메뉴 건너뛰기




Volumn 47, Issue 15, 2013, Pages 5729-5742

An improved cellular automaton method to model multispecies biofilms

Author keywords

Biofilm model; Biomass spreading rule; Cellular automaton; Multispecies

Indexed keywords

BIOFILMS; CELLS; CELLULAR AUTOMATA; CYTOLOGY;

EID: 84884418763     PISSN: 00431354     EISSN: 18792448     Source Type: Journal    
DOI: 10.1016/j.watres.2013.06.055     Document Type: Article
Times cited : (42)

References (39)
  • 1
    • 33847334391 scopus 로고    scopus 로고
    • A multidimensional multispecies continuum model for heterogeneous biofilm development
    • Alpkvist E., Klapper I. A multidimensional multispecies continuum model for heterogeneous biofilm development. Bulletin of Mathematical Biology 2007, 69:765-789.
    • (2007) Bulletin of Mathematical Biology , vol.69 , pp. 765-789
    • Alpkvist, E.1    Klapper, I.2
  • 6
    • 0033019310 scopus 로고    scopus 로고
    • Two-dimensional simulations of biofilm development: effects of external environmental conditions
    • Hermanowicz S.W. Two-dimensional simulations of biofilm development: effects of external environmental conditions. Water Science & Technology 1999, 39(7):107-114.
    • (1999) Water Science & Technology , vol.39 , Issue.7 , pp. 107-114
    • Hermanowicz, S.W.1
  • 7
    • 0035131741 scopus 로고    scopus 로고
    • A simple 2D biofilm model yields a variety of morphological features
    • Hermanowicz S.W. A simple 2D biofilm model yields a variety of morphological features. Mathematical Biosciences 2001, 169:1-14.
    • (2001) Mathematical Biosciences , vol.169 , pp. 1-14
    • Hermanowicz, S.W.1
  • 9
    • 23944448537 scopus 로고    scopus 로고
    • Pore-scale simulation of biomass growth along the transverse mixing zone of a model two-dimensional porous medium
    • Knutson C.E., Werth C.J., Valocchi A.J. Pore-scale simulation of biomass growth along the transverse mixing zone of a model two-dimensional porous medium. Water Resources Research 2005, 41:W07007. 10.1029/2004WR003459.
    • (2005) Water Resources Research , vol.41
    • Knutson, C.E.1    Werth, C.J.2    Valocchi, A.J.3
  • 11
    • 0028986205 scopus 로고
    • Degradation kinetics of acetate and propionate by immobilized anaerobic mixed cultures
    • Kus F., Wiesmann U. Degradation kinetics of acetate and propionate by immobilized anaerobic mixed cultures. Water Research 1995, 29(6):1437-1443.
    • (1995) Water Research , vol.29 , Issue.6 , pp. 1437-1443
    • Kus, F.1    Wiesmann, U.2
  • 12
    • 0037146816 scopus 로고    scopus 로고
    • Reduction kinetics of Fe(III), Co(III), U([U+2165]), Cr([U+2165]), and Tc([U+2166]) in cultures of dissimilatory metal-reducing bacteria
    • Liu C., Gorby Y.A., Zachara J.M., Fredrickson J.K., Brown C.F. Reduction kinetics of Fe(III), Co(III), U([U+2165]), Cr([U+2165]), and Tc([U+2166]) in cultures of dissimilatory metal-reducing bacteria. Biotechnology and Bioengineering 2002, 80(6):637-649.
    • (2002) Biotechnology and Bioengineering , vol.80 , Issue.6 , pp. 637-649
    • Liu, C.1    Gorby, Y.A.2    Zachara, J.M.3    Fredrickson, J.K.4    Brown, C.F.5
  • 14
    • 3343017649 scopus 로고    scopus 로고
    • Modeling the development of biofilm density including active bacteria, inert biomass, and extracellular polymeric substances
    • Laspidou C.S., Rittmann B.E. Modeling the development of biofilm density including active bacteria, inert biomass, and extracellular polymeric substances. Water Research 2004, 38:3349-3361.
    • (2004) Water Research , vol.38 , pp. 3349-3361
    • Laspidou, C.S.1    Rittmann, B.E.2
  • 15
    • 3343015930 scopus 로고    scopus 로고
    • Evaluating trends in biofilm density using the UMCCA model
