Comparative proteomic analysis of oral squamous cell carcinoma and adjacent non-tumour tissue from Thailand

Archives of Oral Biology

Volumn 58, Issue 11, 2013, Pages 1677-1685

  Chanthammachat, Pitak ^a   Promwikorn, Waraporn ^a   Pruegsanusak, Kowit ^a   Roytrakul, Sittiruk ^b   Srisomsap, Chantragan ^c   Chokchaichamnankit, Daranee ^c   Svasti, Jisnuson ^c   Boonyaphiphat, Pleumjit ^a   K, Singkhamanan ^a   Thongsuksai, Paramee ^a  

^a PRINCE OF SONGKLA UNIVERSITY   (Thailand)

^b NATIONAL SCIENCE AND TECHNOLOGY DEVELOPMENT AGENCY   (Thailand)

^c Krung Thep Maha Nakhon   (Thailand)

Author keywords

Immunohistochemistry; Mass spectrometry; Oral squamous cell carcinoma; Proteomics; Quantitative real time RT PCR; Two dimensional gel electrophoresis

Indexed keywords

HEAT SHOCK PROTEIN; KERATIN; KIAA1199 PROTEIN, HUMAN; PEROXIREDOXIN 6; PROTEIN; TUBULIN; TUMOR MARKER;

ARTICLE; DOWN REGULATION; GENE EXPRESSION REGULATION; GENETICS; HUMAN; IMMUNOHISTOCHEMISTRY; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MOUTH SQUAMOUS CELL CARCINOMA; MOUTH TUMOR; PHYSIOLOGY; PROTEOMICS; QUANTITATIVE REAL-TIME RT-PCR; REAL TIME POLYMERASE CHAIN REACTION; SQUAMOUS CELL CARCINOMA; THAILAND; TWO DIMENSIONAL GEL ELECTROPHORESIS; TWO-DIMENSIONAL GEL ELECTROPHORESIS; UPREGULATION; VALIDATION STUDY;

IMMUNOHISTOCHEMISTRY; MASS SPECTROMETRY; ORAL SQUAMOUS CELL CARCINOMA; PROTEOMICS; QUANTITATIVE REAL-TIME RT-PCR; TWO-DIMENSIONAL GEL ELECTROPHORESIS;

CARCINOMA, SQUAMOUS CELL; DOWN-REGULATION; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; GENE EXPRESSION REGULATION, NEOPLASTIC; HEAT-SHOCK PROTEINS; HUMANS; IMMUNOHISTOCHEMISTRY; KERATINS; MOUTH NEOPLASMS; PEROXIREDOXIN VI; PROTEINS; PROTEOMICS; REAL-TIME POLYMERASE CHAIN REACTION; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; THAILAND; TUBULIN; TUMOR MARKERS, BIOLOGICAL; UP-REGULATION;

EID: 84884770250     PISSN: 00039969     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.archoralbio.2013.08.002     Document Type: Article

References (33)

