Epigenetic contributions to adaptive radiation: Insights from threespine stickleback

Epigenetics: Linking Genotype and Phenotype in Development and Evolution

Volumn , Issue , 2011, Pages 317-336

  Foster, Susan A ^a   Wund, Matthew A ^a  

^a CLARK UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84884549178     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (103)

1. Ancel, L. W., and W. Fontana. 2000. Plasticity, evolvability, and modularity in RNA. J Exp Zoolog 288:242-83.
2. Aubret, F., X. Bonnet, and R. Shine. 2007. The role of adaptive plasticity in a major evolutionary transition: Early aquatic experience affects locomotor performance of terrestrial snakes. Funct Ecol 21:1154-61.
3. Badyaev, A. V. 2005. Stress-induced variation in evolution: From behavioural plasticity to genetic assimilation. Proc R Soc Lond B 272:877-86.
4. Baird, N. A., P. D. Etter, T. S. Atwood, M. C. Currey, A. L. Shiver, Z. A. Lewis, E. U. Selker, et al. 2008. Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE 3:e3376.
5. Baker, J. A. 1994. Life history variation in female threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 144-87. Oxford: Oxford University Press.
6. Baldwin, J. M. 1896. A new factor in evolution. Am Nat 30:441-51.
7. Baldwin, J. M. 1902. Development and Evolution. New York: Macmillan.
8. Beecher, R. M., and R. S. Corruccini. 1981. Effects of diet consistency on craniofacial and occlusal development in the rat. Angle Orthod 51:61-9.
9. Behera, N., and V. Nanjundiah. 1995. An investigation into the role of phenotypic plasticity in evolution. J Theor Biol 172:225-34.
10. Bell, M. A. 1994. Paleobiology and evolution of threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 438-71. Oxford: Oxford University Press.
11. Bell, M. A., and S. A. Foster. 1994. Introduction to the evolutionary biology of the threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 1-27. Oxford: Oxford University Press.
12. Boake, C. R. B. 1989. Repeatability: Its role in evolutionary studies of mating behavior. Evol Ecol 3:173-82.
13. Brodie, E. D., and N. H. Russell. 1999. The consistency of individual differences in behaviour: Temperature effects on antipredator behaviour in garter snakes. Anim Behav 57:445-51.
14. Carroll, S. P., and P. S. Corneli. 1999. The evolution of behavioral norms of reaction as a problem in ecological genetics. In Geographic Variation in Behavior: Perspectives on Evolutionary Mechanisms, ed. S. A. Foster and J. A. Endler, 52-68. New York: Oxford University Press.
15. Carroll, S. P., H. Dingle, and S. P. Klassen. 1997. Genetic differentiation of fitness-associated traits among rapidly evolving populations of the soapberry bug. Evolution 51:1182-8.
16. Carroll, S. P., S. P. Klassen, and H. Dingle. 1998. Rapidly evolving adaptations to host ecology and nutrition in the soapberry bug. Evol Ecol 12:955-68.
17. Chock, R. L. 2008. Re-emergence of ancestral plasticity and the loss of a rare limnetic phenotype in an Alaskan population of threespine stickleback. Master's thesis, Clark University, Worcester, MA.
18. Cooper, W., K. Parsons, A. McIntyre, B. Kern, A. Mc- Gee-Moore, and R. Albertson. 2010. Bentho-pelagic divergence of cichlid feeding architecture was prodigious and consistent during multiple adaptive radiations within African rift-lakes. PLoS ONE 5:e9551.
19. Coss, R. G. 1999. Effects of relaxed natural selection on the evolution of behavior. In Geographic Variation in Behavior: Perspectives on Evolutionary Mechanisms, ed. S. A. Foster and J. A. Endler, 180-208. New York: Oxford University Press.
20. Cresko, W. A. 2000. The ecology and geography of speciation: A case study using an adaptive radiation of threespine stickleback in Alaska. PhD diss., Clark University, Worcester, MA.
21. Cresko, W., K. McGuigan, P. Phillips, and J. Postlethwait. 2007. Studies of threespine stickleback developmental evolution: Progress and promise. Genetica 129:105-26.
22. Crispo, E. 2007. The Baldwin effect and genetic assimilation: Revisiting two mechanisms of evolutionary change mediated by phenotypic plasticity. Evolution 61:2469-79.
23. Day, T., and J. D. McPhail. 1996. The effect of behavioural and morphological plasticity on foraging efficiency in the threespine stickleback (Gasterosteus sp.). Oecologia 108:380-8.
24. Day, T., J. Pritchard, and D. Schluter. 1994. A comparison of 2 sticklebacks. Evolution 48:1723-34.
25. de Jong, G. 2005. Evolution of phenotypic plasticity: Patterns of plasticity and the emergence of ecotypes. New Phytol 166:101-18.
