Extrapulmonary Tuberculosis: Mycobacterium tuberculosis Strains and Host Risk Factors in a Large Urban Setting in Brazil

PLoS ONE

Volumn 8, Issue 10, 2013, Pages

  Gomes, Teresa ^a   Vinhas, Solange Alves ^a   Reis Santos, Bárbara ^a   Palaci, Moisés ^a   Peres, Renata Lyrio ^a   Aguiar, Paola P ^a   Ribeiro, Fabiola Karla Correa ^a   Marques, Hebert Silva ^a   Dettoni, Valdério do Valle ^a   Johnson, John L ^b   Riley, Lee W ^c   Maciel, Ethel Leonor ^a  

^a FEDERAL UNIVERSITY OF ESPÍRITO SANTO   (Brazil)

^b CASE WESTERN RESERVE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AGED; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BRAZIL; CAUCASIAN; CHILD; CLUSTER ANALYSIS; CONTROLLED STUDY; DEMOGRAPHY; EDUCATIONAL STATUS; ETHNICITY; EXTRAPULMONARY TUBERCULOSIS; FAMILIA; FEMALE; GENOTYPE; GENOTYPING TECHNIQUE; HIGH SCHOOL; HOST; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MALE; MILIARY TUBERCULOSIS; MYCOBACTERIUM TUBERCULOSIS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RETROSPECTIVE STUDY; RISK FACTOR; SPOLIGOTYPING; URBAN AREA;

ADOLESCENT; ADULT; AGED; BRAZIL; CHILD; CHILD, PRESCHOOL; CITIES; FEMALE; GENOTYPE; HUMANS; MALE; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; RETROSPECTIVE STUDIES; RISK FACTORS; SPECIES SPECIFICITY; TUBERCULOSIS; TUBERCULOSIS, PULMONARY; YOUNG ADULT;

EID: 84884831438     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0074517     Document Type: Article

References (44)