    • Laspidou C.S., Rittmann B.E. Evaluating trends in biofilm density using the UMCCA model. Water Research 2004, 38:3362-3372.
    • (2004) Water Research , vol.38 , pp. 3362-3372
    • Laspidou, C.S.1    Rittmann, B.E.2
  • 16
    • 71849106309 scopus 로고    scopus 로고
    • Cellular-automata and individual-based approaches for the modeling of biofilm structures: pros and cons
    • Laspidou C.S., Kungolos A., Samaras P. Cellular-automata and individual-based approaches for the modeling of biofilm structures: pros and cons. Desalination 2010, 250:390-394.
    • (2010) Desalination , vol.250 , pp. 390-394
    • Laspidou, C.S.1    Kungolos, A.2    Samaras, P.3
  • 17
    • 67650422587 scopus 로고    scopus 로고
    • Mineral transformation and biomass accumulation associated with uranium bioremediation at Rifle, Colorado
    • Li L., Steefel C.I., Williams K.H., Wilkins M.J., Hubbard S.S. Mineral transformation and biomass accumulation associated with uranium bioremediation at Rifle, Colorado. Environmental Science & Technology 2009, 43(14):5429-5435.
    • (2009) Environmental Science & Technology , vol.43 , Issue.14 , pp. 5429-5435
    • Li, L.1    Steefel, C.I.2    Williams, K.H.3    Wilkins, M.J.4    Hubbard, S.S.5
  • 18
    • 80053425498 scopus 로고    scopus 로고
    • Development and sensitivity analysis of a fully kinetic model of sequential reductive dechlorination in groundwater
    • Malaguerra F., Chambon J.C., Bjerg P.L., Scheutz C., Binning P.J. Development and sensitivity analysis of a fully kinetic model of sequential reductive dechlorination in groundwater. Environmental Science & Technology 2011, 45:8395-8402.
    • (2011) Environmental Science & Technology , vol.45 , pp. 8395-8402
    • Malaguerra, F.1    Chambon, J.C.2    Bjerg, P.L.3    Scheutz, C.4    Binning, P.J.5
  • 19
    • 67650720423 scopus 로고    scopus 로고
    • Modeling how soluble microbial products (SMP) support heterotrophic bacteria in autotroph-based biofilms
    • Merkey B.V., Rittmann B.E., Chopp D.L. Modeling how soluble microbial products (SMP) support heterotrophic bacteria in autotroph-based biofilms. Journal of Theoretical Biology 2009, 259:670-683.
    • (2009) Journal of Theoretical Biology , vol.259 , pp. 670-683
    • Merkey, B.V.1    Rittmann, B.E.2    Chopp, D.L.3
  • 22
    • 4344599165 scopus 로고    scopus 로고
    • Results from the multi-species benchmark problem (BM3) using two-dimensional models
    • Noguera D.R., Picioreanu C. Results from the multi-species benchmark problem (BM3) using two-dimensional models. Water Science and Technology 2004, 49(11-12):169-176.
    • (2004) Water Science and Technology , vol.49 , Issue.11-12 , pp. 169-176
    • Noguera, D.R.1    Picioreanu, C.2
  • 23
    • 0032549541 scopus 로고    scopus 로고
    • A new combined differential-discrete cellular automaton approach for biofilm modeling: application for growth in gel beads
    • Picioreanu C., van Loosdrecht M.C.M., Heijnen J.J. A new combined differential-discrete cellular automaton approach for biofilm modeling: application for growth in gel beads. Biotechnology and Bioengineering 1998, 57(6):718-731.
    • (1998) Biotechnology and Bioengineering , vol.57 , Issue.6 , pp. 718-731
    • Picioreanu, C.1    van Loosdrecht, M.C.M.2    Heijnen, J.J.3
  • 24
    • 0032485575 scopus 로고    scopus 로고
    • Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach
    • Picioreanu C., van Loosdrecht M.C.M., Heijnen J.J. Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach. Biotechnology and Bioengineering 1998, 58(1):101-116.
    • (1998) Biotechnology and Bioengineering , vol.58 , Issue.1 , pp. 101-116
    • Picioreanu, C.1    van Loosdrecht, M.C.M.2    Heijnen, J.J.3
  • 25
