Effects of polymorphic DNA on the fluorescent properties of silver nanoclusters

Photochemical and Photobiological Sciences

Volumn 12, Issue 10, 2013, Pages 1864-1872

  Li, Wei ^a   Liu, Lu ^a   Fu, Yan ^a   Sun, Yanhua ^b   Zhang, Jinli ^a   Zhang, Rongxin ^b  

^a TIANJIN UNIVERSITY   (China)

^b TIANJIN MEDICAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; GUANINE QUADRUPLEX; METAL NANOPARTICLE; SILVER;

CELL SURVIVAL; CHEMISTRY; CIRCULAR DICHROISM; CONFOCAL MICROSCOPY; DRUG EFFECTS; GENETIC TRANSFECTION; HELA CELL LINE; HUMAN; METABOLISM; PARTICLE SIZE; THERMODYNAMICS; TOXICITY; ARTICLE; DRUG EFFECT; HELA CELL;

CELL SURVIVAL; CIRCULAR DICHROISM; DNA; G-QUADRUPLEXES; HELA CELLS; HUMANS; METAL NANOPARTICLES; MICROSCOPY, CONFOCAL; PARTICLE SIZE; SILVER; THERMODYNAMICS; TRANSFECTION;

EID: 84884694582     PISSN: 1474905X     EISSN: 14749092     Source Type: Journal    
DOI: 10.1039/c3pp50026h     Document Type: Article

References (39)