1. WHO (2012) World Health Organization. Global tuberculosis report 2012. Geneva.
2. Brasil, (2012) Ministerio da Saude. Série histórica da taxa de mortalidade de tuberculose. In: Saúde SdVe, editor. Brasilia.
3. Yang Z, Kong Y, Wilson F, Foxman B, Fowler AH, et al. (2004) Identification of risk factors for extrapulmonary tuberculosis. Clin Infect Dis 38: 199-205. doi:10.1086/380644. PubMed: 14699451.
4. Rieder HL, Snider DE Jr, Cauthen GM, (1990) Extrapulmonary tuberculosis in the United States. Am Rev Respir Dis 141: 347-351. doi:10.1164/ajrccm/141.2.347. PubMed: 2301852.
5. Fiske CT, Griffin MR, Erin H, Warkentin J, Lisa K, et al. (2010) Black race, sex, and extrapulmonary tuberculosis risk: an observational study. BMC Infect Dis 2010/01/26 ed. 16 pp PubMed: 20096113.
6. Peto HM, Pratt RH, Harrington TA, LoBue PA, Armstrong LR, (2009) Epidemiology of extrapulmonary tuberculosis in the United States, 1993-2006. Clin Infect Dis 49: 1350-1357. doi:10.1086/605559. PubMed: 19793000.
7. Nicol MP, Sola C, February B, Rastogi N, Steyn L, et al. (2005) Distribution of strain families of Mycobacterium tuberculosis causing pulmonary and extrapulmonary disease in hospitalized children in Cape Town, South Africa. J Clin Microbiol 43: 5779-5781. doi:10.1128/JCM.43.11.5779-5781.2005. PubMed: 16272518.
8. Lari N, Rindi L, Cristofani R, Rastogi N, Tortoli E, et al. (2009) Association of Mycobacterium tuberculosis complex isolates of BOVIS and Central Asian (CAS) genotypic lineages with extrapulmonary disease. Clin Microbiol Infect 15: 538-543. doi:10.1111/j.1469-0691.2009.02712.x. PubMed: 19302095.
9. Coscolla M, Gagneux S, (2010) Does M. tuberculosis genomic diversity explain disease diversity? Drug Discov Today Dis Mech 7: e43-e59. doi:10.1016/j.ddtec.2010.05.002. PubMed: 21076640.
10. Garcia de Viedma D, Lorenzo G, Cardona PJ, Rodriguez NA, Gordillo S, et al. (2005) Association between the infectivity of Mycobacterium tuberculosis strains and their efficiency for extrarespiratory infection. J Infect Dis 192: 2059-2065. doi:10.1086/498245. PubMed: 16288368.
11. García-Rodríguez JF, Álvarez-Díaz H, Lorenzo-García MV, Mariño-Callejo A, Fernández-Rial A, et al. (2011) Extrapulmonary tuberculosis: epidemiology and risk factors. Enferm Infecc Microbiol Clin 29: 502-509. doi:10.1016/j.eimc.2011.03.005. PubMed: 21570159.
12. Click ES, Moonan PK, Winston CA, Cowan LS, Oeltmann JE, (2012) Relationship between Mycobacterium tuberculosis phylogenetic lineage and clinical site of tuberculosis. Clin Infect Dis 54: 211-219. doi:10.1093/cid/cir788. PubMed: 22198989.
13. Sankar MM, Singh J, Angelin Diana SC, Singh S, (2012) Molecular characterization of Mycobacterium tuberculosis isolates from North Indian patients with extrapulmonary tuberculosis. Tuberculosis (Edinb) 93: 75-83. PubMed: 23140853.
14. Brasil, (2012) Ministério da Saúde. Boletim Epidemiológico Especial Tuberculose. Secretaria Vigilância Saúde. Brasília. pp. 43.
15. Brasil, (2011) Sistema nacional de vigilância em saúde: relatório de situação: Espírito Santo. Brasília. pp. 5.
16. Brasil, Ministério do Planejamento, (2012) Instituto Brasileiro de Geografia e Estatística. Contagem Populacional.
17. Conde MB, Melo FA, Marques AM, Cardoso NC, Pinheiro VG, et al. (2009) III Brazilian Thoracic Association Guidelines on tuberculosis J Bras Pneumol 35: 1018-1048 PubMed: 19918635.
18. WHO (2011) orld Health Organization; Global TB Control.
19. Brasil, (2008) Manual nacional de vigilância laboratorial da tuberculose e outras micobactérias. In: Epidemiológica MdSSdVeSDdV, editor.
20. Brasil, (2011) Ministerio da Saude. Secretaria de Vigilância em Saúde.Manual de recomendações para o controle da tuberculose no Brasil. In: Epidemiológica DdV, editor pp. pp. 32-34.
21. CDC (2012) Reported Tuberculosis in the United States, 2011. In: Services DoHaH, editor Atlanta, GA: CDC.
22. van Embden JD, Cave MD, Crawford JT, Dale JW, Eisenach KD, et al. (1993) Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J Clin Microbiol 31: 406-409. PubMed: 8381814.
23. Fok A, Numata Y, Schulzer M, FitzGerald MJ, (2008) Risk factors for clustering of tuberculosis cases: a systematic review of population-based molecular epidemiology studies. Int J Tuberc Lung Dis 12: 480-492. PubMed: 18419882.
24. Borgdorff MW, van den Hof S, Kalisvaart N, Kremer K, van Soolingen D, (2011) Influence of sampling on clustering and associations with risk factors in the molecular epidemiology of tuberculosis. Am J Epidemiol 174: 243-251. doi:10.1093/aje/kwr061. PubMed: 21606233.