26. Duncan, R. L., and C. H. Turner. 1995. Mechanotransduction and the functional response of bone to mechanical strain. Calcif Tissue Int 57: 344-58.
27. Dzieweczynski, T. L., and W. J. Rowland. 2004. Behind closed doors: Use of visual cover by courting male three-spined stickleback, Gasterosteus aculeatus. Anim Behav 68:465-71.
28. Falconer, D. S. 1981. Introduction to Quantitative Genetics. New York: Longmans.
29. Fear, K. K., and T. D. Price. 1998. The adaptive surface in ecology. Oikos 82:440-8.
30. Foster, S. A. 1985. Group foraging in a coral reef fish: A mechanism for gaining access to defended resources. Anim Behav 33:782-92.
31. Foster, S. A. 1988. Diversionary displays of paternal stickleback: Defenses against cannibalistic groups. Behav Ecol Sociobiol 22:335-40.
32. Foster, S. A. 1994a. Evolution of the reproductive behavior of threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 381-98. Oxford: Oxford University Press.
33. Foster, S. A. 1994b. Inference of evolutionary pattern: Diversionary displays of threespine sticklebacks. Behav Ecol 5:114-21.
34. Foster, S. A. 1995. Understanding the evolution of behavior in threespine stickleback: The value of geographic variation. Behaviour 132:1107-29.
35. Foster, S. A., and J. A. Baker. 2004. Evolution in parallel: New insights from a classic system. Trends Ecol Evol 19:456-9.
36. Foster, S. A., J. A. Baker, and M. A. Bell. 2003. The case for conserving threespine stickleback populations: Protecting an adaptive radiation. Fisheries 28:10-18.
37. Foster, S. A., R. J. Scott, and W. A. Cresko. 1998. Nested biological variation and speciation. Philos Trans R Soc Lond B Biol Sci 353:207-18.
38. Ghalambor, C. K., J. K. McKay, S. P. Carrol, and D. N. Reznick. 2007. Adaptive versus non-adaptive phenotypic plasticity and the potential for contemporary adaptation in new environments. Funct Ecol 21:394-407.
39. Gibson, G. 2005. Evolution: The synthesis and evolution of a supermodel. Science 307:1890-1.
40. Gilbert, S. F., and J. A. Bolker. 2003. Ecological developmental biology: Preface to the symposium. Evol Dev 5:3-8.
41. Gow, J. L., S. M. Rogers, M. Jackson, and D. Schluter. 2008. Ecological predictions lead to the discovery of a benthic-limnetic sympatric species pair of threespine stickleback in Little Quarry Lake, British Columbia. Can J Zool 86:564-71.
42. Grant, V. 1977. Organismic Evolution. San Francisco: Freeman.
43. Hart, P. J. B., and A. B. Gill. 1994. Evolution of foraging behaviour in the threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 207-39. Oxford: Oxford University Press.
44. Hinton, G. E., and S. J. Nowlan. 1987. How learning can guide evolution. Complex Syst 1:497-502.
45. Hohenlohe, P. A., S. Bassham, P. D. Etter, N. Stiffler, E. A. Johnson, and W. A. Cresko. 2010. Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. PLoS Genet 6:1-23.
46. Huey, R., P. Hertz, and B. Sinervo. 2003. Behavioral drive versus behavioral inertia in evolution: A null model approach. Am Nat 161:357-66.
47. Hulslander, C. L. 2003. The evolution of the male threespine stickleback colour signal. Master's thesis, Clark University, Worcester, MA.
48. Huntingford, F. A., P. J. Wright, and J. F. Tierney. 1994. Adaptive variation in antipredator behaviour in threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 277-96. Oxford: Oxford University Press.
49. Kiliaridis, S. 1986. The relationship between masticatory function and craniofacial morphology. III. The eruption pattern of the incisors of the growing rat fed a soft diet. Eur J Orthod 8:71-9.
50. Kingsley, D. M., and C. L. Peichel. 2007. The molecular genetics of evolutionary change in sticklebacks. In Biology of the Three-Spined Stickleback, ed. S. Östlund-Nilsson, I. Mayer, and F. A. Huntingford. Boca Raton, FL: CRC Press.
51. Kirkpatrick, M. 1982. Quantum evolution and punctuated equilibria in continuous genetic characters. Am Nat 119:833-48.
52. Lahti, D. C., N. A. Johnson, B. C. Ajie, S. P. Otto, A. P. Hendry, D. T. Blumstein, R. G. Coss, et al. 2009. Relaxed selection in the wild. Trends Ecol Evol 24:487-96.
