:1998;369-378.
12. Helal H.M., Sauerbeck D.R. Method to study turnover processes in soil layers of different proximity to roots. Soil Biology & Biochemistry. 15:1983;223-225.
13. Joergensen R.G. Quantification of the microbial biomass by determining ninhydrin-reactive N. Soil Biology & Biochemistry. 28:1996;301-306.
14. 4 soil extracts. Soil Biology & Biochemistry. 22:1990;1023-1027.
15. Joergensen R.G., Brookes P.C., Jenkinson D.S. Survival of the soil microbial biomass at elevated temperatures. Soil Biology & Biochemistry. 22:1990;1129-1139.
16. 4 soil extracts. Soil Biology & Biochemistry. 28:1996;1147-1153.
17. Jungk A. Soil-root interactions in the rhizosphere affecting plant availability of phosphorus. Journal of Plant Nutrition. 10:1987;1197-1204.
18. Keith H., Oades J.M., Martin J.K. Input of carbon to soil from wheat plants. Soil Biology & Biochemistry. 18:1986;445-449.
19. LeChevalier H., LeChevalier M.P. Chemotaxanomic use of lipids - an overview. Ratledge C., Wilkinson S.G. Microbial Lipids. Vol. 1:1988;869-902 Academic Press, London.
20. Martens R. Current methods for measuring microbial biomass C in soil: potentials and limitations. Biology and Fertility of Soils. 19:1995;87-99.
21. 14C dilution: implications of carbon partitioning in plants. Plant and Soil. 88:1985;353-365.
22. Mueller T., Joergensen R.G., Meyer B. Estimation of soil microbial biomass C in the presence of living roots by fumigation-extraction. Soil Biology & Biochemistry. 24:1992;179-181.
23. Nye P.H. Changes of pH across the rhizosphere induced by roots. Plant and Soil. 61:1981;7-26.
24. O'Leary W.M., Wilkinson S.G. Gram-positive bacteria. Ratledge C., Wilkinson S.G. Microbial Lipids. Vol. 1:1988;117-185 Academic Press, London.
25. Olsson P.A., Bååth E., Jakobsen I., Söderström B. The use of phospholipid and neutral fatty acids to estimate biomass of arbuscular mycorrhizal fungi in soil. Mycological Research. 99:1995;623-629.
26. Pennanen T., Fritze H., Vanhala P., Kiikkilä O., Neuvonen S., Bååth E. Structure of a microbial community in soil after prolonged addition of low levels of simulated acid rain. Applied and Environmental Microbiology. 64:1998;2173-2180.
27. Pennanen T., Frostegård Å, Fritze H., Bååth E. Phospholipid fatty acid composition and heavy metal tolerance of soil microbial communities along two heavy metal-polluted gradients in coniferous forests. Applied and Environmental Microbiology. 62:1996;420-428.
28. Rillig M.C., Scow K.M., Klironomo J.N., Allen M.F. Microbial carbon-substrate utilization in the rhizosphere of Gutierrezia sarothrae grown in elevated atmospheric carbon dioxide. Soil Biology & Biochemistry. 29:1997;1387-1394.
29. Rovira A.D. Plant root exudates. The Botanical Review. 35:1969;35-56.
30. Rovira A.D., Davey C.B. Biology of the rhizosphere. Carson E.W. The Plant Root and its Environment. 1974;153-204 University Press of Virginia, Charlottesville.
31. Russell R.S. Plant Root Systems: Their Function and Interaction with the Soil. 1977;McGraw-Hill, Maidenhead.
32. Stoumann Jensen L., Sørensen J. Microscale fumigation-extraction and substrate-induced respiration methods for measuring microbial biomass in barley rhizosphere. Plant and Soil. 162:1994;151-161.
33. Sundh I., Nilsson M., Borgå P. Variation in microbial community structure in two boreal peatlands as determined by analysis of phospholipid fatty acid profiles. Applied and Environmental Microbiology. 63:1997;1476-1482.
34. Van Veen J.A., Merckx R., Van De Gejin S.C. Plant and soil related control of the flow of carbon from roots through the soil microbial biomass. Clarholm M., Bergstrom L. Ecology of Arable Lands. 1989;43-52 Kluwer, Amsterdam.
35. Wilkinson S.G. Gram-negative bacteria. Ratledge C., Wilkinson S.G. Microbial Lipids. Vol. 1:1988;299-489 Academic Press, London.
36. Wu J., Brookes P.C., Jenkinson D.S. Formation and destruction of microbial biomass during the decomposition of glucose and ryegrass in soil. Soil Biology & Biochemistry. 25:1993;1435-1441.
37. Wu J., Joergensen R.G., Pommerening B., Chaussod R., Brookes P.C. Measurement of soil microbial biomass C by fumigation-extraction - an automated procedure. Soil Biology & Biochemistry. 22:1990;1167-1169.
38. Zagallo A.C., Katznelson H. Metabolic activity of bacterial isolates from wheat rhizospheres and control soil. Journal of Bacteriology. 73:1957;760-764.
39. 2. Ecological Applications. 6:1996;257-262.
40. Zelles L., Rackwitz R., Bai Q.Y., Beck T., Beese F. Discrimination of microbial diversity by fatty acid profiles of phospholipids and lipopolysaccharides in differently cultivated soils. Plant and Soil. 170:1995;115-122.