25. Vinhas SP, Palaci M, Marques HS, Aguiar PPL, Ribeiro FK, et al. (2012) Mycobacterium tuberculosis DNA fingerprint clusters and its relationship with RDRio genotype in Brazil. Tuberculosis (in press).
26. Kamerbeek J, Schouls L, Kolk A, van Agterveld M, van Soolingen D, et al. (1997) Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Clin Microbiol 35: 907-914. PubMed: 9157152.
27. Brudey K, Driscoll JR, Rigouts L, Prodinger WM, Gori A, et al. (2006) Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol 6: 23. doi:10.1186/1471-2180-6-23. PubMed: 16519816.
28. Demay C, Liens B, Burguière T, Hill V, Couvin D, et al. (2012) SITVITWEB--a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology. Infect Genet Evol 12: 755-766. doi:10.1016/j.meegid.2012.02.004. PubMed: 22365971.
29. Gibson JF, Kelso S, Skevington JH, (2010) Band-cutting no more: A method for the isolation and purification of target PCR bands from multiplex PCR products using new technology. Mol Phylogenet Evol 56: 1126-1128. doi:10.1016/j.ympev.2010.05.005. PubMed: 20460160.
30. Suresh K, Chandrashekara S, (2012) Sample size estimation and power analysis for clinical research studies. J Hum Reprod Sci 5: 7-13. PubMed: 22870008.
31. WHO (2012) Tuberculosis countries profiles. World Health Organization.
32. Seiscento M, Vargas FS, Rujula MJ, Bombarda S, Uip DE, et al. (2009) Epidemiological aspects of pleural tuberculosis in the state of São Paulo, Brazil (1998-2005). J Bras Pneumol 35: 548-554. doi:10.1590/S1806-37132009000600008. PubMed: 19618035.
33. Mazza-Stalder J, Nicod L, Janssens JP, (2012) [Extrapulmonary tuberculosis]. Rev Mal Respir 29: 566-578. doi:10.1016/j.rmr.2011.05.021. PubMed: 22542414.
34. Maciel E, (2012) A promoção de saúde e os determinantes sociais da Tuberculose: elementos para ação. In: Saberes, eds. Promoção de saúde na diversidade humana e na pluralidade de itinerários terapeuticos. Campinas, SP.
35. Gomes T, (2013) Tuberculose extrapulmonar: uma abordagem epidemiológica e molecular. Dissertation Vitória: ES; Universidade Federal do Espírito Santo. 117 p.
36. Roza DLd, MdCGG Caccia-Bava, Martinez EZ, (2012) Spatio-temporal patterns of tuberculosis incidence in Ribeirão Preto State of São Paulo, southeast Brazil, and their relationship with social vulnerability: a Bayesian analysis. Rev Sociedade Bras Med Trop 45: 607-615.
37. Hillemann D, Rüsch-Gerdes S, Boehme C, Richter E, (2011) Rapid molecular detection of extrapulmonary tuberculosis by the automated GeneXpert MTB/RIF system. J Clin Microbiol 49: 1202-1205. doi:10.1128/JCM.02268-10. PubMed: 21270230.
38. Jones BE, Young SM, Antoniskis D, Davidson PT, Kramer F, et al. (1993) Relationship of the manifestations of tuberculosis to CD4 cell counts in patients with human immunodeficiency virus infection. Am Rev Respir Dis 148: 1292-1297. doi:10.1164/ajrccm/148.5.1292. PubMed: 7902049.
39. Kingkaew N, Sangtong B, Amnuaiphon W, Jongpaibulpatana J, Mankatittham W, et al. (2009) HIV-associated extrapulmonary tuberculosis in Thailand: epidemiology and risk factors for death. Int J Infect Dis 13: 722-729. doi:10.1016/j.ijid.2008.11.013. PubMed: 19196530.
40. Pawlowski A, Jansson M, Sköld M, Rottenberg ME, Källenius G, (2012) Tuberculosis and HIV co-infection. PLOS Pathog 8: e1002464. PubMed: 22363214.
41. Rasolofo Razanamparany V, Ménard D, Aurégan G, Gicquel B, Chanteau S, (2002) Extrapulmonary and pulmonary tuberculosis in antananarivo (madagascar): high clustering rate in female patients. J Clin Microbiol 40: 3964-3969. doi:10.1128/JCM.40.11.3964-3969.2002. PubMed: 12409359.
42. Lazzarini LC, Huard RC, Boechat NL, Gomes HM, Oelemann MC, et al. (2007) Discovery of a novel Mycobacterium tuberculosis lineage that is a major cause of tuberculosis in Rio de Janeiro, Brazil. J Clin Microbiol 45: 3891-3902. doi:10.1128/JCM.01394-07. PubMed: 17898156.
43. Benedetti A, Behr MA, Schwartzman K, Jin Y, (2010) How Close Is Close Enough? Exploring Matching Criteria in the Estimation of Recent Transmission of Tuberculosis. Am J Epidemiol 172: 318-326. doi:10.1093/aje/kwq124. PubMed: 20576754.
44. Ong A, Creasman J, Hopewell PC, Gonzalez LC, Wong M, et al. (2004) A molecular epidemiological assessment of extrapulmonary tuberculosis in San Francisco. Clin Infect Dis 38: 25-31. doi:10.1086/381100. PubMed: 14679444.