1. D.M. Parkin, F. Bray, J. Ferlay, and P. Pisani Global cancer statistics, 2002 CA Cancer J Clin 55 2 2005 74 108 (Pubitemid 40372904)
2. T. Khuhaprema, P. Srivatanakul, H. Sriplung, S. Wiangnon, Y. Sumitsawan, and P. Attasara Cancer in Thailand vol. IV, 1998-2000 2007 National Cancer Institute Bangkok
3. A.L. Carvalho, I.N. Nishimoto, J.A. Califano, and L.P. Kowalski Trends in incidence and prognosis for head and neck cancer in the United States: a site-specific analysis of the SEER database Int J Cancer 114 5 2005 806 816 (Pubitemid 40344442)
4. D. Hanahan, and R.A. Weinberg The hallmarks of cancer Cell 100 1 2000 57 70 (Pubitemid 30046295)
5. L.A. Loeb, K.R. Loeb, and J.P. Anderson Multiple mutations and cancer Proc Natl Acad Sci U S A 100 3 2003 776 781 (Pubitemid 36183906)
6. P.C. Herrmann, L.A. Liotta, and E.F. Petricoin 3rd. Cancer proteomics: the state of the art Dis Markers 17 2 2001 49 57 (Pubitemid 32964836)
7. A. Pandey, and M. Mann Proteomics to study genes and genomes Nature 405 6788 2000 837 846 (Pubitemid 30407862)
8. B. Cañas, D. López-Ferrer, A. Ramos-Fernández, E. Camafeita, and E. Calvo Mass spectrometry technologies for proteomics Brief Funct Genomic Proteomic 4 4 2006 295 320
9. T.M. Annesley Ion suppression in mass spectrometry Clin Chem 49 7 2003 1041 1044 (Pubitemid 36751088)
10. H. Baker, V. Patel, A.A. Molinolo, E.J. Shillitoe, J.F. Ensley, and G.H. Yoo Proteome-wide analysis of head and neck squamous cell carcinomas using laser-capture microdissection and tandem mass spectrometry Oral Oncol 41 2 2005 183 199 (Pubitemid 40202885)
11. D. Turhani, K. Krapfenbauer, D. Thurnher, H. Langen, and M. Fountoulakis Identification of differentially expressed, tumor-associated proteins in oral squamous cell carcinoma by proteomic analysis Electrophoresis 27 7 2006 1417 1423
12. W.Y. Lo, M.H. Tsai, Y. Tsai, C.H. Hua, F.J. Tsai, and S.Y. Huang Identification of over-expressed proteins in oral squamous cell carcinoma (OSCC) patients by clinical proteomic analysis Clin Chim Acta 376 1-2 2007 101 107 (Pubitemid 44880973)
13. V. Patel, B.L. Hood, A.A. Molinolo, N.H. Lee, T.P. Conrads, and J.C. Braisted Proteomic analysis of laser-captured paraffin-embedded tissues: a molecular portrait of head and neck cancer progression Clin Cancer Res 14 4 2008 1002 1014 (Pubitemid 351302545)
14. Z. Wang, L. Jiang, C. Huang, Z. Li, L. Chen, and L. Gou Comparative proteomics approach to screening of potential diagnostic and therapeutic targets for oral squamous cell carcinoma Mol Cell Proteomics 7 9 2008 1639 1650
15. M.A. Merkley, P.M. Weinberger, L.L. Jackson, R.H. Podolsky, J.R. Lee, and W.S. Dynan 2D-DIGE proteomic characterization of head and neck squamous cell carcinoma Otolaryngol Head Neck Surg 141 5 2009 626 632
16. U.J. Thiel, R. Feltens, B. Adryan, R. Gieringer, C. Brochhausen, and R. Schuon Analysis of differentially expressed proteins in oral squamous cell carcinoma by MALDI-TOF MS J Oral Pathol Med 40 5 2011 369 379
17. R. Arya, M. Mallik, and S.C. Lakhotia Heat shock genes - integrating cell survival and death J Biosci 32 3 2007 595 610 (Pubitemid 46708710)
18. Y. Luo, J. Zhang, Y. Liu, A.C. Shaw, X. Wang, and S. Wu Comparative proteome analysis of breast cancer and normal breast Mol Biotechnol 29 3 2005 233 244 (Pubitemid 41411176)
19. H. Kubota, S. Yamamoto, E. Itoh, Y. Abe, A. Nakamura, and Y. Izumi Increased expression of co-chaperone HOP with HSP90 and HSC70 and complex formation in human colonic carcinoma Cell Stress Chaperones 15 6 2010 1003 1011
20. R. Moll, W.W. Franke, D.L. Schiller, B. Geiger, and R. Krepler The catalog of human cytokeratins: patterns of expression in normal epithelia, tumors and cultured cells Cell 31 1 1982 11 24 (Pubitemid 13215192)
21. R.A. Weiss, R. Eichner, and T.T. Sun Monoclonal antibody analysis of keratin expression in epidermal diseases: a 48- and 56-kDalton keratin as molecular markers for hyperproliferative keratinocytes J Cell Biol 98 4 1984 1397 1406 (Pubitemid 14128924)
22. R. Kitamura, T. Toyoshima, H. Tanaka, S. Kawano, T. Kiyosue, and R. Matsubara Association of cytokeratin 17 expression with differentiation in oral squamous cell carcinoma J Cancer Res Clin Oncol 138 8 2012 1299 1310
23. S.D. Bernal, and R.A. Stahel Cytoskeleton-associated proteins: their role as cellular integrators in the neoplastic process Crit Rev Oncol Hematol 3 3 1985 191 204 (Pubitemid 15020980)
24. R.A. Stanton, K.M. Gernert, J.H. Nettles, and R. Aneja Drugs that target dynamic microtubules: a new molecular perspective Med Res Rev 31 3 2011 443 481
25. M. Schmidt, G. Schler, P. Gruensfelder, and F. Hoppe Differential gene expression in a paclitaxel-resistant clone of a head and neck cancer cell line Eur Arch Otorhinolaryngol 263 2 2006 127 134 (Pubitemid 43168185)
26. R. Ralhan, O. Masui, L.V. Desouza, A. Matta, M. Macha, and K.W. Siu Identification of proteins secreted by head and neck cancer cell lines using LC-MS/MS: Strategy for discovery of candidate serological biomarkers Proteomics 11 12 2011 2363 2376
27. K.A. Liao, Y.G. Tsay, L.C. Huang, H.Y. Huang, C.F. Li, and T.F. Wu Search for the tumor-associated proteins of oral squamous cell carcinoma collected in Taiwan using proteomics strategy J Proteome Res 10 5 2011 2347 2358
28. E. Hayashi, Y. Kuramitsu, M. Fujimoto, X. Zhang, T. Tanaka, and K. Uchida Proteomic profiling of differential display analysis for human oral squamous cell carcinoma: 14-3-3σ protein is upregulated in human oral squamous cell carcinoma and dependent on the differentiation level Proteomics Clin Appl 3 11 2009 1338 1347
29. K. Laimer, N. Blassnig, G. Spizzo, F. Kloss, M. Rasse, and P. Obrist Prognostic significance of 14-3-3 sigma expression in oral squamous cell carcinoma (OSCC) Oral Oncol 45 2 2009 127 134
30. H.J. Choi, S.W. Kang, C.H. Yang, S.G. Rhee, and S.E. Ryu Crystallization and preliminary X-ray studies of hORF6, a novel human antioxidant enzyme Acta Crystallogr D Biol Crystallogr 54 Pt 3 1998 436 437
31. S. Abe, S. Usami, and Y. Nakamura Mutations in the gene encoding KIAA1199 protein, an inner-ear protein expressed in Deiters' cells and the fibrocytes, as the cause of nonsyndromic hearing loss J Hum Genet 48 11 2003 564 570 (Pubitemid 38017651)
32. J. Sabates-Bellver, L.G. Van der Flier, M. de Palo, E. Cattaneo, C. Maake, and H. Rehrauer Transcriptome profile of human colorectal adenomas Mol Cancer Res 5 12 2007 1263 1275
33. S. Matsuzaki, F. Tanaka, K. Mimori, K. Tahara, H. Inoue, and M. Mori Clinicopathologic significance of KIAA1199 overexpression in human gastric cancer Ann Surg Oncol 16 7 2009 2042 2051