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Volumn 8126 LNBI, Issue , 2013, Pages 45-58

Faster mass decomposition

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM ENGINEERING; MEMORY CONSUMPTION; MOLECULAR FORMULA; MONOISOTOPIC MASS; RUNNING TIME; SEARCH TREE ALGORITHMS; SMALL MOLECULES; TRANSCRIPTOMES;

EID: 84884386290     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-40453-5_5     Document Type: Conference Paper
Times cited : (9)

References (26)
  • 1
    • 84884374775 scopus 로고    scopus 로고
    • Stoichiometry determination for mass-spectrometry data: The interval cases
    • Inria, Research Centre Sophia Antipolis - Méditerranée October
    • Agarwal, D., Cazals, F., Malod-Dognin, N.: Stoichiometry determination for mass-spectrometry data: the interval cases. In: Research Report 8101, Inria, Research Centre Sophia Antipolis - Méditerranée (October 2012)
    • (2012) Research Report 8101
    • Agarwal, D.1    Cazals, F.2    Malod-Dognin, N.3
  • 2
    • 0344686151 scopus 로고    scopus 로고
    • The AME2003 atomic mass evaluation (ii): Tables, graphs, and references
    • Audi, G., Wapstra, A., Thibault, C.: The AME2003 atomic mass evaluation (ii): Tables, graphs, and references. Nucl. Phys. A 729, 129-336 (2003)
    • (2003) Nucl. Phys. A , vol.729 , pp. 129-336
    • Audi, G.1    Wapstra, A.2    Thibault, C.3
  • 3
    • 58349086772 scopus 로고    scopus 로고
    • SIRIUS: Decomposing isotope patterns for metabolite identification
    • Böcker, S., Letzel, M., Lipták, Z., Pervukhin, A.: SIRIUS: Decomposing isotope patterns for metabolite identification. Bioinformatics 25(2), 218-224 (2009)
    • (2009) Bioinformatics , vol.25 , Issue.2 , pp. 218-224
    • Böcker, S.1    Letzel, M.2    Lipták, Z.3    Pervukhin, A.4
  • 5
    • 34547463620 scopus 로고    scopus 로고
    • A fast and simple algorithm for the Money Changing Problem
    • Böcker, S., Lipták, Z.: A fast and simple algorithm for the Money Changing Problem. Algorithmica 48(4), 413-432 (2007)
    • (2007) Algorithmica , vol.48 , Issue.4 , pp. 413-432
    • Böcker, S.1    Lipták, Z.2
  • 6
    • 49549101405 scopus 로고    scopus 로고
    • Towards de novo identification of metabolites by analyzing tandem mass spectra
    • Proc. of European Conference on Computational Biology (ECCB 2008)
    • Böcker, S., Rasche, F.: Towards de novo identification of metabolites by analyzing tandem mass spectra. Bioinformatics 24, I49-I55 (2008); Proc. of European Conference on Computational Biology (ECCB 2008)
    • (2008) Bioinformatics , vol.24
    • Böcker, S.1    Rasche, F.2
  • 7
    • 79953740494 scopus 로고    scopus 로고
    • Fix the antibiotics pipeline
    • Cooper, M.A., Shlaes, D.: Fix the antibiotics pipeline. Nature 472(7341), 32 (2011)
    • (2011) Nature , vol.472 , Issue.7341 , pp. 32
    • Cooper, M.A.1    Shlaes, D.2
  • 8
    • 84855805908 scopus 로고    scopus 로고
    • Myxoprincomide: A natural product from Myxococcus xanthus discovered by comprehensive analysis of the secondary metabolome
    • Cortina, N.S., Krug, D., Plaza, A., Revermann, O., Müller, R.: Myxoprincomide: a natural product from Myxococcus xanthus discovered by comprehensive analysis of the secondary metabolome. Angew. Chem. Int. Ed. Engl. 51(3), 811-816 (2012)
    • (2012) Angew. Chem. Int. Ed. Engl. , vol.51 , Issue.3 , pp. 811-816
    • Cortina, N.S.1    Krug, D.2    Plaza, A.3    Revermann, O.4    Müller, R.5
  • 9
    • 33751327221 scopus 로고
    • Calculation of elemental compositions from high resolution mass spectral data
    • Dromey, R.G., Foyster, G.T.: Calculation of elemental compositions from high resolution mass spectral data. Anal. Chem. 52(3), 394-398 (1980)
    • (1980) Anal. Chem. , vol.52 , Issue.3 , pp. 394-398
    • Dromey, R.G.1    Foyster, G.T.2
  • 10
    • 0011509885 scopus 로고
    • A computer program for the computation of the molecular formula
    • Fürst, A., Clerc, J.-T., Pretsch, E.: A computer program for the computation of the molecular formula. Chemom. Intell. Lab. Syst. 5, 329-334 (1989)
    • (1989) Chemom. Intell. Lab. Syst. , vol.5 , pp. 329-334