53. Lavin, P. A., and J. D. McPhail. 1985. The evolution of freshwater diversity in the threespine stickleback (Gasterosteus aculeatus): Site-specific differentiation of trophic morphology. Can J Zool 63:2632-8.
54. Lavin, P. A., and J. D. McPhail. 1987. Morphological divergence and the organization of trophic characters among lacustrine populations of the threespine stickleback (Gasterosteus aculeatus). Can J Fish Aquat Sci 44:1820-9.
55. Malhi, R. S., G. Rhett, and A. M. Bell. 2006. Mitochondrial DNA evidence of an early Holocene population expansion of threespine sticklebacks from Scotland. Mol Phylogenet Evol 40: 148-54.
56. McCairns, R. J. S., and L. Bernatchez. 2010. Adaptive divergence between freshwater and marine sticklebacks: Insights into the role of phenotypic plasticity from an integrated analysis of candidate gene expression. Evolution 64:1029-47.
57. McPhail, J. D. 1994. Speciation and the evolution of reproductive isolation in the sticklebacks (Gasterosteus) of south-western British Columbia. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 399-437. Oxford: Oxford University Press.
58. Miller, M. R., J. P. Dunham, A. Amores, W. A. Cresko, and E. A. Johnson. 2007. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Res 17:240-8.
59. Morgan, C. L. 1896. On modification and variation. Science 4:733-40.
60. Nomura, S., and T. Takano-Yamamoto. 2000. Molecular events caused by mechanical stress in bone. Matrix Biol 19:91-6.
61. Osborn, H. F. 1896. A mode of evolution requiring neither natural selection nor the inheritance of acquired characters. Trans N Y Acad Sci 15:141-2.
62. Pal, C., and I. Miklos. 1999. Epigenetic inheritance, genetic assimilation, and speciation. J Theor Biol 2003:19-37.
63. Pigliucci, M. 2001. Phenotypic Plasticity: Beyond Nature and Nurture: Syntheses in Ecology and Evolution. Baltimore: Johns Hopkins University Press.
64. Pigliucci, M. 2005. Evolution of phenotypic plasticity: Where are we going now? Trends Ecol Evol 20:481-6.
65. Pigliucci, M. 2007. Do we need an extended evolutionary synthesis? Evolution 61:2743-9.
66. Pigliucci, M., and C. J. Murren. 2003. Genetic assimilation and a possible evolutionary paradox: Can macroevolution sometimes be so fast as to pass us by? Evolution 57:1455-64.
67. Price, T. D., A. Qvarnström, and D. E. Irwin. 2003. The role of phenotypic plasticity in driving genetic evolution. Proc R Soc Lond B 270:1433-40.
68. Reimchen, T. E. 1994. Predators and morphological evolution in threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 240-76. Oxford: Oxford University Press.
69. Reimchen, T. E. 2000. Predator handling failures of lateral plate morphs in Gasterosteus aculeatus: Functional implications for the ancestral plate condition. Behaviour 137:1081-96.
70. Robert, K. 2008. The role of male nuptial coloration in aggression of threespine stickleback: A twopopulation, context-dependent analysis. PhD diss., Clark University, Worcester, MA.
71. Rowland, W. J. 1994. Proximate determinants of stickleback behaviour: An evolutionary perspective. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 297-344. Oxford: Oxford University Press.
72. Rundle, H. D., L. M. Nagel, J. W. Boughman, and D. Schluter. 2000. Natural selection and parallel speciation in sympatric sticklebacks. Science 287:306-8.
73. Sargent, R. C. 1982. Territory quality, male quality, courtship intrusions, and female nest-choice in the threespine stickleback, Gasterosteus aculeatus. Anim Behav 30:364-74.
74. Scheiner, S. M. 1993. Genetics and evolution of phenotypic plasticity. Annu Rev Ecol Syst 24:35-68.
75. Schlichting, C. D. 2004. The role of phenotypic plasticity in diversification. In Phenotypic Plasticity: Functional and Conceptual Approaches, ed. T. J. DeWitt and S. M. Scheiner, 191-200. New York: Oxford University Press.
76. Schlichting, C. D., and M. Pigliucci. 1998. Phenotypic Evolution: A Reaction Norm Perspective. Sunderland, MA: Sinauer.
77. Schluter, D. 1993. Adaptive radiation in sticklebacks: Size, shape and habitat use efficiency. Ecology 74:699-709.
78. Schluter, D. 1994. Experimental evidence that competition promotes divergence in adaptive radiation. Science 266:798-801.