1. T. Vosch Y. Antoku J. C. Hsiang C. I. Richards J. I. Gonzalez R. M. Dickson Strongly emissive individual DNA-encapsulated Ag nanoclusters as single-molecule fluorophores Proc. Natl. Acad. Sci. U. S. A. 2007 104 12616 12621
2. D. Isabel H. A. R. Robin Fluorescent silver nanoclusters Nanoscale 2011 3 1963 1970
3. L. Shang S. J. Dong G. U. Nienhaus Ultra-small fluorescent metal nanoclusters: Synthesis and biological applications Nano Today 2011 6 401 418
4. II sensing Chem. Mater. 2010 22 4364 4371
5. Y. T. Su G. Y. Lan W. Y. Chen H. T. Chang Detection of copper ions through recovery of the fluorescence of DNA-templated copper/silver nanoclusters in the presence of mercaptopropionic acid Anal. Chem. 2010 82 8566 8572
6. J. Sharma H. C. Yeh H. Yoo J. H. Werner J. S. Martinez Silver nanocluster aptamers: in situ generation of intrinsically fluorescent recognition ligands for protein detection Chem. Commun. 2011 47 2294 2296
7. J. T. Petty S. P. Story S. Juarez S. S. Votto A. G. Herbst N. N. Degtyareva B. Sengupta Optical sensing by transforming chromophoric silver clusters in DNA nanoreactors Anal. Chem. 2012 84 356 364
8. S. W. Yang T. Vosch Rapid detection of microRNA by a silver nanocluster DNA probe Anal. Chem. 2011 83 6935 6939
9. P. Shah A. R. Lund S. B. Chaabane P. W. Thulstrup H. G. Kjaergaard E. Fron J. Hofkens S. W. Yang T. Vosch Design aspects of bright red emissive silver nanoclusters/DNA probes for microRNA detection ACS Nano 2012 6 8803 8814
10. J. H. Yu S. A. Patel R. M. Dickson In vitro and intracellular production of peptide-encapsulated fluorescent silver nanoclusters Angew. Chem., Int. Ed. 2007 46 2028 2030
11. T. Y. Zhou Y. H. Huang W. B. Li Z. M. Cai F. Luo C. J. Yang X. Chen Facile synthesis of red-emitting lysozyme-stabilized Ag nanoclusters Nanoscale 2012 4 4103 4106
12. S. Choi R. M. Dickson J. K. Lee J. H. Yu Generation of luminescent noble metal nanodots in cell matrices Photochem. Photobiol. Sci. 2012 11 274 278
13. J. Zheng R. M. Dickson Individual water-soluble dendrimer-encapsulated silver nanodot fluorescence J. Am. Chem. Soc. 2002 124 13982 13983
14. I. Diez H. Jiang R. H. A. Ras Enhanced emission of silver nanoclusters through quantitative phase transfer ChemPhysChem 2010 11 3100 3104
15. D. Schultz E. Gwinn Stabilization of fluorescent silver clusters by RNA homopolymers and their DNA analogs: C,G versus A,T(U) dichotomy Chem. Commun. 2011 47 4715 4717
16. B. Sengupta K. Springer J. G. Buckman S. P. Story O. H. Abe Z. W. Hasan Z. D. Prudowsky S. E. Rudisill N. N. Degtyareva J. T. Petty DNA templates for fluorescent silver clusters and i-motif folding J. Phys. Chem. C 2009 113 19518 19524
17. J. T. Petty C. Fan S. P. Story B. Sengupta A. St. J. Iyer Z. Prudowsky R. M. Dickson DNA encapsulation of 10 silver atoms producing a bright, modulatable, near-infrared-emitting cluster J. Phys. Chem. Lett. 2010 1 2524 2529
18. Y. Fu J. L. Zhang X. F. Chen T. T. Huang X. L. Duan W. Li J. K. Wang Silver nanomaterials regulated by structural competition of G-/C-rich oligonucleotides J. Phys. Chem. C 2011 115 10370 10379
19. J. Wu Y. Fu Z. H. He Y. Han L. Zheng J. L. Zhang W. Li Growth mechanisms of fluorescent silver clusters regulated by polymorphic DNA templates: A DFT study J. Phys. Chem. B 2012 116 1655 1665
20. R. M. Izatt J. J. Christensen J. H. Rytting Sites and thermodynamic quantities associated with proton and metal ion interaction with ribonucleic acid, deoxyribonucleic acid, and their constituent bases, nucleosides, and nucleotides Chem. Rev. 1971 71 439 481
21. W. Li D. Miyoshi S. Nakano N. Sugimoto Structural competition involving G-quadruplex DNA and its complement Biochemistry 2003 42 11736 11744
22. L. Berti G. A. Burley Nucleic acid and nucleotide-mediated synthesis of inorganic nanoparticles Nat. Nanotechnol. 2008 3 81 87
23. J. T. Petty C. Fan S. P. Story B. Sengupta M. Sartin J. C. Hsiang J. W. Perry R. M. Dickson Optically enhanced, near-IR, silver cluster emission altered by single base changes in the DNA template J. Phys. Chem. B 2011 115 7996 8003
24. K. Ma Q. H. Cui Y. Shao F. Wu S. J. Xu G. Y. Liu Emission modulation of DNA-templated fluorescent silver nanoclusters by divalent magnesium ion J. Nanosci. Nanotechnol. 2012 12 861 869
25. S. Choi J. H. Yu S. A. Patel Y. L. Tzeng R. M. Dickson Tailoring silver nanodots for intracellular staining Photochem. Photobiol. Sci. 2011 10 109 115
26. D. Schultz E. G. Gwinn Silver atom and strand numbers in fluorescent and dark Ag:DNAs Chem. Commun. 2012 48 5748 5750
27. Z. P. Sun Y. L. Wang Y. T. Wei R. Liu H. R. Zhu Y. Y. Cui Y. L. Zhao X. Y. Gao Ag cluster-aptamer hybrid: specifically marking the nucleus of live cells Chem. Commun. 2011 47 11960 11962
28. J. Sharma R. C. Rocha M. L. Phipps H. C. Yeh K. A. Balatsky D. M. Vu A. P. Shreve J. H. Werner J. S. Martinez A DNA-templated fluorescent silver nanocluster with enhanced stability Nanoscale 2012 4 4107 4110
29. S. Leavitt E. Freire Direct measurement of protein binding energetics by isothermal titration calorimetry Curr. Opin. Struct. Biol. 2001 11 560 566
30. Y. Fu X. Wang J. L. Zhang Y. Xiao W. Li J. K. Wang Orderly microaggregates of G-/C-Rich oligonucleotides associated with spermine Biomacromolecules 2011 12 747 756
31. +-nucleobase interactions with isothermal titration calorimetry (ITC): towards patterned DNA metallization Nanoscale 2009 1 122 127
32. A. Ono S. Cao H. Togashi M. Tashiro T. Fujimoto T. Machinami S. Oda Y. Miyake I. Okamoto Y. Tanaka Specific interactions between silver(I) ions and cytosine-cytosine pairs in DNA duplexes Chem. Commun. 2008 4825 4827
33. B. Sengupta C. M. Ritchie J. G. Buckman K. R. Johnsen P. M. Goodwin J. T. Petty Base-directed formation of fluorescent silver clusters J. Phys. Chem. C 2008 112 18776 18782
34. B. Lippert Effects of metal-ion binding on nucleobase pairing: stabilization, prevention and mismatch formation J. Chem. Soc., Dalton Trans. 1997 3971 3976
35. K. Loo N. Degtyareva J. Park B. Sengupta M. Reddish C. C. Rogers A. Bryant J. T. Petty Ag-mediated assembly of 5′-guanosine monophosphate J. Phys. Chem. B 2010 114 4320 4326
36. J. T. Petty J. Zheng N. V. Hud R. M. Dickson DNA-templated Ag nanocluster formation J. Am. Chem. Soc. 2004 126 5207 5212
37. J. T. Petty S. P. Story J. C. Hsiang R. M. Dickson DNA-templated molecular silver fluorophores J. Phys. Chem. Lett. 2013 4 1148 1155
38. A. Hirko F. Tang J. A. Hughes Cationic lipid vectors for plasmid DNA delivery Curr. Med. Chem. 2003 10 1185 1193
39. Y. Antoku J. Hotta H. Mizuno R. M. Dickson J. Hofkens T. Vosch Transfection of living HeLa cells with fluorescent poly-cytosine encapsulated Ag nanoclusters Photochem. Photobiol. Sci. 2010 9 716 772