    • Fürst, A.1    Clerc, J.-T.2    Pretsch, E.3
  • 11
    • 49049121462 scopus 로고    scopus 로고
    • Mass spectral metabonomics beyond elemental formula: Chemical database querying by matching experimental with computational fragmentation spectra
    • Hill, D.W., Kertesz, T.M., Fontaine, D., Friedman, R., Grant, D.F.: Mass spectral metabonomics beyond elemental formula: Chemical database querying by matching experimental with computational fragmentation spectra. Anal. Chem. 80(14), 5574-5582 (2008)
    • (2008) Anal. Chem. , vol.80 , Issue.14 , pp. 5574-5582
    • Hill, D.W.1    Kertesz, T.M.2    Fontaine, D.3    Friedman, R.4    Grant, D.F.5
  • 15
    • 67650436176 scopus 로고    scopus 로고
    • Drug discovery and natural products: End of an era or an endless frontier?
    • Li, J.W.-H., Vederas, J.C.: Drug discovery and natural products: End of an era or an endless frontier? Science 325(5937), 161-165 (2009)
    • (2009) Science , vol.325 , Issue.5937 , pp. 161-165
    • Li, J.W.-H.1    Vederas, J.C.2
  • 18
    • 79959622504 scopus 로고    scopus 로고
    • MS/MS data improves automated determination of molecular formulas by mass spectrometry
    • Meringer, M., Reinker, S., Zhang, J., Muller, A.: MS/MS data improves automated determination of molecular formulas by mass spectrometry. MATCH-Commun. Math. Co. 65, 259-290 (2011)
    • (2011) MATCH-Commun. Math. Co. , vol.65 , pp. 259-290
    • Meringer, M.1    Reinker, S.2    Zhang, J.3    Muller, A.4
  • 19
    • 84861147702 scopus 로고    scopus 로고
    • Highly accurate chemical formula prediction tool utilizing high-resolution mass spectra, MS/MS fragmentation, heuristic rules, and isotope pattern matching
    • Pluskal, T., Uehara, T., Yanagida, M.: Highly accurate chemical formula prediction tool utilizing high-resolution mass spectra, MS/MS fragmentation, heuristic rules, and isotope pattern matching. Anal. Chem. 84(10), 4396-4403 (2012)
    • (2012) Anal. Chem. , vol.84 , Issue.10 , pp. 4396-4403
    • Pluskal, T.1    Uehara, T.2    Yanagida, M.3
  • 21
    • 79951640091 scopus 로고    scopus 로고
    • Computing fragmentation trees from tandem mass spectrometry data
    • Rasche, F., Svatoš, A., Maddula, R.K., Böttcher, C., Böcker, S.: Computing fragmentation trees from tandem mass spectrometry data. Anal. Chem. 83(4), 1243-1251 (2011)
    • (2011) Anal. Chem. , vol.83 , Issue.4 , pp. 1243-1251
    • Rasche, F.1    Svatoš, A.2    Maddula, R.K.3    Böttcher, C.4    Böcker, S.5
  • 22
    • 0017519787 scopus 로고
    • MASSFORM: A computer program for the assignment of elemental compositions to high resolution mass spectral data
    • Robertson, A.L., Hamming, M.C.: MASSFORM: a computer program for the assignment of elemental compositions to high resolution mass spectral data. Biomed. Mass Spectrom. 4(4), 203-208 (1977)
    • (1977) Biomed. Mass Spectrom. , vol.4 , Issue.4 , pp. 203-208
    • Robertson, A.L.1    Hamming, M.C.2
  • 24
    • 84877343392 scopus 로고    scopus 로고
    • Computational mass spectrometry for small molecules
    • Scheubert, K., Hufsky, F., Böcker, S.: Computational mass spectrometry for small molecules. J. Cheminform. 5, 12 (2013)
    • (2013) J. Cheminform. , vol.5 , pp. 12
    • Scheubert, K.1    Hufsky, F.2    Böcker, S.3
  • 25
    • 84872336476 scopus 로고    scopus 로고
    • Automatic recalibration and processing of tandem mass spectra using formula annotation
    • Stravs, M.A., Schymanski, E.L., Singer, H.P., Hollender, J.: Automatic recalibration and processing of tandem mass spectra using formula annotation. J. Mass Spectrom. 48(1), 89-99 (2013)
    • (2013) J. Mass Spectrom. , vol.48 , Issue.1 , pp. 89-99
    • Stravs, M.A.1    Schymanski, E.L.2    Singer, H.P.3    Hollender, J.4
  • 26
    • 0004251247 scopus 로고
    • 2nd edn. Academic Press Freely available from
    • Wilf, H.: generatingfunctionology, 2nd edn. Academic Press (1994), Freely available from http://www.math.upenn.edu/~wilf/DownldGF.html
    • (1994) Generatingfunctionology
    • Wilf, H.1


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