79. Schluter, D. 2000. The Ecology of Adaptive Radiation. Oxford: Oxford University Press.
80. Scoville, A. G., and M. E. Pfrender. 2010. Phenotypic plasticity facilitates recurrent rapid adaptation to introduced predators. Proc Natl Acad Sci USA 107:4260-3.
81. Shaw, K. A., M. L. Scotti, and S. A. Foster. 2007. Ancestral plasticity and the evolutionary diversification of courtship behaviour in threespine sticklebacks. Anim Behav 73:415-72.
82. Simpson, G. G. 1953. The Baldwin effect. Evolution 7:110-17.
83. Snell-Rood, E. C., and D. R. Papaj. 2009. Patterns of phenotypic plasticity in common and rare environments: A study of host use and color learning in the cabbage white butterfly Pieris rapae. Am Nat 173:615-31.
84. Sokal, R. R., and F. J. Rohlf. 1995. Biometry. New York: W. H. Freeman and Company.
85. Spoljaric, M. A., and T. E. Reimchen. 2007. 10,000 years later: Evolution of body shape in Haida Gwaii three-spined stickleback. J Fish Biol 70:1484-1503.
86. Sultan, S. E., and S. C. Stearns. 2005. Environmentally contingent variation: Phenotypic plasticity and norms of reaction. In Variation, ed. B. Hallgrímsson and B. K. Hall, 303-32. Amsterdam: Elsevier Academic Press.
87. Taylor, E. B., and J. D. McPhail. 1999. Evolutionary history of an adaptive radiation in species pairs of threespine sticklebacks (Gasterosteus): Insights from mitochondrial DNA. Biol J Linn Soc 66:271-91.
88. Taylor, E. B., and J. D. McPhail. 2000. Historical contingency and ecological determinism interact to prime speciation in sticklebacks, Gasterosteus. Proc R Soc Lond B 267:2375-84.
89. Ter Pelwijk, J. J., and N. Tinbergen. 1937. Eine reizbiologische analyse einiger verhaltensweisen von Gasterosteus aculeatus (L.). Z Tierpsychol 1:193-200.
90. Turner, C. H. 1998. Three rules for bone adaptation to mechanical stimuli. Bone 23:339-407.
91. Via, S. 1993. Adaptive phenotypic plasticity: Target or by-product of selection in a variable environment? Am Nat 142:352-65.
92. Walker, J. A. 1997. Ecological morphology of lacustrine threespine stickleback Gasterosteus aculeatus L. (Gasterosteidae) body shape. Biol J Linn Soc 61:3-50.
93. Walker, J. A., and M. A. Bell. 2000. Net evolutionary trajectories of body shape evolution within a microgeographic radiation of threespine stickleback (Gasterosteus aculeatus). J Zool Soc Lond 252:293-302.
94. West-Eberhard, M. J. 1989. Phenotypic plasticity and the origins of diversity. Annu Rev Ecology Syst 20:249-78.
95. West-Eberhard, M. J. 1998. Commentary: Evolution in light of development and cell biology, and vice versa. Proc Natl Acad Sci USA 95:8417-19.
96. West-Eberhard, M. J. 2003. Developmental Plasticity and Evolution. New York: Oxford University Press.
97. West-Eberhard, M. J. 2005. Developmental plasticity and the origin of species differences. Proc Natl Acad Sci USA 102:6543-9.
98. Wimberger, P. H. 1992. Plasticity of fish body shape: The effects of diet, development, family and age in two species of Geophagus (Pisces: Cichlidae). Biol J Linn Soc 45:197-218.
99. Windig, J. J., C. G. F. de Kovel, and G. De Jong. 2004. Genetics and mechanics of plasticity. In Phenotypic Plasticity: Functional and Conceptual Approaches, ed. T. J. DeWitt and S. M. Scheiner, 31-49. New York: Oxford University Press.
100. Wintzer, A. P., and P. J. Motta. 2005. Diet-induced phenotypic plasticity in the skull morphology of hatchery-reared Florida largemouth bass, Micropterus salmoides floridanus. Ecol Freshwater Fish 14:311-18.
101. Woltereck, R. 1909. Weitere experimentelle Untersuchungen über Artveränderung, speziell über das Wesen quantitativer Artunterschiede bei Daphniden. Versuche Dtsch Zool Ges 19:110-72.
102. Wootton, R. J. 1994. Energy allocation in the threespine stickleback. In The Evolutionary Biology of the Threespine Stickleback, ed. M. A. Bell and S. A. Foster, 114-43. Oxford: Oxford University Press.
103. Wund, M. A., J. A. Baker, B. Clancy, J. Golub, and S. A. Foster. 2008. A test of the "flexible stem" model of evolution: Ancestral plasticity, genetic accommodation, and morphological divergence in the threespine stickleback radiation. Am Nat 172:449-62.