    • 0034609601 scopus 로고    scopus 로고
    • Effect of diffusive and convective substrate transport on biofilm structure formation: a two-dimensional modeling study
    • Picioreanu C., van Loosdrecht M.C.M., Heijnen J.J. Effect of diffusive and convective substrate transport on biofilm structure formation: a two-dimensional modeling study. Biotechnology and Bioengineering 2000, 69(5):504-515.
    • (2000) Biotechnology and Bioengineering , vol.69 , Issue.5 , pp. 504-515
    • Picioreanu, C.1    van Loosdrecht, M.C.M.2    Heijnen, J.J.3
  • 26
    • 0000237036 scopus 로고    scopus 로고
    • Modeling and predicting biofilm structure
    • Cambridge University Press, Cambridge, UK, D.G. Allison, P. Gilbert, H.M. Lappin-Scott, M. Wilson (Eds.)
    • Picioreanu C., van Loosdrecht M.C.M., Heijnen J.J. Modeling and predicting biofilm structure. Community Structure and Co-operation 2000, 129-166. Cambridge University Press, Cambridge, UK. D.G. Allison, P. Gilbert, H.M. Lappin-Scott, M. Wilson (Eds.).
    • (2000) Community Structure and Co-operation , pp. 129-166
    • Picioreanu, C.1    van Loosdrecht, M.C.M.2    Heijnen, J.J.3
  • 30
    • 0026848837 scopus 로고
    • Development and experimental evaluation of a steady-state, multispecies biofilm model
    • Rittmann B.E., Manem J.A. Development and experimental evaluation of a steady-state, multispecies biofilm model. Biotechnology and Bioengineering 1992, 39:914-922.
    • (1992) Biotechnology and Bioengineering , vol.39 , pp. 914-922
    • Rittmann, B.E.1    Manem, J.A.2
  • 33
    • 84863012754 scopus 로고    scopus 로고
    • A steady-state biofilm model for simultaneous reduction of nitrate and perchlorate - part 1: model development and numerical solution
    • Tang Y., Zhao H., Marcus A., Krajmalnik-Brown R., Rittmann B.E. A steady-state biofilm model for simultaneous reduction of nitrate and perchlorate - part 1: model development and numerical solution. Environmental Science & Technology 2012, 46(3):1598-1607.
    • (2012) Environmental Science & Technology , vol.46 , Issue.3 , pp. 1598-1607
    • Tang, Y.1    Zhao, H.2    Marcus, A.3    Krajmalnik-Brown, R.4    Rittmann, B.E.5
  • 34
    • 84863012724 scopus 로고    scopus 로고
    • A steady-state biofilm model for simultaneous reduction of nitrate and perchlorate - part 2: parameter optimization and results and discussion
    • Tang Y., Zhao H., Marcus A., Krajmalnik-Brown R., Rittmann B.E. A steady-state biofilm model for simultaneous reduction of nitrate and perchlorate - part 2: parameter optimization and results and discussion. Environmental Science & Technology 2012, 46(3):1608-1615.
    • (2012) Environmental Science & Technology , vol.46 , Issue.3 , pp. 1608-1615
    • Tang, Y.1    Zhao, H.2    Marcus, A.3    Krajmalnik-Brown, R.4    Rittmann, B.E.5
  • 38
    • 77951022506 scopus 로고    scopus 로고
    • Review of mathematical models for biofilms
    • Wang Q., Zhang T. Review of mathematical models for biofilms. Solid State Communications 2010, 150:1009-1022.
    • (2010) Solid State Communications , vol.150 , pp. 1009-1022
    • Wang, Q.1    Zhang, T.2
  • 39
    • 0042316787 scopus 로고    scopus 로고
    • Modeling kinetic processes controlling hydrogen and acetate concentrations in an aquifer-derived microcosm
    • Watson I.A., Oswald S.E., Mayer K.U., Wu Y., Banwart S.A. Modeling kinetic processes controlling hydrogen and acetate concentrations in an aquifer-derived microcosm. Environmental Science & Technology 2003, 37:3910-3919.
    • (2003) Environmental Science & Technology , vol.37 , pp. 3910-3919
    • Watson, I.A.1    Oswald, S.E.2    Mayer, K.U.3    Wu, Y.4    Banwart, S.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.